Neodiprion lecontei (redheaded pine sawfly): 107221493
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Entry
107221493 CDS
T09006
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107221493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107221493
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107221493
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107221493
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ssDNA_TraI_N
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
107221493
NCBI-ProteinID:
XP_015515986
UniProt:
A0A6J0BMR4
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Position
4:complement(20670015..20671780)
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AA seq
198 aa
AA seq
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MDERNEPIVCVPGQRLCLSDKVNVPGPGTYEQHGYIYSKLAGVVNLVKDEHKSTVEVHGI
REQSIVPAPGDIVTAEVMVVNQRFCKCVIKCIGDVVLTRPYRGILRKEDVRATEKDKTEM
YKSFKPGDIILARVLPLTEVHTYQLSTAENELGVVIAHSEEGVSMVPVSWTEMQCPETLN
KELRKVAKVVPEHIVNEK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaagaaatgagccaatagtgtgtgttccaggtcagaggctctgtttgtcggac
aaagtaaatgttccaggaccgggaacttacgagcagcacggatatatttattcaaaatta
gcaggagtggtgaacttggttaaagatgaacacaagagcacagttgaggtgcacggcata
agagaacaaagcattgtcccagctcccggagacattgtaacagccgaggtaatggtcgtt
aatcaaaggttttgcaaatgcgttataaaatgcattggggatgtggttttgaccagacct
tacagaggcattttaagaaaagaagacgtcagggctacggaaaaagataagactgaaatg
tacaaatcttttaaaccaggagatattattctggctagagttttacctctcaccgaagtc
catacttatcaactttccactgccgagaatgaattgggagtcgttatcgcccacagcgaa
gagggtgtatctatggtgcctgtaagttggacggaaatgcagtgcccagagaccctaaac
aaagaattgcgcaaagtagctaaagttgtaccggagcatatcgttaatgaaaaataa
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