Neodiprion lecontei (redheaded pine sawfly): 107221875
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Entry
107221875 CDS
T09006
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107221875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107221875
03036 Chromosome and associated proteins [BR:
nlo03036
]
107221875
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107221875
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107221875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Tautomerase-like
Motif
Other DBs
NCBI-GeneID:
107221875
NCBI-ProteinID:
XP_015516519
UniProt:
A0A6J0BPJ7
LinkDB
All DBs
Position
4:23592354..23606751
Genome browser
AA seq
1876 aa
AA seq
DB search
MFGQSANTSFGGFGAGTQSSPFSQSPFGKPITTTSFGGTAAPVFGSTNNSLFGAKPAGAT
TGGLFGNTAATPAFGQPATSQSSFGGFSNPNTNTGLFGNQQNANTSLFGTSNPTPAFGQG
TKPAGFGFGSSAGTGLFGQTQQPTQQTAPSLFAPSNTAANTSLFGATTGFAGNNTAGGMS
GTVVKFNPLTGTDTMIKNGVTQTISTRHYCITCMKEYEGKSLEELRLEDYTAGRKGQVQG
TQTTGLFGSAAQPSLFSNTGVNTSTANTGFGATTTGFGGTSQPTANTGLFGKPIAGFGAA
ATTSSAFPFNSTTTTSNPFGANAQAKPFGAAAPTPLFGNANTSQTAATGFGTNNTSAFGS
FGAVQPNQSIGLFNQNKPAFNMPASTASTGFGGFGQNTATNTSGGLFGVKPSGTTGFGTA
PSFGATPAPAFGTGTGFGSTQNTGTSLFNSSFKPAGQPGFSFGATPSTSTGLGVSSGLNL
GTGSLLFGQPKPGGLFSTPGTNTNFNTTGNFGLGSNFGANNNTMGSGLGTMGGGMGTNPA
QQNSGANQVHQQILALVSAPFGDSPLLKNLLPASGKTEDLLKPTNATTRALNSPQYKITT
NNSSPKIKARAVTNAQLSKKSLFEGLEEEDPALQEAFQPRANAKRLVLRPKPISTGDAQS
LDRVATSPTVTESVRVKRDVLENANKENHQQDDIRRPADDRRSSTSWLKSSLQRPAKLPE
DEFEGQPTLFRGSDNLEEGLDNTVAELRPQNKPQSLPQSPKLLAAGDSAVNSPSNIDRST
LNSSNSSDTSDEQDETAAISQTEQEPNAACITLRRAGYYTIPPLDKLEEYVCGDTCVVPN
FTVGRKGYGNVYFPDLIDIYGLNLDEIVHFRNKEVIIYPDDDQKPPMGQGLNRRAQVTLD
RVWPHDKTLHEPITDPERLSAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYG
LSDSDEEDEDIPANADLKKLKAIMKPRVNAAGPVNKQLVPPVTDAKLQKKHSFLKRTSQE
VQDSTLSFQSDTLNETDMALNEFYTNDQENDRSLALSPSAIFARVRGTDSHKLQLMKASF
FDTDDEDIDDGTYKTQLNFLPKSSTKIISSTETMEAMEDDQMVPSGHVPTLRSNLSMQQD
NSFLAKESRIMKDKKLAEVTDISHAKTSRLIQAFPPPIVKPATVVLQFSSEVLPLKESIV
GKLNARCVADIGIQMGRSFRVGWGPDLTLVSLSTQKQAAIVPLHGKFSDLGSYVSGRLSN
DTTSSIVQRLQIVGGGGDDVEHIETFKESIVGHLRIQLNHCILGHEGDCPVVGAGAGPAT
LHAHCNLAQELADSSNSDPLASYTSHVWNLSVALWGNLPDIQPESDEMKHQNVMVRREAL
SEWLENVIMETVLKETPEDDPSDKTILSLLSAHKLEDACKIAREAGDHCSALLMAQLGGP
PSVRELIKQQLAMWQHTEVDTELSPDKLKLFMLVAGEPLICIKNGCVNVCEDLEWKQALG
FHLWYVCPPTASVTDAVSLYESAFDASETESYASAPSPEYQEEDYEAEISSGKKVRDLCF
HLLKLYCSGNHPLEKLLNPLTHTADPLDYRLSWLIQQVLVALGYSHLSSHVAAITHMNFA
AQLETYGLWHWAIFVVLHLEDTGRRRSAVVDLLSRHVELDERSDYMKREEFLREELGIPS
MWINKAKAIKAGAMKRYGEAAWYLIHGEQWNAAHELIIEHLAADAIINENLDYLNSLLSP
LVPTECSSTINGWAHRGQLLWDYMLINEEIEALLAGNTDSTSIGYKLELLQPQLSLLCAK
INQFPCPTAKHRLCQAEIAKRTAHLARNLVLLQSNGKNSTSRILAHLVTQLPLPEDYAQQ
ELRHIVNLYVNEIGAR
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaatctgctaatacttcatttggagggtttggtgcagggacccagagtagc
ccatttagtcaatctccatttggaaaacccatcacaacaacgagttttggtggtacagca
gcaccagtgttcggcagtaccaacaattctctgttcggcgcaaagcctgcgggagcgacg
