Neodiprion lecontei (redheaded pine sawfly): 107220577
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Entry
107220577 CDS
T09006
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107220577
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nlo00535
]
107220577
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107220577
Meiosis-specific proteins
Cohesin complex and associated proteins
107220577
Proteoglycans [BR:
nlo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107220577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
FtsK_SpoIIIE
ABC_tran
DUF6827
Motif
Other DBs
NCBI-GeneID:
107220577
NCBI-ProteinID:
XP_015514720
UniProt:
A0A6J0BJ46
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Position
5:complement(20858486..20869514)
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AA seq
805 aa
AA seq
DB search
MHIKQVIIQGFRSYKEQTIVGPCDPGHNVIVGRNGSGKSNFLQAIQFVLSDEYAHLGSNA
QSLLHESLGPRVISAYVEIIFDNFDRRLPIERNEVSLRRVIGSKKDQYFLSGKLVNRNEV
MNLLESAGFSKCNPYYIVKQGKINEMAMASDSRRLKLLQDIAGTRVYDSKRNESNSLLKE
TQGKIVKIEDLLITLAEQLKNLDGEKEELKEYNRLDKIRRCLEYIIYDRELKSLKEKLEE
FEETRHACNVVQAELEADAKTAEEAARSAAKKLKELKREARAEKDQLDRLNADHQQLLKE
KMKLRLTIQDLKIEVSGDCKAKEKAEEELNALRVKIKKSEQDMEKIRPEYEIVKQREQEY
SRELAMNERKRKELYVKAGRVTLFKTKEERNKWIKSELDQLRGHIVEKETYRAALAEDLK
VDKDKYADLEKKIAEPAKDVKDHMKSIEERSKNYKELILQKNQCQARIKDLYRRFSVLEQ
RQNELKEDMTKQDQLLRRVVGKSTLNAIDSVRKVLNTFRERGDSEDELQSYYGLLVDTFQ
CGEALHTAVEVSAGNRLFYHVVESNVLASKILSEMNKQRLPGVADFMPLDRLLVRRVDYP
KNSDAIALISQLNYDPKYDRAIRFVFGRTLIARNLGTAVALARSSGLDCVTLEGDQVSPR
GMITGGHFNAKQSRLNIYKLRTKLKTASELKTVTDEIANVEQEIEATNESLNFCIAGVQK
IELKDRISKDIIDNSTANIRLLREELEIVEKSRTSKMQILAQCSNDLEALNATKESLENE
FNQELAIELSEEDQKKASKKGSIIL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaaacaggttataatacagggcttcagatcctacaaggagcaaactatcgtc
ggtccctgtgaccctggacacaatgtcattgtgggcaggaacggatcaggaaagagcaat
ttccttcaagctattcagtttgttcttagtgacgaatatgctcacctgggttccaacgcc
caatctcttctccacgagagtttgggcccacgagttatttcagcctatgttgaaatcatt
tttgacaattttgacagacggctgccgattgaaaggaacgaggttagtttaaggagagtg
atcggctctaaaaaggatcagtattttctgagtgggaaactggtgaaccgtaacgaagtt
atgaacttgctggaatccgcgggattctctaaatgcaatccatactacatagtgaaacag
ggaaagataaatgaaatggcaatggcgtcggactctcgaagattgaaacttcttcaagac
attgctggaacccgagtttatgactccaaacgaaacgagtcgaactctctcctcaaggag
acgcagggaaaaatcgtaaagattgaggatttacttataaccttagccgagcaattgaaa
aatttggacggagaaaaagaggagcttaaagagtacaatcgtttggacaagattcgtaga
tgtttggagtatattatttacgatcgggagctaaaatcgttgaaggagaaactagaagag
ttcgaagaaactcgccacgcgtgtaacgtggtacaagcagaacttgaagctgacgcaaaa
acagccgaggaggctgctcgctctgccgcaaagaaattgaaggaattaaagagggaagct
agagcggaaaaagatcaactcgacaggctaaatgctgatcatcagcaactgctcaaagag
aaaatgaagttgagattgacgatacaagacttgaagattgaagtcagtggcgactgcaag
gccaaagaaaaagccgaggaagagttgaatgcgcttagagtaaaaatcaagaagtctgaa
caagatatggagaagatcagacctgagtatgagattgtaaaacaacgcgagcaggaatac
agcagggaattggcaatgaatgaacgaaagcgcaaggagctttacgtcaaagcaggcaga
gtgaccttgtttaaaaccaaggaagaaagaaataaatggataaaatctgaattggatcag
ctgagaggacacatcgttgagaaagaaacttatcgcgcagcgctagctgaggatttaaaa
gtagataaggataaatacgctgatcttgagaaaaaaatcgcagagcccgcaaaagacgtg
aaagatcatatgaaaagtatcgaagagcgcagtaaaaactacaaagaactaatattgcag
aaaaatcagtgccaagcgagaatcaaggatctataccgccgattcagtgtgctagagcag
aggcaaaatgaattaaaagaagatatgacaaagcaagatcaactcttgagacgggtcgtt
ggtaagtcgacgttgaatgcaatagacagcgttcgcaaagtgctgaacacgtttcgcgag
cgcggtgattcggaggacgaattgcaatcctactacggactcttagtggatacttttcaa
tgcggagaagctcttcacacggcggtcgaggtgtccgcaggaaatagactgttctatcac
gtcgtcgaatccaacgtactcgcttccaaaattcttagcgaaatgaataaacaacgattg
cccggcgttgctgatttcatgccgttagatcgtcttttggtacgacgcgtcgattatccc
aaaaacagcgacgcgattgcactgatctctcaactaaattatgatcccaaatatgacaga
gctatcagattcgtttttgggcgaactttaattgccagaaatttagggacggccgtggct
ttggctcgctcttcgggattagactgcgtcactttagaaggcgaccaagtttcccccagg
ggaatgatcactggaggccactttaacgcaaagcagtctcgtctgaatatatacaaattg
agaaccaagctcaaaactgcctcagagctcaaaactgtcacagatgaaatcgcaaatgtc
gaacaggagatcgaggccaccaacgaaagtttgaatttttgcatcgcgggcgtacagaaa
atcgaactgaaagacagaatctcgaaagatataatagacaactcaacggccaatataaga
ctgctgagagaggaactcgagattgtcgaaaaatctcgtacgtcaaaaatgcaaattttg
gcgcaatgctccaatgatctcgaagcgttgaacgcgactaaggagagtctagaaaatgaa
ttcaaccaggaactggcaattgagctgtccgaagaagaccaaaagaaggcaagcaaaaag
ggatcgattattttataa
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