Neodiprion lecontei (redheaded pine sawfly): 107221670
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Entry
107221670 CDS
T09006
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107221670
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107221670
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_29
RsgA_GTPase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
107221670
NCBI-ProteinID:
XP_015516226
UniProt:
A0A6J0BNF2
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Position
5:complement(30269619..30275529)
Genome browser
AA seq
1074 aa
AA seq
DB search
MSNERRKRKNSDRDAYPSKVARRSVSQANSSTDEDITETTGKIKRIFVRNFMCHDALEIY
LNKNVNFIVGRNGSGKSALLTALVVGLGAKANTTSRGSSVKDFVKKGRNSAVIEITLCNE
GPMAYKPEIYGDSILVRRTIGSAPGYKIKNSNGEVVSSKKDELERIIAEMSIQVDNPISI
LNQDVSRTFLVTAGPKEKYQLFMKATNLEKIGNNYKNAQIASEETRQRLIESIEHLSATK
KEIDKLEKTVQQLESIEGDRAQREALNSELHWALAIAEECKLSQIQTRLEEQQNNVENHQ
EEIKTKEIKEKRIKAKINEFKEKIQEIKNEAAGSSEAYATAKQELVSKKEAYSVKHKELV
LAQSKIKRMQQDINVLRTEIQRQEADSNQVENEKRRIREELSKLEEQLNEIDAMLLTKQT
DQIHRNNNYNHLIQEERALKQQIDHNDTIIKKIKRQLNDLKQESDNAVTIFGHNMPRLLR
RIKEEYDRGRFKQMPRGPLGAHIKVNDQTWAAAIENFLGFGTLRSFCADNMQDAKFLGQI
MKEIFGNEHNPQISVSKFFHKMHDVSQHCTRAPGFKNLLEMMEISDPIVANCLIDQREVE
CILLIPTSQKASEMLSDRRKVPRNCKRAITLQGDEFFPDPNYKSYGGRHGMRAKCLQVST
KEAIQAFEEELVLAQEQRATILDEHKQIQRNVHQAKTDLNQVNSNISRLRSNQSKIKTKI
NELRDKSEIDESNSIAVFTTEMNELIQIVEKDSKIVVQLKKETVGLQKEVESSETEVKRC
RDLMYCLDMKLEPIQKLIREQENELGLLSMNSQYGERRLLEAQQALQKLNADLEIQQRVT
GKAVAGAAKLSTRINTQRSAKTIKEKLEELRVTIETAERQFGALDQITADLEEKKKKYEE
VSEFASALKISNDEHLQRLEGRRRIYQQMKKEIGTKVRQSFQSILAVRQYKGSLTIDHQN
RLLSLEVNPAGSAKRITNDARSLSGGERSYSTVAFILALWECVKLPFYFLDEFDVFMDTV
NRRTIMDILLDHTRNHPAHQFAFLTPLDTSSILAEDFVTIHQLAAPERAVNGEN
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaaagaagaaaacggaaaaactcggatcgcgatgcgtatccgagtaaggtt
gccagacgttcagtttctcaagctaattcgtcgacagatgaagatatcacggagactact
ggaaaaataaagcggatatttgtgagaaattttatgtgccacgatgcattagaaatatac
cttaacaagaatgtaaatttcatcgttgggcgcaatggcagtggtaagagtgctcttcta
acagcattggttgtaggacttggcgccaaagcaaatacaacaagcagaggatcttctgtc
aaagattttgtcaagaaagggaggaacagtgcggtcatcgaaatcaccctttgcaatgaa
ggacccatggcttataaaccggagatatatggagacagtatcttggttagacgtacaatt
ggatctgctcccggatataagataaaaaactcaaacggcgaagtagtatcgtccaagaag
gatgagctggaacgtatcatagcagagatgagtattcaagtggataaccctatttcgatc
ttgaatcaagacgtctcgaggacatttcttgtcactgctggacccaaagaaaaatatcag
ttatttatgaaggccaccaatttggagaaaattggaaacaattataaaaatgcccaaata
gcaagtgaagagaccagacagcggttaattgaaagcatagagcatctaagtgccacgaaa
aaagaaatcgataaactcgaaaaaactgttcaacagttggagtctatagaaggagatcgt
