Neodiprion lecontei (redheaded pine sawfly): 107220416
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Entry
107220416 CDS
T09006
Name
(RefSeq) PHD finger protein rhinoceros isoform X1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
KIAA2026_hel
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
107220416
NCBI-ProteinID:
XP_015514494
UniProt:
A0A6J0BI93
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All DBs
Position
2:561094..571927
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AA seq
2243 aa
AA seq
DB search
MFPTFIGILDIQSWWEVPSIAHFCSLFRAAFNLLDFDIEDLEEALLTDGGTEGRLLQELI
VRLLEGCLPNDTRNDISTFNYQMFLRRLFRKKCQEYGRDNPFNTDVDFELLPLRQKVEIL
RALCDFRLDAEDVEQSLDNLDSDSLRVEPLGHDRKNSAYWYFYGTRLYREDYIVQTKPDI
LRKQKGKLKDKRRKRRGRNRISQTEETKEETEQDSLLYEGLENGVLPTEKETIWQVVCFT
HQDWSRLVEKFKNSEDDSERKLYRTLSEDFMPEIPRLFELKEKQQRHRLLQQNSTRVLRR
RETTNRVEAAMVRAKAKAKIKGVKKSNSRSLKVIEEINQVSPTPSATATPVPKKGRQTNN
SLASAVGQIVIHTEDELESLTGRRGGNRSGGGITSYHPSRYEYGVEEEERRVGMHKILES
LKDHQDAWPFVDPVDEEYAPRYYSVVRKPMDLTTMEEKLEGGSYRSLGQFKRDFQLIVDN
CRQYNGSDNEYTEMAINLQEVFDRAVDRYLESEQSSDEDPSIQVSLSPVSMCPASPSLTT
KIILPQNSRKRNRNSVKKLKLSKSDKAKKDKYTSLEEPKSVEMEENVALRSKRVKEKKNG
KRAKRIKVEEVESDSENEITFSLAKRENQSDVEVCKMKTKQKKTVNFERVSSKVKKASPK
EEQPDDSKRKSKKELKVQNEEIEDCEHDSQEILKSPARNRSKKSLKKELGDLLTKAKKSK
KSDVKKNSVTFKANGKQETFETNEKIKKNHSKKDSSEKKVIPVVCRESTITDTERPKGKD
KKLKQYREKDLKGSVLKNSAQKKDSHKLEKKEDDTKYKKLVTSNKDLESLDSLKDIISER
QREDKLKAQIEGEKQKKSIKKDSLHSRKVPSNGSCLRTVSKIDAIHLRSKDGPKDEPVKK
SKLAQVKRSRGFKKEDSPGIQALNQATEQTLNDINKWLDDAPRLSEFSSGSDSPVFHPAT
NEVVKAAMKTEMTRKRPHPAKLVGSQGPTRAKKVQRTIDRLQPGKSKGNLLKKPPHLPAN
ISSDVPAHQTTADANKAKSDGSYEPKLSLGTVLRNAESIHSICKSLVSSPNPNLIDDDDE
ERTTRPTSALENQGAVDQTDKLFSGKEMAESKTTPKIESLDNEGNTAVEEVQKPKSATPN
LSAWFKAFGAPKSKKKEDDADENATADSNCKKETENEIQEVKTIRQRRMSTGGSSISESV
SSFSQESPPGQSPQTQTPHVPNETPVRGAGFYQDALSSGSSPYNSPYYATPPRYSAQLPP
TPSPQNNPSSPVYPVAAPYEQTSSLYPQTTPQTSQQVYPKHSPLQGATESYRQPSPSAFS
QRSPQRIPFPQNSPQGQSFLPALPPSVQNTASPYPRSPQPSQQIYPQSSPQPPANYSQPS
PQQATNYSQPSPQQPPTPNYSQPSPQQPASFSQPSPQLPTNYSQPSPQTPANYSQTSPQQ
PSSYSQNSPQPPQTYSQPSPQPPPNYSQTSPQQPSNYSQPSPQQPPSYSQPSPQQPSSYS
QPSPQQRPSYSQTSPQQPPSYSQPSPQQPPSYSQSSPQQPPPNYSQPSPQQPVPGYSQPS
PQQPSTFSQPSPQQTTASNFPQNSPQQRTGYSQPSPHQPANYSQSSPQPSASYSQPSPQQ
ACNYSPTAPSQGSNYQQGAASSYSQSFPQSPSYSRNETQGSYLQPSPAPSLISETDQRAD
YQKTREVKTPAVEQQSNFSSENEGQSVNQQGFQSGEQFPPASFINSYQTPSFDRNVTLPP
RVSDQQQHDRHAFPSPSDSLNIHKYAQPITQQRGFGCKTSTSGDQSQVTTDQAQLLTFQQ
NLATHESLYQTSAGFQAPTYPVPNPSHRPVYPSPHYFDSSGKVGNNSNSGSNIAPVKKRS
