Neodiprion lecontei (redheaded pine sawfly): 107222303
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Entry
107222303 CDS
T09006
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
nlo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107222303
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107222303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107222303
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107222303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
DUF7129
Motif
Other DBs
NCBI-GeneID:
107222303
NCBI-ProteinID:
XP_015517086
UniProt:
A0A6J0BQQ9
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All DBs
Position
2:complement(2215797..2224166)
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AA seq
1546 aa
AA seq
DB search
MAKGGNSLNNKRSRNAKPYDANNSFVKKVATKVTDLIPQRSWISKWFNSSQDNGEMLNDE
ENLEGSENEQESQQPPPSKRPRIRMDVTHPPGTFNIQPRSRIPDNEEVDPRKEDYIIHNE
TTTDFLEPSVAGTSGVRRLVASTPAIQSEIGSMSNQRNRTKFISLTSPQNNGTANGTDDN
SESSESTSGCSSLIPQVNRQEAPSSLGYNRSSTSRKRYNEDKLNYTNHLQSPRSLFLDSN
PRDSLSSRKPSFNVSIMNNSLERGQSSSPFYNGNTTFGGANMAGFQRRGRTLFNSTNELQ
LKVPNRTNIQVKSPNVTGTDSSAMSQTAKRILEALEHFSSPILDAKKIPMNANNSSSLIG
GKKRQREEGCAPLARVGLRHLTRELTVPTVPDLLKLRRRQRLQDTTVAARRIVSARSAPP
PSPQEYRLRSDDEEKSKYSGKVKSKGKTDLDQDYVTDAVNLPSVTLPISTLPTFDIKLPV
ITSNMAKGVKDELFKFSSPIKVTDTTRNLKSINNFTFSKPINASVKESAEGGHSLSRTLS
SESDTLPARFSSSNNFMWSKTSTAPKLKEKPKEDVVVDGIKTSSKLKTGSVMDVLGKKSD
LLTDANKPVVGMWECNQCLLKNNQHEPQCIGCKASKLLCKGDKTTEHTPESSTLTVTQSK
PVTTDCFGSQFKMSGNHWECPNCATSNKQSDVKCTLCAMSKSESIKAPTIGSTSSIVPES
VKSDLMEKFKPPEGSWECPGCMLRNHSSVETCPCCNASKPGSLKISPKRVPATSELLTTI
SNPGGNQLANNTDSVEKTKSTNEDLWECLKCKQKNSRATLICPCFSTSKSDSTSTPALGF
GDKFKKPEGAWTCDDCMVQNKADVIECVACSAVRPGSKKVAKSTSATGSGSNVQFSFGVP
ENAGGFKFGIDKSDEKVDAIKPVPSSTGFTFGAKTDSPKAGGFTFGVPQNSSGFTFGVVD
NEKNKFEQKSDTKETDAVQNVSKKRSLNVEEPKNQAPFSFGIPKTEEAKSSAEKQFAFGA
QPVANTTAKQSFSFGAVKTEAPVNKKDTLPEVYITVSNTESQKLNFSAPTSDAPAAILAN
DQSSSITTKLSINTDITKSAENPTFGTINVPVSLSSGSTVTTTAASVPTPGLFTFGSATT
IPNQPTTVPSQVVQSFGQIPVSAPTSVPTPSMFVFGSTKQASTIAATTHPDKSEIVSFGS
TNSPAFNAITSAPRFEGNENKQAPSFGMTDNKPAPLFGAGETKAPVFGAAQDNNKMIPAF
GSIKKTASTSVFNSTTPAFGVSSSTPAFGTAAPAFGTTSTPAFGTNPTPSIFGTSKPVET
APSSTSGLFAFGGSSTQPSASQASSGFNFSQNPTPASVQPMAQKSLFAFGNTSTNTQQSD
GTGFGAAANFNPPAASDTTAGTFVFNTPKPDAAPPFSLIAPTSTSIFGTPQAAPNFGQSQ
STSAFGSVALTPNASFNFGGSATPAPSGFNFGGAATAAAPTGGFPFNAPNSNQGVAFNPN
TPPTFNFTGGSAPTAFNAVPQTIPQATTQATPQRKFKKAVRRTQPR
