Neodiprion lecontei (redheaded pine sawfly): 107222018
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Entry
107222018 CDS
T09006
Name
(RefSeq) very low-density lipoprotein receptor isoform X3
KO
K20053
very low-density lipoprotein receptor
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107222018
Membrane trafficking [BR:
nlo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107222018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Vgb_lyase
EGF_3
Motif
Other DBs
NCBI-GeneID:
107222018
NCBI-ProteinID:
XP_015516699
UniProt:
A0A6J0BQ41
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Position
1:30704825..30734604
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AA seq
899 aa
AA seq
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MGWSYIRRLTAAASSLLFVLAITASVNLVHGFSTESAGACPLRQYRCDNAKCIPVTWVCD
GDNDCEDNSDERTEECKSTKACTDAEFRCTNGRCILKNWQCDGENDCPDGSDENPSICRS
KNCTAEQFTCRGSIGQCVPLTWMCDDHPDCMDRSDETDCNNTCRADEFTCDNKHCIQRHW
VCDHDDDCGDGSDEKDCQPSTCQPDTQFTCAKGYCITSRWRCDGDSDCPDGSDEMGCTDR
PPKDKMNHCGVHEFSCDDHITCIRQSWVCDGGRDCPDGADESPSNCGSVTCRPDQFQCSD
RSCISGRFFCDGIKNCPDGADEKNCTAADVVCDPLKQFDCGHGSCIPLSSLCDGKPDCLG
WEDEPLDLCKKNECLVNNGGCSQICVDLPIGFRCECRNGYRLINNQTCDDVDECLEPGSC
SQFCKNEKGTFKCSCDAGYLRDPRDLTRCKAAEGHASLLFARRHDIRKVALDRPEMTAIV
NNTKMATALDFVFRTGMIFWSDVSDKKIYKAPIDEGNERTVVIDRDLTTSDGLAVDWIYN
HIYWTDAEKNTIELANFEGNMRKTLIKDRVQEPRAIAVNPLEGWMFWTDWGDDARIERAG
MDGSHRSIIVGTEVRWPNGLTLDLVGKKLYWVDAKLNKIASCNYDGSGRRTVLYSPDILR
HPFSITTFEDYIFWTDWDKEAIFKANKFTGKEVEAITSVRSVQHPMAVHVYHPYRQPDGK
NQCQAVNGHCSHLCLPAPKISAKSPLLSCACPDGLRLLPDGLMCVENVTTTVAPTTQAVT
VPFKRFEPPKVTGSSRPTNGTDGNGGAGFSEENTDRGIVAGIVIGVVTVGLAVPALVAFL
CYRHYLHRNVTSMNFDNPVYRKTTEDQFSLEKNRFPLPATTVGEEAQEPLTSPGTNDYV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggggtggagctatattcgcaggctcacggcagccgcctcgtccctgctcttcgtcctg
gctataacagcctcggtcaacctcgtccacgggttttccaccgaaagtgcgggcgcatgt
ccgctgcgacaataccgctgcgacaacgcgaaatgcataccagttacgtgggtctgcgat
ggagataacgattgcgaggacaattccgacgaacgtacggaggaatgcaaatctaccaag
gcttgcaccgacgcggagttcagatgtaccaatggccgatgtattctcaaaaactggcaa
tgcgatggcgagaacgactgtcccgatggatccgacgaaaaccccagcatctgccgaagc
aagaattgcactgctgaacaattcacgtgtcgcggaagcatcggacagtgtgtaccattg
acctggatgtgcgatgatcacccggattgtatggatcgttcggacgagactgactgcaat
aatacctgccgtgccgatgaattcacctgtgacaacaagcactgtattcagcggcactgg
gtctgtgatcatgacgatgactgtggagacggaagtgatgaaaaagactgccaaccatca
acgtgtcaacctgatacacagttcacctgcgcaaagggttactgcatcacatcacggtgg
cgatgcgatggagattcagattgtcctgatggttctgacgaaatgggatgcacagataga
ccacctaaagacaaaatgaaccattgtggagttcacgaattctcatgtgatgaccacatc
acttgtatacgtcagagttgggtttgcgatggcggtagagattgtcccgatggcgctgat
gaatctcccagtaattgtggatcagtcacttgcagaccagaccagtttcagtgctcagat
cgcagctgcatttcagggcgtttcttctgcgatggaataaaaaactgtccggatggtgct
gatgaaaaaaactgtacagcggcagacgttgtttgtgacccgttgaaacagttcgattgt
ggtcatggctcgtgtataccactgagcagtttgtgcgacggaaaacctgattgtctggga
tgggaagatgagccgctagatctatgtaaaaaaaatgaatgccttgttaacaacggtggc
tgttcacagatatgtgttgaccttccaattggtttccgctgcgaatgtagaaatggctac
agattaataaacaatcaaacttgtgatgatgtcgacgaatgtctggagcccggaagttgt
tcgcagttctgtaaaaatgaaaagggtacctttaaatgcagttgtgatgctggttatctc
agagatccacgagacttgactcgctgcaaagcagctgaaggccatgcaagtttattattt
gctagacgtcacgacattcgaaaagtagcactcgaccgtccagagatgacagcaattgta
aacaacaccaaaatggccacagctctggatttcgtctttcgaactggtatgatattctgg
agcgatgtcagtgataagaaaatatataaagctcctattgacgagggtaatgaacgaact
gttgtcattgatcgtgatctaaccacatcagatggtcttgctgtagattggatttataat
cacatatactggacggatgctgaaaaaaatacaattgaactggcaaattttgaaggtaac
atgagaaaaactctgataaaagatcgcgtacaagaaccaagagcaattgctgtcaatcca
ctggagggttggatgttctggacagactggggtgacgatgctagaattgaaagagctggg
atggatggctcacaccgttcgatcatcgtaggaaccgaagtgagatggccaaacggctta
acgttggatttagttggaaagaaattatattgggtagatgcaaaattgaacaaaattgct
tcttgcaactacgacggatctgggagacggactgtattatactcgcctgatattctcagg
catccgttcagcattacaacgtttgaagattacattttctggacagattgggataaagaa
gctatttttaaagcaaacaaattcaccggcaaagaagttgaggcgataacttctgtgagg
tctgttcaacacccaatggctgtacacgtgtatcatccgtataggcaacctgatggaaaa
aatcagtgtcaggcagtaaatgggcactgtagtcacctttgcttaccagcaccaaagatc
agtgcaaaatcccctcttctcagttgtgcttgtccagacgggctcaggcttttacccgat
ggtctcatgtgtgtcgagaatgtaacgacaacagtcgcaccaaccacccaagctgtcacg
gtgccattcaagaggtttgaacctcccaaggtcacaggttcaagtagaccaacaaatggc
acagatggcaacggaggagctggcttttccgaagaaaacacagatcgtggaatagtggct
ggaattgtaataggagtggtaacagttggccttgctgtaccggctcttgtagcctttttg
tgctacaggcattacctacatcgcaatgtcacaagcatgaactttgacaatcccgtgtac
agaaaaacaactgaagatcaatttagtttggaaaaaaaccgtttcccacttcctgctaca
acagttggcgaagaggctcaggaaccattaacaagtcccggaaccaatgattatgtttaa
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