YSEQPDGPRNFSQETQRIQDQFGFDAMMTLSQSDPGPGSQFDGNLNSIVDSMASNSAYAR
LGLGLVGRTTGKEQQLLNIPRPPSKPDPITYARTTGAASDVELNLLQSLNATKSTGIVPV
SRRATDKTPTSYGPNTAPTVTTSKPKKSRKTKQQQQQQQQQQQNAALIPSSIDQQSALGI
SGFHQFATSQTDPIALKNPSVVTPGASAFNFAAPGTTTNAAPFYDKDATAAAFAFLDEIR
NPSNYYTMALRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQ
VANSSLESAPVNSNKLSNQPSHNYPPPNPFLHSQRTTAYGPPVPPYVSPHGPNLSVDPAA
YQQYLRSFYALPPPPHHHRPSWL
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgactttcatcgggattttagacattcaatcgtggtgggaggtgccaagtatc
gcacatttctgctcattgtttagggctgccttcaatctgctggactttgacatcgaggat
ttggaagaagctcttctcacagacggcggtacagaaggccggctattgcaagaactaatt
gtcagattacttgaaggctgtctaccaaatgacactcgcaatgacatctctacttttaat
tatcagatgttcctccgtagactctttagaaaaaagtgtcaagaatatggaagagataat
cctttcaatacggatgtagactttgagcttttgccactacgccaaaaggtagaaattctt
cgggctctctgtgacttcaggcttgacgctgaagacgtggagcagtctctcgacaatttg
gactcggacagcctacgagtcgaaccactaggtcatgatcgtaaaaattctgcctactgg
tacttttacggcactcgactgtatcgggaagattacattgttcaaacgaagcctgatata
ttgcgtaaacaaaaaggaaaactcaaggataaaaggcgaaagagacgtggcaggaaccga
atcagtcagacggaggaaacgaaagaagagacggaacaagatagtttgttgtacgaaggg
ttggaaaacggggttttgccaacagaaaaagagactatctggcaagttgtctgtttcacc
caccaggactggagccgtctggtcgaaaaatttaaaaattcggaggacgactcagaacgt
aaactgtaccgtactttatccgaggacttcatgccggaaatcccaagattatttgaatta
aaagaaaaacagcagagacatagacttctacagcaaaacagcacaagggtactacgtcga
cgcgaaacgacaaatcgagtggaagcagccatggtcagggccaaagcgaaggctaaaata
aagggggtgaagaagagtaacagccgaagtttgaaagttatcgaagaaatcaatcaagta
tcacctacaccctcagcaacagcaacaccggtaccaaagaagggaaggcagactaacaac
tctttggcctctgccgttggtcagattgtcatccatacagaagatgagttagagagtttg
accggacggagaggtggcaatcggtccggtggtgggataactagttatcacccttctcgg
tatgagtatggcgtcgaagaagaagaacgccgtgttggcatgcataaaatccttgaaagt
ctgaaagatcaccaagatgcttggccattcgttgaccctgttgacgaagaatacgctcca
aggtactacagtgtcgttcgaaagcctatggatctcaccacaatggaagaaaagctcgag
ggtggatcgtataggagtctaggccagttcaaacgtgatttccagttgattgttgacaac
tgccgtcaatacaacggctctgacaatgagtacacggagatggcgatcaacctacaagaa
gtctttgatcgtgcggtcgatcgataccttgaatctgagcaatccagcgacgaagatcct
tctattcaagtgtcattatcacccgtttcgatgtgccccgcatccccgtctttgactacg
aaaataattttgcctcagaattcgcgaaaacggaatcgcaactcagtaaagaaactcaag
ttgagcaagtctgataaagcaaaaaaagataaatatacgagtttagaggaaccgaaatct
gtggagatggaagaaaacgttgccttaagatctaagcgggtaaaagaaaaaaagaatggt
aaacgtgcaaaaagaattaaggtagaagaggttgagagtgactctgaaaatgaaataact
ttttccctagcgaagagagaaaatcagtccgacgttgaagtgtgtaaaatgaaaacaaag
caaaaaaaaactgtgaactttgaacgtgtgtcatcaaaagtgaagaaagcctcacccaaa