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggaggtaacagtttgaacaacaaacgttcgaggaacgccaagccctacgac
gcaaacaactctttcgtgaaaaaagtcgctacgaaagtcacagatctgataccgcagaga
tcgtggataagcaaatggtttaattcgtcgcaagataatggcgaaatgttaaatgatgag
gagaacctcgagggctctgagaatgagcaggagtcacagcaacctccgccttcaaagcgg
ccacggattcgtatggatgtaactcacccccccggaacattcaatatacagccaagaagt
agaattccagataatgaggaggtcgaccctcgaaaagaagattacattatccacaatgaa
actacaaccgatttcctagaaccttcagtagctggaactagtggggttcgtcgtctagtg
gcgtcgacgcctgcaatccaatcagaaattggcagtatgagcaatcaaaggaacaggaca
aagttcatttcgttaacatcgccacaaaataacggtacggctaatggaacagacgataat
tcagagtccagtgagagcacaagcggatgcagctctctcataccacaagtcaacaggcaa
gaagcaccctcaagtctggggtacaacagatcgtcaacaagcagaaagagatacaatgaa
gataaactaaactatacaaatcacctacagtccccacggtccctctttttggatagcaat
cctagggattcgttgagcagtcggaagccgagcttcaatgtgtcaataatgaataattct
cttgaacgaggacagtcctcgtctccgttttacaacggcaataccacgtttggaggagcc
aacatggcaggattccaacgccgaggacgtacgttgttcaatagtacaaatgaacttcaa
ttgaaagtaccaaaccgaaccaacattcaagtaaagtcaccaaatgtaactggtaccgat
tcatcagccatgagtcaaactgctaaaaggatattggaagcactggagcatttttcatcc
cccatattggatgctaaaaaaattcccatgaatgcaaacaatagctcgtctctgatcggt
ggcaagaaacggcagagggaggaaggttgtgctcccttggctcgggtaggtctgcgtcat
ttgactagggaacttaccgtacctacagtgccagatctcctgaagcttagacgtagacag
agattacaagacaccacagtagcggctaggagaatcgtttcggctcgcagtgcccctcca
ccatctccccaggaatacagattgagatcggacgatgaagagaagtctaaatactcgggc
aaggttaaaagtaaaggtaaaaccgacttggatcaagactatgtgaccgatgcagtcaac
ttaccaagcgtcacactgcctattagtactttgccaacttttgatataaagctaccagta
atcaccagtaacatggccaaaggagtgaaagatgaattattcaagttctctagcccaata
aaagtgacggacacgactaggaatttaaaatctatcaataactttaccttcagcaaacca
atcaatgccagtgttaaagaatccgcagagggtggtcattcactttcgagaacattgagt
tcagaatctgatactttgccagctagattttcgtctagtaataatttcatgtggtccaag
acctcgacagccccgaaattgaaggaaaaacccaaagaggacgtggttgtggatggaatc
aaaacgtccagtaagttaaaaacaggcagcgttatggatgttttgggaaagaaatcagac
ctacttacagatgccaacaaacctgtagttggcatgtgggaatgtaaccagtgtttgttg
aagaacaaccaacacgagcctcagtgcattggttgtaaagcttccaagttactttgcaaa
ggtgataagacaacagaacatacaccggaatcgtcaacgcttaccgttacacagtccaag
cctgtgaccaccgattgtttcggatcacagttcaaaatgagcggcaaccattgggagtgc
cccaattgtgcaacatcgaacaaacaaagtgatgtcaaatgcacgttgtgcgctatgtct
aaatctgaaagcattaaggctccgactatcggttctacatccagtattgttcctgaatca
gtaaaatccgatttaatggaaaaatttaaacctcctgaaggatcgtgggaatgtcctggt
tgtatgctccgaaatcattcatctgtcgaaacttgcccttgctgcaacgcttcaaagcct
ggctccctcaagatcagccctaaaagagtacctgccacatcagaattgttgactaccatt
