Neodiprion lecontei (redheaded pine sawfly): 107222045
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Entry
107222045 CDS
T09006
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlo03000
]
107222045
Transcription factors [BR:
nlo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107222045
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DDHD
CSRNP_N
C2orf69
Motif
Other DBs
NCBI-GeneID:
107222045
NCBI-ProteinID:
XP_046587930
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All DBs
Position
2:13588649..13903404
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AA seq
497 aa
AA seq
DB search
MLTMETDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGALGSIVHSPALSGSPPTAGGLG
GLGLQHHHQASSHHYAAMQSQQQQQQQQQQQQQQQQQQQSMHALASQQSAAQQQQQQQAA
QHHAHQQQAPQHQPPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI
SKRLGAEWKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKDKFPMGGGV
PGVGGMLGVDQRNVAAGAGQQTQLPRDVYQMPNGYMPNGYMMHDPAVTYQQHPYGGHMGA
AAGYPRYDMGHHMGGGSPSPINSYMNGYGGYGGTTVPGGSPSPYHQPQPGSQMSSHSPSG
SSIKSEPTSPASGGIHTPTPTGPSSTGAPVKREYMGQQQAPQPQGDLRQMISMYLPQSAE
QGVPQHGGSVYSPGPSPDPLAQHHSGVPPLTHMSENERKMLNPENGCYAESVRAWYHYPE
EAWRPPPRRYSSMPPSP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatggagacggacctcaagggcggcagcctccacgggcaaatgcctccgcac
ccacaccagggcgtctcgcccatgggtcaccacaccggggtgtcgccctacggagccctc
ggctctatcgtccacagtccagcgctgtcgggcagccctccaaccgccggaggcctcggg
ggcctcggtctacagcatcatcatcaggcctcgtcgcaccactacgcggcgatgcagtcc
cagcaacaacagcagcagcagcaacagcagcagcaacaacagcagcagcaacagcagagc
atgcacgcgctggcgagtcagcaatcggcggctcagcaacagcagcagcagcaggcggct
cagcatcacgcgcatcagcaacaagcgccgcagcaccagccgcccaataacaacaataat
acaagcaaaaacaacaacatcgatcgagtcaagagaccgatgaacgcgttcatggtctgg
tcgaggggtcagcggagaaaaatggcccaggaaaatccgaagatgcacaattcggagata
tcgaagcggctcggggccgagtggaagctgcttagcgagaccgaaaagcgaccgttcatc
gacgaggcgaaacggctgagggccgtccacatgaaggaacatccggactacaagtaccga
ccccgcaggaagacaaagacccttattaagaaggacaagttcccgatgggcggtggcgtc
ccaggggtaggcggcatgctaggcgtcgatcagaggaacgtggccgccggtgccgggcag
cagacccagttaccacgagatgtttatcaaatgcccaatggatacatgccgaacggatac
atgatgcatgatccggcggtcacgtaccagcagcatccgtacggtggacacatgggcgcc
gctgccggctacccgaggtacgacatgggacatcacatggggggcggaagtcccagtccc
ataaacagctacatgaacggttacggaggatacggcgggaccaccgttcccgggggctcg
ccttcgccctatcaccagccccaacccggatcgcaaatgtcgagccacagtccgtcgggc
agtagtatcaaatccgagccgacaagcccggcgagcggcggcatccacacgccgacgccg
accggaccctcgtccaccggggccccggtaaagcgggagtacatgggccagcagcaggcc
cctcagccccagggtgacctacggcagatgatatcgatgtatctgccacagagcgcggaa
cagggtgttcctcagcacggtggcagcgtgtattcacccgggccatcgcccgatcccctg
gcccagcaccattcgggcgtaccgccgctaactcacatgtctgaaaacgagcgaaaaatg
ctgaatccggagaatggatgttatgccgagtctgttcgtgcatggtaccattacccggag
gaggcttggagaccaccgccaagacggtattcctcgatgccaccgtcgccgtga
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