acaggcggactatttggcaatacggcagcaacacctgcttttggacaaccagccaccagt
cagtcatcatttggaggattcagtaacccaaatacgaacaccggtctctttggtaatcag
caaaatgcaaacaccagtctatttggaacaagcaatcctacccctgcttttggtcaagga
actaaaccagcagggtttggctttgggagttcagctggaacaggattatttggacaaaca
cagcaacctactcaacaaactgcaccgtccctttttgcaccatccaatacagctgcaaat
accagcttatttggagctacaactggatttgctggaaataatactgcaggtgggatgagt
ggtacagtggtgaaatttaaccctcttactggtactgatacaatgataaaaaatggcgtt
acccaaaccatatcaactcgacactattgcattacttgcatgaaggaatacgaaggaaaa
tctctggaggaattgcgtttagaagactacacagcaggtcgtaagggacaagttcaaggg
acacaaaccactggactgtttgggtcagcagcccaaccttcactattttctaacacaggc
gttaacacaagcacagcaaatacaggttttggggcaactacaactggttttggaggaaca
agtcagcccacagcaaacactggtttatttggaaaaccaatagccggttttggagctgca
gccaccacaagtagtgcttttcctttcaactcgacgacaacaacatctaatccatttggt
gcaaatgcgcaagctaaaccctttggggctgcagctcctacaccactttttggcaatgcc
aacacaagtcagacagctgctactggatttggtactaacaatacatctgcattcggttct
ttcggcgctgtacaacctaatcagagtattggactcttcaatcaaaacaagcctgccttc
aatatgcctgcatccacagctagtactgggtttggaggatttggacaaaatactgcaaca
aatactagtgggggtttatttggtgtgaaaccatctggtacaacaggctttggcactgca
ccttcatttggtgctacgcctgctccagctttcggaactggtacaggttttggttcaaca
caaaatacgggaacatcattatttaactcatccttcaaacccgcaggacaacctggattc
tcatttggtgctacaccttcgacatctactggacttggagtaagttctggtctgaatctt
ggtactgggtctttactgtttggacaaccaaaacctggcggtctctttagtactccgggt
accaatacaaacttcaatactactggcaactttggactagggagtaattttggagcgaac
aacaacactatggggtctggattgggaacgatggggggaggaatgggcaccaatccggca
caacaaaattctggagcgaatcaagtccatcagcaaattttagcattggtctcagcacca
tttggcgattcaccgttacttaaaaatttactaccggcctcgggtaaaacggaggacctt
ttgaaaccgacaaatgcaaccactcgagctttgaacagtccacagtataagataactact
aacaatagttcccctaaaataaaagctagagccgtgacgaacgctcaactctctaagaaa
tcactattcgaaggcttagaagaagaagatccagcattacaagaagcttttcaaccacga
gctaatgcaaaacggctcgttttgcgtccaaaaccaataagtaccggagatgcacagtcg
ctagatcgagttgcaacttcgcctaccgttacagaatcagtaagggttaaaagagatgtg
ttagaaaatgcgaataaagaaaatcatcagcaagatgatattcggcgtcctgctgatgac
agaagatcctctacatcatggttgaaatcaagtttacaaaggccggcaaaattaccagaa
gatgaatttgaaggacaaccaacgctattccgaggatcagataacctagaagaaggtctt
gacaacaccgttgcagagttgaggcctcaaaacaaacctcaaagcttacctcaatcacca
aagctgcttgcagctggtgactcagccgtgaactctccatcaaacattgacaggagcaca
ttgaactcttcgaacagctctgacactagtgatgaacaagatgaaactgcggccatttcc
caaacagagcaggaaccaaatgcagcttgcattacgctgcgacgtgctggttattacaca
atcccaccacttgacaagcttgaagaatatgtttgcggagatacttgtgtcgtgcccaat
tttacagtgggtcgtaaaggatacggcaatgtgtatttcccagacctgattgacatttat
ggcttaaatctggatgaaattgttcactttcggaacaaggaggttattatttacccggat
gatgatcaaaagccacccatgggccaagggttgaatcgtagagcgcaagtaactctcgat
cgcgtctggccacatgataagactcttcacgaacctataactgaccccgaacgtttatcg
gctatgaattatgagggaaagcttcgcagagtttcggcaaaacacgataccaggtttcta
gaatatcgtccagaaaccgggtcttgggtttttaaggtcgaccacttctcgaaatatgga
ctcagtgattccgatgaagaagatgaagatattccagcaaatgctgatcttaagaagctc
