Neodiprion lecontei (redheaded pine sawfly): 107222467
Help
Entry
107222467 CDS
T09006
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107222467
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
107222467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Vir1p
Motif
Other DBs
NCBI-GeneID:
107222467
NCBI-ProteinID:
XP_046593751
UniProt:
A0ABM3G0G3
LinkDB
All DBs
Position
4:25701775..25720202
Genome browser
AA seq
2185 aa
AA seq
DB search
MMSILYEKRPLKRPRLGPPDVYPQEPKQKEDELTLVNVKHGFATMPQLSDEFGSAKQCNV
TAAKVGAYFNGILAKKEEFATMPDTGRKRQQINPKDNFWPVTARTKNGIEAWFKDLSGCK
PLLALAKKAPNFNKKEEIFMMLCEYQVPMLRAAWFIKLSSAYTVAVSEAKIKKRQLPDPT
TEWTGTLIKFLKDQLTKLQEYYHMNHNISNGMSNSTNGSNLNNNSTNNTVNNQPTTPNPN
PGTTVGPAMNEDHKLALKQWHYCIQLAKYMFEEGLLDRQELLQWILELLDKMRSAPLDDG
ILKLLLPLALQYLEEFVQSELLARKLAYLCCRKIAQMCSNVENSNNPQSPMVTASVKSEV
SNIKENPIAPMPVNPFTVTFNDYINCPHHRDIILGLSAIIQVITIECPTALVWNSVGEGK
APSVLNGSPLDHLPSPPSALPCPPASSINPTMKQIKVAQESIRRRSLAAEGRWSCDKWQQ
SSAGMTTTKVLAALDALDRHSFDRMDALNSLDTLYAKIFTATPKENTNERDTKVEYSPQQ
DAAIIEILCEWAVSSERWGEHRAMAVAKLLEKRQSEATGETNDNDDKDSVCSNASPPGLP
IFQPLLMKFLDTDAPILDHSSSQSKAQFTNLVHLFSELIRHDVFSHDAYMCTLISRGDLI
QGPAASKPSTPNNREPIDEDSLFPGIDLKPAKLEVPDHGRTMDYDDSKIDDDLDKLLQHI
KEDQQNSMDAPDSPKEDALGGHNAHDGLDSKSPNPCRHLLYTTHFPLPQDETCSQHDCNQ
RHVLLYGVGRVRDEARHVVRKMTKEICKLFGKKFSIDVAEGGKVKKHSRSEFNFEAVTQK
FQNLSYFDQHVVTWQCATQVIEMLNTFALAGSSYLPVQEHVAFLFDLMELALNIYGLIDV
CIQILKELPEIEAQLTVRNSQLVRSYTTSLSLYVVGVLRRYHCCLLLAPEQTTAVFDLLC
KVVKHVSNPSDCSSAERCVLAHLYDLYSSCSLLKTKPHGVEAFSNAYPKIRTALYSALQP
TPSNHVYNSQFMIDVFSSPRRSGKIEPQWARQLNETPANRYSFVCNAIIVAVSSETDNDK
LNDVAIICAELTACCNALSAEWLGVLMALCCSSNSSSFYIDVLNQVDVQNLNVRNSLAVF
TSILIARHCFSLEDFVVHIALPSLVKACNEGRGDADMEAEAGALLTCHLLLQLFKTVECP
QPALYSVSTSPHPLPSGNLRRYSIKLSCDRHLLAAAHNNIRVGPVLAVLKAILVVGDATA
GKLPPKKPDIPMAHSNKAGPGSVGASERESISHILGTSDILGGGDDLGLDLGLSSSNVNM
ETENVKGLSAFAQHVLRQICSQEWVLERCLQNPEELCHPDMLLDNMLTPRQAQRLLHMIC
YPDTLIDTFLDQKTHITNILENLEQWSLRMSWLDLQLMYKQYPAGSSDLTQWLDTVAKAA
IDVFQLNTTSGKPDKKSGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSKASREKGR
SKSPSLFNHQPFLSLVLTCLKGQDDQREGLLTSLHSQLTQFLNMSKEEKNIGLEDPKTRE
VLQDALQLRFSLVGGVFDTIQRNTTVTTDWAILFVQLISYGVIDLNNNSELFTTVIDMLA
TLIHSTLVSDSQSEKDENKKHYQNLMKKLKKELGDRNSQSIQFVRQLLPLPKVTMEVIAC
EPVGCLTDTKGNKIAGFDSIDKKQGLQVCDSQKVSAWELLEGHKNPAPLSWAWFRAVKME
RKPLTYQGAQKLLRYHTHSAIKPASHYLDPPPLPPEDLEPDKKESEPGKADTPMSVESPG
RTGKGKAMKPRKPRKNKGAATPTAPIPQQLQQQGPPQMQQIPYGQQPQVVQQQAMFPGQP
