Neodiprion lecontei (redheaded pine sawfly): 107220965
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Entry
107220965 CDS
T09006
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107220965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107220965
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107220965
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF3209
ATG16
Motif
Other DBs
NCBI-GeneID:
107220965
NCBI-ProteinID:
XP_015515276
UniProt:
A0A6J0BKW5
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Position
5:1901685..1904592
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AA seq
587 aa
AA seq
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MNYTFGAQNPNTQAGFTPGTTAPPVTGGAQPVTFGTSAVGAGDANKQGTLGLAQPGGHPL
SKSIGQAFSTSFGTATFGASPATAPAFGTPSSGTTGFARSGSGLMGLATPQQQAITASSL
PAANTAAPAGALTYGTPISAATTTNASVGFRTTTLPNTSSGLGTLAMPSSTHGLSFGAKP
MTTSALTFNLASTAATSGQPPASNISFGVPKTVATTTIARPASQSFTVPAASTPASGFTT
GVGTTPAATSATGFSLFNTPQIAPSTAVAPTATATPTASAASGFNLPGSQTQAAKTTGTS
LGLGSMATIAPATAATGFSTGTPASSGIFTLGSMPSVTAATSFNSGGTTTVASTPGFTLA
KSTDPAASTAAPTSAPQTSLETTTNVTASTAATSQPGGLNFCQLEESINKWTLELEEQEK
AFVNQATQVNAWDRLLIANGEKIVTLNQEVERVKLEQEQLEHELDYVVGQQRELQDCLVP
LEKELATVSASDPEREYTYRLAENLDTQLKQMSEDLKEIIEHLNEANRSQDSSDPIVQIG
KILNAHMNSLQWLDQRTSVLQTKIQQIDQMHQNFRQEHERSFNLAYN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaattatacatttggcgctcagaatccgaatacccaggctgggttcaccccaggaact
actgccccgcctgtcacaggaggagcacaaccagtcacctttggaacatcagcagtaggc
gccggcgatgccaacaagcaggggacactgggcctggctcagccaggaggacaccccttg
tcgaaatctattggccaggcatttagtacgagttttggaacagcaacatttggagcctct
cctgcgacagctccagcattcggtacaccgtcctctggaacaactgggtttgcaagatca
gggtcaggattaatgggccttgcaactccgcagcagcaagcaataacggctagcagtctc
cctgcagcaaacacagcggctccagctggggctctgacctatggaacaccgatcagtgca
gcaacaacgactaatgcatcagtaggtttccgtactacgactcttccgaatacaagctca
ggtcttggcaccctagcgatgccttcgtctacgcatggtttaagctttggtgcaaaacct
atgacgacctctgctcttactttcaatttggcatcgactgctgccacatctggccaacca
ccagccagcaacataagctttggtgttccaaaaacagtcgctactaccaccattgctcgc
ccggcaagtcagagcttcacagtacctgctgcatctacaccagcatcaggattcacaacc
ggagttggcactactccagctgcgacaagcgctacaggcttcagtctctttaacactccg
caaattgccccaagtaccgcagtggctcccactgctaccgctacgccaaccgcaagcgct
gccagtggatttaatctacctggctcgcagacgcaagcagctaaaacaactggaactagc
cttggcctcggtagtatggcaactattgcacctgctacggctgcaactggattttccaca
ggaactccagcttcctcgggtatcttcacgctcggtagtatgccctctgttacggctgca
accagtttcaattcgggtggtacaacaacggttgcgagcactccaggattcactctagca
aagagtacagatcctgccgcttcgactgcggcacctaccagcgcaccacaaacatctttg
gagaccacgaccaatgttacagcctcgacggctgcaacaagtcaaccaggtggattaaat
ttctgtcaattggaagaatcgataaataaatggacactggaactagaggagcaggaaaaa
gcgtttgtaaatcaggcaacgcaggtcaatgcctgggacagacttctcattgcgaatgga
gaaaaaattgttaccctaaatcaagaagttgaaagggttaaactagaacaggaacaatta
gagcacgagctggattatgtggttggtcaacaaagagaattacaggactgcctcgttcca
ttggaaaaagaattggcaacagtatccgcctcagatccggagagagaatacacttatcgt
cttgcagaaaatttggatacccaattgaagcagatgtccgaagatttaaaagaaataatt
gagcaccttaacgaagcgaatagatctcaagattcaagtgacccgattgtccagattggt
aaaatactgaatgcacatatgaacagtttgcaatggctcgatcaacgtacgtcagttttg
caaacaaagatacagcagattgatcaaatgcatcaaaactttagacaggaacatgagcga
agcttcaatttggcttataattaa
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