gaagagcagccggacgattctaagagaaaaagcaaaaaagaattgaaagtgcagaatgaa
gagattgaagactgtgaacatgattctcaggaaatattgaaatccccagccaggaacaga
agtaaaaaaagcttaaaaaaggaacttggcgacttattgactaaagcaaaaaagtccaag
aaatctgacgtcaagaaaaattctgtcacatttaaagccaatggtaaacaggaaacattc
gaaacgaatgagaaaataaaaaaaaatcatagtaaaaaagacagcagcgaaaaaaaagta
attccagtagtctgcagagaaagtacaatcaccgatacagaacgaccaaagggaaaagac
aaaaagttaaaacaatatagagaaaaagacttgaaagggagcgtattgaaaaattcggcc
caaaaaaaggacagtcataagctagagaaaaaggaagatgacaccaagtacaagaaactc
gtaactagtaataaagatttagaatctcttgacagcctaaaggacataataagcgaaaga
caacgcgaggataaattgaaggcccaaatcgaaggggaaaagcaaaagaaatctataaag
aaagacagtttacattctagaaaagtgccttcaaacggtagttgcttacgcacagtcagt
aaaatagatgcaatacatttacggtcaaaggatggtcctaaagatgaaccagtaaaaaaa
tcaaagctggcccaggtaaagcgatccagaggatttaaaaaggaagacagccccggaatc
caagccttaaatcaagctacggagcagacgttaaacgatatcaataagtggttggacgat
gcgcctcgcctgtccgaattttcttcgggtagtgactcaccggtatttcatccagcaacg
aacgaagttgtaaaggcagcaatgaaaactgaaatgacaagaaaacgtcctcatcctgca
aaacttgtgggttctcaagggcccacgcgtgcaaagaaagtccagcgtacaattgatcgt
ttgcaacctggaaaaagcaaaggtaatttgttgaaaaaaccgcctcatttacctgctaac
atcagcagtgatgtaccggcgcatcaaaccacagctgacgccaataaagcaaaatctgat
ggcagctatgaaccaaaacttagtttgggcacagttctcaggaatgctgaatccattcat
tcgatttgtaaaagtctcgtgtcgtctcccaatcccaatttaatcgatgacgatgatgag
gaacgaacaacaagacctacttctgcattagaaaatcagggagctgtagatcagactgac
aaattgttttctggtaaggagatggcagaatctaaaaccactccaaagatagaatcactg
gacaatgaaggtaatacagcagtagaagaagttcaaaaaccaaaatctgcaactccaaac
ctcagtgcatggttcaaggcgttcggtgcacccaagtccaaaaaaaaggaagatgacgcc
gatgaaaacgcgaccgcggattccaactgcaagaaggaaacggaaaacgaaatacaagaa
gtcaagaccatcaggcaaaggaggatgagtaccggcggtagcagtatcagcgagtccgta
tccagcttttcacaggagtctccgcctggtcaatcaccgcaaacgcaaactccgcatgtt
cccaacgaaacccctgtcagaggtgcaggcttctatcaggacgctttgtcgtcgggtagc
agtccgtacaatagcccttattacgcgactcctcccaggtacagcgcacagctcccccct
actccttcaccgcaaaataatccgtcgtcaccagtctatcccgtcgcagctccctacgaa
cagacgtcgtctctgtatccccagacaactcctcagacctcccagcaagtttatccaaaa
cattcccctcttcaaggtgcaacggaatcttatcgtcagccatccccttccgctttttcc
caaaggtcaccgcagagaataccgtttccgcaaaattctccccaaggtcaatcgtttctg
ccggcattaccaccttcggtacaaaatacagcgtctccataccctcggtcaccccaacct
tcccaacaaatatacccgcaaagttctccacaaccgccggcaaattattctcaaccatca
cctcagcaggcaaccaattactcccaaccctcgcctcagcaacctccgactccgaattat
tcacaaccttcaccccaacaacctgccagcttttcacaaccttccccgcaactaccgacc
aattattctcaaccttcgccgcagacgcctgcgaattattcgcaaacctcaccacagcaa
ccctcaagttactcacaaaattccccacaaccaccccagacttattcccaaccgtcgccc