aaagctatcatgaaaccaagagtaaatgcagcaggaccggtcaataagcaactagttcct
ccagtaactgatgccaaactacaaaaaaagcacagcttccttaaacgcacgagtcaggag
gttcaagattcgaccctaagttttcaatcagatactctaaatgagactgatatggcactg
aatgaattttatacaaatgatcaggagaacgatcgatcattagcactcagtccatctgcc
atttttgcacgcgtcagaggaacggatagccacaaacttcaattgatgaaggccagtttt
tttgatacagatgacgaagatattgatgatggcacctataagactcaattaaacttcctt
ccaaaaagttcaacaaaaataatttcaagcacagaaaccatggaggcgatggaagatgac
caaatggttccttccggccacgtacctacattaagatctaatttaagtatgcagcaagac
aattcatttctggctaaagagtctagaattatgaaagacaaaaaacttgcagaggtgact
gacatttcacatgcgaaaacttcaagactaatccaagcttttcctcctcccattgtgaag
cctgccacagttgtccttcaattctcttcagaagttttacctctcaaagaatctattgtt
ggaaaattaaatgctcgttgtgtagctgatattggtatccaaatgggacgttcttttcgg
gtaggctggggacccgatttgacactggtctctctaagtacacaaaaacaggctgcaata
gttccactacatggtaaatttagtgatctcggatcctacgtgtcaggtcgtttatccaat
gatacaacatcaagcattgtacaaagattgcagattgtaggaggtggcggcgatgatgtg
gagcacattgaaacattcaaggaaagtatagttggacatcttcgtatacaactgaaccat
tgtattcttggtcatgagggagattgcccagtagtaggtgctggtgcaggaccagcaacg
ttacatgctcattgcaatcttgctcaagaattggcggattcgtcaaattcagatcctctg
gcgtcttacacaagtcatgtgtggaacctgagtgtggctctttggggaaatttgccagat
atacaaccagaaagtgatgaaatgaaacaccagaatgtgatggtgaggcgagaagcactc
agtgaatggctggagaatgtgataatggaaacagtactaaaagaaacaccagaagacgat
ccatctgataaaacaatcctgtcattgctttcagcacacaaactggaggacgcctgtaaa
attgcacgagaagcgggtgatcattgttcggcacttcttatggcccaacttggagggcca
ccgagtgtaagagaactgatcaagcaacaactagctatgtggcaacacactgaagtcgat
acggagctttcacctgataaactgaagctattcatgcttgtagctggagaacctcttatt
tgtataaaaaatggatgtgtcaatgtttgtgaagatctagaatggaagcaagcattaggt
tttcatttgtggtacgtctgtcctcctaccgcatctgtcaccgacgcagtgagtctttat
gaatctgcttttgatgcatctgaaactgagtcttatgcttcggcgccaagcccagagtac
caagaagaggattacgaggcggaaataagtagtggaaaaaaagtgcgagacctgtgcttc
cacttactaaaattgtactgctccggtaaccatccgctggaaaagttactgaatccgtta
actcacacggcagatccattagattacagactaagctggttgatacaacaagtgcttgtc
gcgcttggttattctcatttatcttcgcacgttgctgcaataacacacatgaactttgct
gcccaattggaaacgtatgggctttggcattgggctatatttgttgtgctacacctggag
gatacgggcagacggcgatcagcagtagttgatcttctatcacgtcatgttgaactggat
gagaggtcagattacatgaaacgagaagaattcttgagagaggagcttggcataccttca
atgtggattaacaaagccaaagccataaaagctggggcaatgaaacggtatggcgaagct
gcttggtatcttattcatggtgaacaatggaatgctgctcatgaactcataatagaacac
ctagctgctgatgcaataataaatgaaaacctggattatttgaattcgttgttaagcccg
ttagtaccaactgaatgcagcagtacaataaatggatgggcacaccgtggtcaactactt
tgggattatatgttaatcaatgaagaaattgaagcattgctagctggaaacacagacagt
accagcattggatacaaacttgaattattacagccacaattgagtcttttgtgtgcaaaa
ataaatcaatttccttgcccaacagccaagcataggttgtgccaagcagagattgcgaaa
agaactgcacatttggccagaaacttggtgttattacaatcaaacgggaaaaattcaact
tccaggattcttgcacatttggttacgcagttacccctaccggaagactatgctcagcaa
gagctacgtcacattgtaaatttgtatgttaatgagataggagcccgttag
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integrated database retrieval system
