KEGG   Neodiprion lecontei (redheaded pine sawfly): 107220360
Entry
107220360         CDS       T09006                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013  Nucleocytoplasmic transport
nlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107220360
  09122 Translation
   03013 Nucleocytoplasmic transport
    107220360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nlo03019]
    107220360
   03041 Spliceosome [BR:nlo03041]
    107220360
Messenger RNA biogenesis [BR:nlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107220360
Spliceosome [BR:nlo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107220360
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_WDR3_2nd NBCH_WD40 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 WD40_Gbeta Beta-prop_TEP1_C DSE1_N Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd BBS2_Mid
Other DBs
NCBI-GeneID: 107220360
NCBI-ProteinID: XP_046601681
UniProt: A0ABM3GN34
LinkDB
Position
7:5738967..5741410
AA seq 335 aa
MLEQKSCGMNEKSFYNTVQCQTFSADGNYLLAGNIYGDVSVYELSKVLGPYHGDDCDPRG
PNYQFTAYKQQQVHSIIATDKFLITGTVGEISGWDWKVVTSNKVSKIKVSWTIHIPTVKD
SYVKPDVNYMLISHEDNILHAGCGDNKIYTFSLEDGKLLRTLEGHEDFIHALSILGNQLA
SASEDGSVRLWDMRKKENTNVVKPFLADKVNRPKLGKWIGTVDFTEDWLLCGGGPKLALW
HMRTMEVATIFDLPDQGIHLGSIHEERIIAGGAMPNVHHLTYQGEVLAEVPTSSNTIYSI
VHQESPQKLLSMAGSSNNIDICTNFSYREMVLKFA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgctagaacaaaaatcgtgcggtatgaacgagaaatcattttacaacactgttcaatgt
caaactttttctgccgatgggaattatttattagctgggaacatatatggcgacgtttct
gtctatgagttgtctaaggtactgggtccctatcatggagatgactgtgatccaagaggg
ccgaattatcaattcactgcgtataaacaacaacaagttcacagcattatagcaactgat
aaatttctgattaccggaacggtaggagaaatatctggatgggactggaaggttgtgact
tccaataaagtatctaaaattaaagtttcctggacgattcacataccaaccgttaaggac
agctacgttaagccagatgtcaactacatgctaatttcacacgaagacaacatattacat
gctggttgcggtgataataagatatatacgttcagcttagaagatggaaaattactcaga
acacttgaaggtcacgaggatttcatccatgctctttcaattttaggaaatcagctggca
tctgctagtgaagatgggtcagtaagactgtgggatatgagaaaaaaagaaaacacaaat
gtcgtgaagcctttcttagcagacaaagtgaacagacccaagctcggcaagtggattgga
actgttgattttacggaagattggcttctctgtggaggtggtccaaaattggctctctgg
cacatgcgaactatggaagtggctactatatttgacttacctgaccaaggtattcacctt
ggatctattcacgaggagagaattattgctggaggagcaatgccaaacgtccaccatctc
acttaccaaggagaagtgttagctgaagttccaacatcgagcaatacaatttattctatt
gttcatcaagagagtccacaaaaattattgagtatggctggatcaagcaataatattgac
atttgtacaaatttcagttacagagaaatggtactgaaatttgcttga

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