QQPQQQWYPNQQGPTPQQQYGYGQQIPPAQVSGHRYERPGMNNQSKQALSNMLRLRVPSN
QFMGGQQQPGAPPGPGPAAYQGMQRPQFIRQQLRTQHAGPGLNPQQTMFPPQQQQQGIYA
GMQQGMNQNYAGYGGQQMLPQQQQQQMLQQPQQQQQQQQQQQQQQQQQQQQGMMNQQQNM
MFQNPQQMIGAQRGQEYMPQQRMQPGTARPPYHQAPNVTMNTMGPMGGGVQNQPAPPYRQ
ASGKPGSVGVAGVGAGGVGLQQQNQQFQQQAINQQRMRHMLAMQQQQQQQGGGGGQQPTP
QLVAHLQRHSNQPPQHPYQHQPPPY
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcatattgtatgaaaaacggcctttaaaaaggccaagattaggccctcccgac
gtatatccacaagagcctaagcaaaaggaggatgagcttacactagtgaacgttaaacat
ggttttgctacaatgcctcaattatccgatgaatttggatcagccaagcaatgtaatgtc
actgctgcaaaagttggtgcatatttcaacggtatacttgctaagaaagaagaatttgcc
acgatgcctgatacgggaagaaagagacagcagattaatcctaaggataatttttggcct
gtaactgccagaactaaaaatgggattgaagcttggttcaaagatctgtctggctgtaag
cctttgctggccttggccaagaaagcccctaattttaacaagaaagaagaaatttttatg
atgttatgtgaatatcaagtaccgatgctgagagccgcttggtttattaaattaagttct
gcttataccgttgctgtttctgaagcaaaaattaagaaaagacaattacctgatccaaca
actgaatggactggtaccttaataaaatttctaaaagatcagctgaccaaattacaagaa
tattatcacatgaatcacaatatctctaatggcatgagcaacagtaccaatggtagtaat
ctgaataataacagcaccaataatactgtgaataatcaaccaactacaccaaacccaaat
cctgggacaactgtgggtccagctatgaacgaagatcataaattagcacttaaacagtgg
cattactgtattcaattagccaaatacatgtttgaggaaggattgctcgataggcaagaa
ctgttacaatggatcttagaacttctcgataaaatgagatctgctccgttggatgatggg
attttgaagctcttattaccattggctttgcaatatctagaagagtttgttcagtcggag
ttgttagctagaaaattggcatacttatgctgtcgtaaaatcgcacagatgtgcagcaat
gtagaaaacagcaataatcctcaaagtcctatggtcactgcctctgtaaaatcagaagtg
agtaatataaaagagaatcccattgctccaatgccggttaatccatttaccgtgactttc
aacgactatattaactgtccacatcacagagacataatcttgggattatcggctataatt
caggtaattacaatcgagtgtccgaccgccttagtttggaatagtgtcggagaaggtaaa
gcaccatcagttttaaatgggtctccattagatcatctgcctagtcctccatcagcttta
ccatgcccccctgccagttcgataaatccgacgatgaaacagatcaaggttgctcaagaa
agtattcgcagacgatcattagctgctgaaggccgatggtcgtgtgacaaatggcagcag
agtagtgccggtatgacaacgactaaggttttagctgctctggatgctttagatcgtcat
agttttgacagaatggatgccttaaactctctggatacactgtatgctaaaatattcact
gctacacctaaggaaaatacaaatgagagagacacgaaagttgaatattctccgcagcaa
gatgccgctattatagaaattttatgtgaatgggcggtaagttcggaacgatggggcgag
catagagcaatggctgtggctaagttgttggaaaaacgtcagagtgaagctactggagaa
actaatgataatgatgacaaagacagtgtttgtagtaatgcttcaccaccagggttgcca
atttttcaaccgctactcatgaaatttctagataccgatgctccgattttagaccatagt
tcttcccagtccaaagcacagttcaccaatttggttcacttattttccgagcttattcgt
cacgacgtcttttcgcatgacgcatatatgtgtactttgatatctcgaggggatctgatc