gctcaacgtgaagctttaaacagtgaactacactgggcacttgcaatcgcagaagaatgt
aaacttagccagattcaaacgcggctagaagagcaacagaacaatgtggagaatcatcaa
gaagaaataaagacaaaagaaatcaaagagaaaaggataaaagcaaaaatcaacgaattc
aaagagaaaatccaggaaattaaaaatgaggctgcaggcagctcagaagcatatgcaaca
gcaaaacaagaactagtatctaagaaagaagcttattctgtaaagcacaaggaattggta
ttggcacagagtaagataaaacggatgcaacaggacattaacgttttacgtacggagata
cagcggcaggaggctgatagcaatcaagttgaaaatgagaaacgccgaattagggaagaa
ttgtccaaactggaagaacaattgaatgaaattgacgcaatgttgcttactaaacagaca
gatcaaatacatcgtaataataattacaatcacctgattcaggaagagcgtgcgttgaaa
caacagattgaccacaatgacacgataattaaaaaaatcaaacgacagttgaacgatttg
aagcaggaatctgataacgctgtgacaattttcggtcataatatgccacgccttttgcgc
cgtatcaaagaagaatatgacagaggaaggtttaaacaaatgccgcgtggtccgttggga
gctcatataaaagttaatgatcaaacatgggcagcagccatcgaaaattttcttggcttt
ggaactttacgttctttctgcgcagataacatgcaggatgccaagtttttgggtcagata
atgaaagaaatcttcgggaatgaacataatccacaaatttccgtcagtaaattttttcac
aagatgcatgatgtcagtcagcattgcacacgcgcgcctggattcaaaaatctattggaa
atgatggagatatcagatcctattgttgctaactgtttaatagatcaacgagaagttgag
tgtattttattgatacccaccagccaaaaagccagtgaaatgttatccgacagacgtaaa
gtacctcgaaattgtaagagggccataacgctgcagggtgatgagttctttcctgatcca
aattacaaaagctatggtggacgacatggaatgagagcaaaatgtttacaagtgtcgaca
aaagaagctattcaagccttcgaagaagaactagtccttgctcaagaacagagagcgaca
atacttgacgagcacaaacagatccagaggaatgtacaccaagctaaaacggatctgaat
caagttaacagcaacatttccagacttcgctcaaaccaatctaaaataaaaactaagatc
aacgagcttcgcgacaagtccgaaattgacgaatctaattctatcgctgtatttacgacg
gaaatgaatgagttgatacaaatagtagaaaaggattcgaaaatagtcgtgcaactgaag
aaggaaacggttggattacaaaaagaagttgaatcatctgagacggaagtaaagaggtgt
agggatctcatgtattgccttgatatgaaacttgaaccaattcagaaattgataagggaa
caggagaacgagttaggattgttgagtatgaattcacagtatggagagcgaaggttgtta
gaagctcagcaagctctacaaaaacttaacgctgatcttgaaatacagcagcgtgtcact
ggcaaagcagtagcaggagcagccaaactttctactagaattaacacacaaagatctgca
aagacaatcaaagagaagctagaagaattaagggtaactattgaaactgcagagaggcag
tttggcgctctagaccagattactgctgacttggaagaaaaaaagaaaaagtatgaagag
gtatcagaatttgcttctgccttgaaaatcagtaacgatgaacacttgcaacgattagag
ggacgaagacgcatatatcagcaaatgaaaaaagagattggcactaaagtacgccagtcg
ttccaaagcatcctagctgtaagacaatataagggtagtcttacaatagaccatcaaaac
agactgttgtcacttgaagtcaacccggcaggcagcgctaagaggataaccaatgatgct
agatcactatcgggaggtgaacgttcatattcgactgtagcattcatcttggccttgtgg
gagtgcgttaaactgccattttactttcttgatgagttcgatgtgttcatggacacagtc
aatcgacggactattatggacattctgctagatcatacgagaaaccatccagcacaccag
tttgcgtttctaactccgctagacacttcaagtatattagctgaggattttgtaaccatt
catcagttagcagcccccgaaagggctgtaaatggtgaaaattga
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