Neodiprion lecontei (redheaded pine sawfly): 107222371
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Entry
107222371 CDS
T09006
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107222371
Membrane trafficking [BR:
nlo04131
]
Protein recycling
Others
EARP complex
107222371
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
UBR1-like_wing
Utp13
DUF4037
DcpS_C
Motif
Other DBs
NCBI-GeneID:
107222371
NCBI-ProteinID:
XP_015517197
UniProt:
A0A6J0BSB9
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Position
7:complement(19307165..19312156)
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AA seq
947 aa
AA seq
DB search
MDESKVGVLLRKHIDMEDIKFKFLSLIHKQNQAKIPSMGLNPDLLNPIESQGLNDIQSDA
SHSTESELLPDQDILESIESVYYESDDCFDCCRHELQKLPEVLNSKVIERDYKRLKQEHQ
VVSKKVLQLILQKQSLCQKEFERILYIQEELQNALEICRSGRMDLSLAKKQFTTASLGIL
ANYQKKQVVQGLLHSLNTIKTLQRTEDRLQELLNEGNYPGAISLLLECQRAAERYKHFHC
VAALNGKLQDTLEQAEETLDQTLAKMCTEFEVGTYLSVQGAYRLLGKTQTAMDQLHMHFT
AAIHNVAFMAVHAFTGGDTKRPYKQLCQSVSHETFLPCLIELCKSLWAILISYCQVVNWH
NTHESWSDETEEKDLEATFNKQYVKQKLENGMSRMWHDVETKISTYLLGADLAYFKFEQF
VQILGIVHRLIEVGEELCSSQSENLQESIRKQCSSYFAHYHASRLDELKIFLENDGWELC
PVKPSFVVTQLQEFKSLKTVLNSCKPRNSPDESTLSQDGSSVIGGLVQRYLDNGVTPFDV
ILDEAADEDILANIGDAPSGYFSDDSDDDIPEELKCDFVDEPDQSKPSKKKHKQQFAGPM
VTNTTLSVLRVCGKYLQMSRLFRSIAVTVIQNMTQFFELCLYTVHMFFTSDLQINSDTLY
TPKLKLTLARIRETLMADSAVTTESGAQSHKVTQPCLSSIVNLTQPEKIHGLMKRVIAVE
SLIFLGQQYEILRPYLEHLVASPCHGFLHQFYSQTIAAATDLRKPVYMAAASQSFDVGGI
LTLMSKVNWEVRDVMSQHSSYIDNLLRDIQILSMRLEEIGNRIPLPIIVYNSVWENIAHL
ITHTLVEGFSNAKKCSNGGRALMQLDFTQLMSKFEKLTSLRPMPHREYVEAYVKAYYLPE
NILEEWIKQHKEYSTKHLIGLISCGCQNNKKTRQRLISIIEEERPSR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtaaagtgggagttttgttgagaaaacacatcgacatggaggatatcaag
ttcaagttcttatcgctgattcacaagcagaatcaggctaagatcccgtcaatgggattg
aatcccgatctcctcaacccaatcgaatctcaaggccttaacgacattcagtccgatgct
agtcattcgactgaaagcgagctgcttcccgatcaagacattctggaatccatagaatct
gtgtattacgagagcgatgactgctttgattgttgtcgtcatgagttacagaaacttccc
gaagttctgaattctaaagtaatcgaaagagactacaaaaggcttaaacaagagcaccaa
gttgtttctaaaaaagtgttacagctaatattgcaaaagcaaagcttatgccaaaaggag
ttcgaaagaatcttgtacattcaagaagaacttcaaaatgccttggaaatttgccgaagt
ggaaggatggatttaagccttgctaaaaaacagttcaccactgctagtcttgggattttg
gctaactatcaaaagaaacaagtcgttcaagggcttctgcatagtttaaacaccataaaa
accttacaacgaacagaggaccgccttcaggaacttctgaacgaagggaattacccagga
gcaatatcgctgctccttgaatgccaaagagctgctgagagatataaacattttcattgc
gtagccgcactgaatgggaaactccaggacaccttggaacaggcggaagaaactctggat
caaacgctggcaaaaatgtgtacagaatttgaagttgggacgtatttgtctgtccaagga
gcgtacagacttctcggaaaaacccagacggcaatggaccaacttcacatgcactttaca
gcagctattcataacgttgcttttatggcagttcacgctttcaccggtggtgacacaaaa
aggccttataaacagctctgccagtcagtctcgcacgagacatttctaccttgtttaatc
gaactgtgcaagtctctctgggccattttaatttcctattgtcaagttgtcaattggcac
aatacgcatgaaagctggtcagatgagactgaagaaaaagatctagaagctacctttaat
aaacagtatgttaagcaaaagctggaaaatggaatgtccagaatgtggcacgatgtagaa
accaaaatatccacgtatttgttgggcgctgatttggcctacttcaagtttgagcagttt
gtacaaattttgggaatcgttcataggttaatcgaagttggggaagagctctgctcaagt
cagtcagagaatctccaagaatcaataagaaaacagtgctcttcctactttgctcattac
cacgcgtctcgattagacgagttgaagatatttttggaaaatgatggctgggaactttgt
cctgttaagccatcgttcgttgtcacgcaactgcaagaatttaaaagcttgaagactgtc
ctcaatagttgtaagcctcgcaatagccctgacgaatctaccttgagtcaagatggtagt
tctgtcattggaggactggtccaaagatatttggataacggtgtaacgccctttgatgtc
atcctggatgaagctgctgacgaagacattttggccaacattggagatgcaccttctggg
tatttttcagacgattctgacgacgacattccggaggaactgaaatgtgattttgtagat
gagcccgaccaatcgaaaccctcgaaaaaaaaacataaacaacaatttgctgggccaatg
gtaacaaacacaacgttgagtgtgctcagagtttgtggaaagtatctacaaatgtcaaga
ttatttagatccattgctgttactgttattcaaaatatgacacaattctttgaactgtgt
ctttacactgtacacatgttcttcacttcggatctgcaaataaacagcgacacgttgtac
actccaaaattaaagttgaccttggctcgaatacgcgagactttgatggcagacagtgca
gttacgactgagagtggagctcagtcacataaagtaacacaaccgtgtctctcttcgata
gtgaacttgactcagccagaaaaaattcatggcttgatgaaaagagtgatagccgttgaa
tctctgatatttttgggacagcagtacgaaattttgaggccttatttggagcacctagta
gcttctccctgccacggatttcttcatcaattctattcccaaacgattgcagcagctaca
gatctccgaaaacctgtttacatggctgctgcatctcagtccttcgatgttggcggtata
ttaacgctgatgtcgaaagttaattgggaagtgagagatgttatgtcacagcacagcagt
tatattgacaatctattaagggacattcaaattttaagcatgaggcttgaggaaattggg
aacagaataccacttcctataatagtgtacaattcagtgtgggaaaatattgctcacttg
atcacacacactttagtcgaaggtttctcgaatgcaaagaaatgttcaaatggaggcaga
gccttgatgcagttggattttacccaattaatgtcgaagtttgaaaaattaacatctttg
cgacctatgccgcacagagaatacgtcgaggcatacgtcaaggcttattatttgcctgaa
aacatattggaagaatggataaagcaacataaggaatattctacaaaacatttgatcggt
cttatatcgtgcggatgtcaaaacaacaaaaaaacccgacagcgattaatatccatcata
gaggaggaacgaccgagcagataa
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