caaccacctccaaattattctcaaacttctccgcaacaaccatctaactattcgcaacct
tctccccaacaacctcccagctactctcaaccgtcaccgcaacaaccatcgagctattcg
caaccatcaccacagcaaagaccgagctactcgcaaacgtctcctcagcaaccgccaagt
tactcgcagccctcgccccagcaaccacccagttattcacaatcatcgccccaacaacct
cctccgaattactctcaaccgtcacctcaacaacctgtgcctggctactcgcagccttcg
ccacaacaaccctcgacgttctcgcaaccttcaccacagcaaactactgcctcgaatttc
ccacagaattctccacaacagcgaactggatactctcaaccatcgccgcatcaacctgct
aactactcacagtcgtcacctcagccatctgcaagctactcgcaaccttctccgcaacag
gcctgtaactattcgccaactgccccatcccagggctcaaattatcagcagggagcggct
tcttcatactctcaaagttttcctcagagtccgtcttactcgcgaaacgagacacaaggg
tcttatctacagccgtcgcctgctccgagtctaatcagtgaaactgaccagagagcggat
taccaaaaaacacgggaggtgaaaactcccgctgtggaacagcaatcaaacttttcgagt
gaaaatgaagggcaaagcgttaatcagcaagggtttcagtccggtgaacaatttccacca
gcatctttcataaacagttatcaaacaccaagcttcgacagaaatgtcactttaccacct
agagtatcagatcaacagcaacacgatcgacacgcttttcccagtcctagtgatagtttg
aatattcataaatatgcccaacccatcacacaacaacgaggattcggatgcaaaacgtcg
acttctggtgatcagtcacaggtgactacagatcaggcacaacttttgacctttcaacaa
aatcttgccactcacgagtcactttaccaaacatcagccggatttcaggctcctacatat
cccgtgccaaatccaagccacaggcccgtctatcctagtccacattattttgactctagt
ggcaaagttggtaacaatagtaacagtggcagtaatattgcacctgtgaagaaacgaagc
tacagcgaacaacccgatggcccacgaaacttttctcaggaaactcagcgaatccaagat
caatttggttttgatgcaatgatgacattgtctcagtcagacccaggacctggcagccag
tttgacggaaaccttaattcgatagttgattccatggcttcaaattcagcttatgctcgg
ctaggcttagggcttgtaggacggactactggaaaagaacaacaacttttgaatattcca
agaccaccgtcaaaacctgatccaattacttatgccaggactactggagctgcctcggat
gttgagttgaacctattacaaagcttgaatgccacaaagagtacaggaatcgttccagtt
tcacgcagggcaactgataagacaccaacttcttatggaccaaatactgcgcccactgtt
actacaagcaaacctaaaaagagtagaaagactaagcagcaacagcaacaacagcagcag
caacaacaaaatgcagccctaatcccatcaagtatcgatcagcagagtgctctagggatt
tcaggctttcatcaattcgctacaagtcaaacggatccaattgcattgaaaaacccttct
gttgtcacacctggcgctagtgcattcaattttgcagctccgggtactacaacaaatgct
gctccattttatgacaaggatgcaacagcggcagcttttgccttcctcgatgaaatacga
aatcctagcaactactataccatggcattgagacagcagcagcaacaacaacagcagcag
cagcagcagcagcagcaacagcagcagcaacagcagcagcagcaacagcagcagcaacaa
cagcaacaacagcagcagcagcagcagcaacagcaacaacaacatcagcaacaacagcaa
gtagctaattcctcactagaatctgctcctgtcaacagcaataagctcagtaatcaacca
tctcataattatccacctccgaatccattcttacactcacaaagaacaactgcctatgga
ccaccagttccgccctacgtttcgccacacgggcctaacttaagcgtagatccagcagct
tatcagcaatatcttcgttcattttacgcgttaccgccaccacctcatcatcacaggcct
tcttggctctag
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integrated database retrieval system