tcgaatcccggtggaaatcagttggccaataacactgattctgtggagaaaacaaagtcg
accaatgaagatttatgggagtgcttgaaatgtaaacagaaaaattctagagccacttta
atctgtccatgctttagtacttcgaaatccgattctacaagtacaccggcgttaggattt
ggtgacaagtttaagaaacctgagggagcttggacgtgtgacgattgcatggtacagaat
aaagcagacgttatcgaatgcgtagcttgtagtgctgtgagacccggttcaaagaaggta
gcaaaatcaacgtcagccacaggtagtgggtcaaatgtacagttcagttttggagtaccc
gagaatgctggaggtttcaaatttggaattgacaaaagtgatgaaaaagttgacgcgatt
aagcctgtcccttcgtcgacaggttttacctttggcgctaagacagactcacccaaagct
ggcggatttaccttcggtgtacctcagaattcttcaggattcacgttcggtgttgtagat
aatgagaaaaataaattcgaacagaaatcggacactaaggaaactgatgctgttcaaaat
gtgtcgaaaaaacgttcattgaatgtcgaagaaccgaagaatcaagctccgttctcattt
ggtatacccaaaacggaagaggcaaaatcatctgcagaaaaacaatttgcatttggagca
caaccagtagctaatactactgcaaagcaatcattttcctttggagcggtgaaaactgag
gcacctgttaacaaaaaagacacattaccagaagtttacataactgtttcaaacacagaa
tcccagaaattaaatttttcagcaccaactagcgacgctccagcagcaatcttggccaat
gatcaatctagttcaataacaacaaaattatccatcaatacagatattaccaaatctgca
gaaaatcccacatttggcacaataaatgtgcctgtttcacttagcagtgggtcaacagtt
acgacaaccgcagccagcgtcccgacgcccggactcttcacgtttggttctgcaacgacg
attccaaatcaaccaacgacagttccgagtcaagtggtgcaaagttttggtcaaattcca
gtatcagctccaacatcagtgccgacgccttcaatgtttgtttttggatccaccaagcag
gcgagtacaatagccgccacgacacatcctgataaatctgaaattgtatcttttggctcg
accaacagtcctgcgtttaatgctatcacttccgcgccacgtttcgaaggtaacgaaaat
aagcaagcaccgtcgtttggcatgacggacaacaagcctgccccgctttttggagcgggt
gaaacaaaggctccagtttttggagctgctcaggataataacaaaatgataccagcgttt
ggaagtatcaaaaagacagcatcaacatcagtgtttaactccacaacgccagcatttgga
gtctcttcttctacccctgcattcggaactgcggccccggcgttcggaacaacgtccaca
cctgcatttgggaccaatccgacaccgagtattttcgggacgtcgaaaccagtggaaact
gcaccgtcttccacttctgggttgtttgcatttggcggaagttctactcaacctagcgcg
tctcaagcttccagtggattcaatttctcgcaaaacccaactccggcgtctgtgcaaccg
atggctcaaaaatctttgttcgcatttggaaatactagcaccaacacacagcagtctgac
ggtaccgggtttggagctgccgccaacttcaatccacctgccgcctcggatacaactgcg
ggaacttttgtattcaatactcccaagccggacgcagccccaccattttccctaattgcg
cctacttccacatcgatatttggcactcctcaggctgctcctaattttggtcagagtcaa
tcaacgtcggcgtttggttctgtggctctaactcccaatgctagtttcaactttggaggc
tccgctactcctgcgccttccggattcaactttggtggagcagcaacagctgctgcgcct
actggcggttttccattcaacgcaccgaactcgaatcagggtgttgccttcaatcccaac
acgccaccgacgttcaacttcactggaggcagtgcaccaacagcattcaatgctgtacct
cagactatacctcaggctacaacccaggcaacaccgcaaagaaaattcaaaaaagcagtt
cggagaacacagcctcggtag
DBGET
integrated database retrieval system
