Neodiprion lecontei (redheaded pine sawfly): 107221621
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Entry
107221621 CDS
T09006
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X2
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107221621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107221621
Membrane trafficking [BR:
nlo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107221621
Protein recycling
Other Rab GTPase associated proteins
107221621
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Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF3038
CAF1
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
107221621
NCBI-ProteinID:
XP_015516159
UniProt:
A0A6J0BNF3
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Position
2:2400044..2404258
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AA seq
617 aa
AA seq
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MYSIKTPTLRIDEADLKCKNGCGYFGNEEWQGYCSKCHREHLQKQRAQREHARIHESDSS
SKTTVHGFYKFEEKKRQQEKKTKLLKLSVFRKTATKTQGFSEIWQELVKDNPELDKVKSE
TRDLLVQIAKTPAEKDVRKCIHSFVNNILQMKDIKSVEELSELTQNFYQVFAKRMENSPN
YADVSPETKDRLLDYIERYTMTLLYRILFCPPSTTDEDKDLAIQNRIRQLNWVSGKNLEC
RIHETSSDVRELVYTSITDLLNMDSVKAPQEKLACVVHCCRNIFVLLQQSVGGPASADEF
LPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAESLN
MPQKDFDAYMSGARVPASTWESALTMCESIHLMCEHITLLDELKAKNLEIIAESDELKKK
MQQFPEKVEAEVDAAITRTPLIITPSQRIPTNLDCVDAESYQLPPPIIPQIYPQTLNDET
NETLTSHVGDYNGPSIEDCITPSPTFDFPAFDSDGGLHGSKGDDDTSLISLDTQCDLTAE
ESYLQDRDASDSLLDESQASGTNLPSPLKPVCSLREDYHGFSIQGSNIPTIPCNTGDLSH
NTSDLEADNYSGYFHNI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgatcaagacgccgactctccgcattgacgaggccgatttaaagtgcaaaaat
ggttgtggatattttggaaacgaagaatggcaaggctactgtagcaaatgtcacagagaa
catttgcaaaagcaacgggctcaaagagaacacgcccgcattcacgaaagtgattcaagc
tctaagactaccgtgcacggtttttacaaatttgaagaaaagaagcgacagcaagaaaag
aaaactaaactattaaagctgtcagtctttcgcaagaccgcaacgaaaactcaaggtttt
agcgagatatggcaggagctggttaaggataatcctgaacttgacaaagtgaaatcggag
acccgtgaccttctggtacagatcgctaagactccggctgagaaagatgtacgaaagtgt
attcattccttcgtaaacaacatcttacaaatgaaggatattaagagcgttgaggagcta
tccgaactaactcagaacttctatcaagtatttgccaagcgaatggaaaacagtcccaat
tatgcagatgtttctccagaaacaaaagatcgactactagactacatcgaaagatacact
atgaccttactctataggatacttttctgcccgccatcaactacagatgaggacaaggac
cttgctattcaaaacagaatacggcagttgaattgggtgagcggaaagaatctggagtgt
cgaatccacgaaactagttctgacgtgagagagcttgtttacacctcaataacagattta
ttaaatatggactctgtaaaagcaccgcaagagaagcttgcctgtgttgttcattgttgt
agaaatatatttgtactactgcaacaatctgttgggggtccagcttcagccgatgaattt
ttaccggcgcttatattcattgtgctgaaagctaatcctgcaagattgaaaagcaacata
aatttcatcacccgattctgtaatgctagcagattaatgactggtgaaggaggttactac
ttcacaaatttgtgttgcgcagtatccttcatagaaaatcttactgccgagtcattaaac
atgcctcagaaagatttcgatgcatatatgtcaggagcacgcgttccagcgagcacatgg
gaatctgctctcactatgtgcgagagtatacacctgatgtgcgaacacataacactgctg
gatgaattgaaagcgaaaaatttggaaatcatagcagaatccgatgagcttaagaaaaaa
atgcaacaattcccagaaaaagttgaggcggaagttgacgctgcgataactcgcactccc
cttattatcacgccgagtcaaaggataccgactaatcttgactgcgttgatgcagagagc
taccagctaccaccaccaattataccacaaatttaccctcaaaccctgaacgacgaaaca
aatgaaacactgacatctcacgttggtgattacaacggaccttcgatcgaggattgcata
acaccatctccaacttttgatttcccagcctttgactcagatggtggtttgcatggaagt
aaaggggatgacgataccagcctaattagcttggatacacaatgcgatcttacagcagaa
gaatcgtatctacaagacagagacgcctctgatagtttgctagacgaatcgcaagcatcg
ggcactaatttaccatcgcctctaaaaccagtttgttctctacgtgaagattaccatgga
ttctcaatccaaggttctaacattcccacgatcccgtgcaacactggtgatctttctcac
aacacttcggacttggaggcagataactattctggctactttcacaacatttga
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