Neodiprion lecontei (redheaded pine sawfly): 107221707
Help
Entry
107221707 CDS
T09006
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nlo03009
]
107221707
Enzymes [BR:
nlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
107221707
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
Other ribosome biogenesis factors
107221707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
Fibrillarin
FtsJ
Methyltransf_25
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
107221707
NCBI-ProteinID:
XP_015516291
UniProt:
A0A6J0BNL5
LinkDB
All DBs
Position
4:complement(3647473..3654179)
Genome browser
AA seq
653 aa
AA seq
DB search
MSGVFEHSIKVPRLYKTVAKIVQTVREDGASLKQLVYLKQHPNIKALYALALTSLQHASQ
LDQLIRRTKILVNEPRLDPWLARVLITELLWGKKHLSSECKPVLTVLAYEKLLKDELKNT
ESFVNPENKLKVEKPRYVRVNTLSMSVEEAIESFKEEGWRQLHRSKDYVEFIESVSKLSG
AAFIQDIHVPELLIFPAKTQFYNHAGYISGSIILQDKASCLPAYLLDARPGSTVLDMCAA
PGMKTTHLAAMLNNKGKIYAVEIDKRRYQTLCEIVASTNSHCVETINADVMTLDARQCHD
VEYILVDPSCSGSGMLDRLDIDSNTEKCAPGRLKNLQSFQVIILRHALLNFPKAKRIVYS
TCSLYPEENEQVIDDVISQVGDAYKLVSAKTLMNENWLNYSSTDYNCKDNCLYARPETDL
SNGFFVAVFERNFDAPLPDIKRKKNKLGADTIKGQNGVESSEIQSNKKDKKKKQKHSNEH
ASSNENGGATVTLGSEEITADYGTVIQGGTDVVRKKKKKRAKDFDVTKNAGAEENSQNDC
DKVNKTEEKISKRKHKHSVSVETIVENCDELSTKKKKCKKSRTEDKEIDSDALRGDEESV
KKKVKKSKKQRDRVETEDDAENESKHKVSNDQVDKTAESADSASRKKRKKRKV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgtattcgaacactcgataaaagtaccgaggctttacaaaaccgttgctaaa
attgtacaaactgttagggaggacggtgccagcctcaaacagttagtttatctcaaacag
catcccaatattaaggcgttgtatgctctcgcgctcacgagtctccagcacgcttctcaa
ctggatcagcttattcgtcgaacaaagatactggtaaacgagccccgacttgacccatgg
ctagccagagttttgatcactgaattattgtggggaaaaaagcacttgagctcagaatgc
aagccagtgttaacggttcttgcctatgagaaattattgaaggatgagctaaagaataca
gagtcatttgtaaaccctgagaataagctaaaagttgaaaagccaagatatgtcagagtc
aatacattgtcgatgtccgtggaggaggcgatcgaatctttcaaagaagaaggatggcgt
caattgcacaggagcaaagattatgtcgagtttatcgagtctgtgtcaaagctgagcggt
gcggcattcatccaagacatacacgtcccggaattgttgatatttccggcaaaaacgcaa
ttctacaaccacgccggctacattagcgggtcaataatcttacaggacaaggcaagttgc
ttgccagcctatctactcgatgctcggccaggatctactgtacttgacatgtgcgctgcg
ccaggaatgaagacaacgcatttagctgcgatgctcaataataaaggaaagatctatgcg
gtggaaatcgacaaacgaaggtatcagacgctctgtgaaatagtcgcatcgacaaactct
cattgcgtagaaaccatcaatgccgatgtaatgacgctggacgcccgacaatgccacgat
gttgaatatattttggtagatccaagctgttctggttcaggaatgctcgacaggctggac
atcgactccaataccgaaaaatgcgcacccggaagattaaagaatctacagtcgtttcag
gtgataatacttcgtcatgctctcctaaattttcccaaggcaaagcggattgtttattca
acttgttctctctatcccgaagagaacgaacaggtcatcgacgacgttatatcccaggtt
ggagatgcgtacaaactagtatcagcgaaaacacttatgaatgagaactggctaaattac
agttcgacagattataattgtaaggataattgcttgtatgctagacccgagactgacttg
agtaacggtttcttcgtggctgtttttgagaggaattttgacgctccgttaccagatatt
aaacgcaaaaagaataaacttggagctgatacaatcaaaggacaaaacggtgtggagtca
agtgaaattcaatctaacaagaaagataagaaaaagaagcagaagcactccaatgaacat
gcgtcgagtaatgaaaacggtggcgcaactgttacgctgggaagtgaggaaatcactgcc
gattacggaacagttattcaaggaggaacagacgtggtacgaaagaagaaaaaaaagcga
gcaaaagattttgacgtaacaaagaacgcaggcgcagaagaaaattctcagaatgattgc
gacaaagttaacaaaactgaagaaaagatatcaaaacgcaaacacaaacacagcgttagc
gtggaaacaattgtagaaaattgcgacgagttgtcgacgaagaaaaagaaatgtaagaaa
tcgcgaacggaagacaaagaaattgactcggatgcacttcgaggagatgaagaaagcgtt
aaaaagaaggtaaaaaaatcaaagaaacaacgcgatcgtgtagaaactgaagacgatgcg
gaaaatgaatcgaaacacaaggtatccaacgatcaagttgacaaaactgccgagagcgca
gactcagcgtctcgcaaaaaacgtaaaaagaggaaagtttga
DBGET
integrated database retrieval system