caaggaccagctgctagtaaaccaagtacaccgaacaatcgtgaaccaatagacgaagac
agcttatttcctggaattgatttgaaaccagctaaattggaagtgccggatcacggaaga
acaatggattatgatgatagtaaaattgatgatgatttagataagttgctacaacatatt
aaagaagatcaacagaatagcatggatgctccagacagtccaaaggaagatgccttgggt
ggccataacgcacatgatgggctagattctaaaagtccaaatccatgtagacatttactt
tatactacacattttccattgccacaggatgaaacctgcagtcaacatgactgcaatcaa
cgccacgttctgttatatggtgtaggacgagtacgagacgaagcaagacatgtcgttaga
aaaatgacaaaagaaatttgcaaattatttggaaaaaaatttagcatcgatgttgcagaa
ggtggcaaagtaaaaaaacactcacggagtgaattcaattttgaagctgttactcaaaag
tttcaaaacttgagttattttgaccaacacgtcgtcacgtggcaatgtgctacacaagtc
attgaaatgctaaacacatttgcattagccggatcatcttacttacctgttcaggaacat
gtcgcattcttatttgacctaatggaacttgcgctgaacatatacggacttattgatgtt
tgtattcagatattgaaagaactgccagagattgaagcacaattgacagtcagaaatagt
cagctcgtcagaagttacaccacgagcttgagtttatatgttgtcggagtgctaaggcga
tatcattgttgtttattacttgctccagaacaaacaacagcagtgtttgatctcctctgc
aaagttgtcaagcatgtttcgaatccaagtgactgtagctctgctgaacgttgcgttttg
gcacatctgtacgatttgtactcaagttgttcattattgaagacaaaaccccacggtgtg
gaagctttcagtaatgcataccctaaaattcgaacagctttgtacagcgcattacaacca
actccatcgaaccacgtttacaattctcaattcatgattgatgtctttagtagtccaaga
cgtagtggaaaaattgagcctcaatgggccagacagctgaacgaaactccggcgaatcgt
tatagctttgtatgcaatgcaattattgttgctgtgagcagtgagacagataatgataaa
ttaaatgacgttgcgataatttgcgcagagcttacagcctgctgtaatgctctgagtgcc
gagtggttgggtgtcttaatggcattatgttgttcatccaacagttcatcattttatatc
gatgttttaaatcaagttgatgttcaaaatttgaatgtccgtaattctttggccgtgttt
acatcgattttgattgccagacactgcttctccttggaagattttgtagtgcacatagca
ttgccgtctcttgtaaaggcttgtaatgaaggccgcggtgatgcggatatggaagctgaa
gcaggtgctctgttaacttgccacttacttctacaactattcaaaacagtcgagtgcccc
caaccggctttatattcagttagcaccagtccgcatccgctgcccagtgggaatttgaga
cgttacagtataaaacttagctgtgacagacacctgctagccgctgcccacaataatatc
agagtcggacctgtattagcagttttaaaagcgattctggttgttggtgatgctacagca
ggtaaactgccgcctaaaaaaccagacattccaatggctcactctaataaagctggtcca
ggcagcgtgggtgctagtgagagagagtctattagtcacatattgggcaccagtgacatt
ttaggcggaggcgatgacttgggtctcgaccttggattatcatcaagcaatgttaacatg
gagacagaaaatgttaaaggtttgtcagcttttgctcagcatgtattgcgccagatatgc
agccaagaatgggtgctggaaaggtgtctacaaaatcccgaagaactgtgtcatcccgac
atgcttttggacaacatgttaactcctcgtcaagctcaaagattattgcacatgatatgt
tatcctgacacgcttatagacacatttttagaccagaaaacgcacatcacaaatatactg
gaaaacctcgaacaatggagtctacgaatgtcttggcttgacttgcagcttatgtacaaa
caatatccagcaggttcgagtgatttaacgcaatggttagatactgtggctaaagcagca
attgacgtgttccaactgaacactacctccggtaaaccggacaagaagtcaggttctata
tggttggtagcacctttggtatcgaagctgcctagtgctgtacaaggtcgtgttttaaaa
gtagctggacaagtgttggaatctggtaattggtctaaagcaagcagagaaaaaggcaga
tcgaaatcaccgtctctgttcaatcatcagccatttttatctctagtattaacctgttta
aaaggacaagatgatcaaagggaagggttgttaacatctctgcactcacagttgacacaa
tttttgaatatgagcaaggaagaaaaaaatattggtttggaagatccaaaaaccagggaa
gtgttacaggatgctcttcaactgaggttcagtttggtgggtggagtttttgacacaatt
caaagaaataccaccgtaacaactgactgggcgatcttgtttgtacaattgattagttat
ggtgtcatagacttgaacaataattcagaactatttacaacggtaatagatatgttagca
actctgatacattccacgcttgtttcggattcgcagtctgagaaagatgaaaacaaaaag
cattatcagaatctgatgaaaaaacttaagaaggaattgggtgatagaaattcacagagc
atacaatttgtaagacagttgttacctttgcccaaagtgacaatggaagttatcgcatgc
gaacctgtcggctgcttgacagatacaaagggcaacaagatagctggatttgacagcatt
gataaaaaacagggtttacaagtatgtgactcacaaaaagtatctgcttgggagttatta
gaagggcataaaaatccagcaccactatcttgggcctggtttcgagctgtgaaaatggaa
agaaaaccactgacttatcaaggagctcaaaagttgctacgttatcatactcatagtgca
ataaaacctgcaagtcattatttagacccaccgccactacctcccgaagatttagaacca
gataaaaaggaatcagaacctggaaaagctgatacaccaatgagtgttgaatcccctggc
agaacaggcaaaggaaaggctatgaaacctagaaaacctagaaaaaacaaaggcgcagct
actccaacggcaccaatacctcagcaactgcagcaacaaggtccaccgcaaatgcaacag
ataccgtatggtcaacaaccgcaggtggtacaacaacaagcaatgttccccgggcaaccg
caacaaccgcaacagcaatggtacccaaatcaacaaggaccaacaccacagcagcagtat
ggttacggacagcaaattccacctgctcaagtcagcggtcatcgatacgaacgtcctggc
atgaataaccagtcgaaacaggcactatccaatatgctacgccttcgcgtaccatccaat
cagtttatgggaggacaacaacagcctggtgcacccccaggacctggaccagctgcatac
cagggtatgcagagaccacagttcattagacaacaattgcgaacacagcatgctggccca
ggattaaatccccagcaaactatgttcccaccacaacagcagcagcaaggaatatatgct
gggatgcaacaaggaatgaatcaaaactatgcaggttacggagggcaacaaatgttgcca
cagcagcaacagcagcaaatgttacagcagccgcagcagcagcagcagcaacagcagcaa
caacagcaacaacaacaacagcagcaacaacaaggcatgatgaatcagcagcagaatatg
atgttccagaatccacagcaaatgattggtgctcaaagaggacaagaatatatgccgcag
caaagaatgcagccaggtactgcccggccgccttatcatcaggcaccaaacgtcacaatg
aacactatggggccaatgggtgggggagttcaaaatcaaccagctcccccatatagacaa
gctagtggcaagcctggttcagttggagttgctggtgttggagcaggtggtgttgggtta
cagcaacaaaatcaacaattccaacagcaagccataaatcagcaacgcatgcggcatatg
ctagccatgcaacaacaacaacaacagcaaggtggaggtggtggacaacagccgacacct
caattggtagctcaccttcaacgacattcaaatcaaccaccccaacatccttatcaacat
caacctccgccgtattaa
DBGET
integrated database retrieval system
