Neodiprion lecontei (redheaded pine sawfly): 107222734
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Entry
107222734 CDS
T09006
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X2
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107222734
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
107222734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
PTase_Orf2
Motif
Other DBs
NCBI-GeneID:
107222734
NCBI-ProteinID:
XP_015517710
EnsemblRapid:
ENSNLCG00000006718
UniProt:
A0A6J0BTB0
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All DBs
Position
2:complement(4250615..4258236)
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AA seq
1356 aa
AA seq
DB search
MSNEAQISNIVNDILRVEPIEEAFSCFLVHHLDNEIEKIAGLQSELTSAMTGLNTEQQEN
GVRQFLNMAAALTNHSRLQLLLSLLENLVMSNVLPARLVCECILSCDKLQYQQEDFWVES
FNLIRRIIGGVDYKGVREIMKGCREKAQTIPARLNASVQPQLKALENVIEYIFDRNACLL
PGYFIVNEIQKAYPDNKNWPHWKLAKLLSGFVESFRATAQMVSIIGHSKMLPVVEHSGYA
DHVINPWRLDPTTLKFSLKGNLPYDQDLLKPQTELLRYVLEQPYSRDMVCSMLGLQKQHK
QRCVALEEQLVELVLLAMERSENDPPPTEGTDITVANHWLWLHLSSQLIYFVLFQFACFP
NIVMAIHDKLAGRELRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLP
VPDFSQALCTHQMAITCIWIHLLKKAQSEHLNIHRPIPHTLKVHHEFLQHLVMPNTSLCM
GSDYRIALLCNAYSTNQEYFSRPMAALVDTILGTQKGQQQQPLQPLQSNAALANGPTTPL
SMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIKG
FISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHL
CVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGAD
SLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLNEFFQQNSVPKENKQQIKKAVEEEYR
NWASMSNENDIIAHFSVPGTPPLFLCLLWKMIFETDRISPIAYKILERIGARALSAHLRK
FCDYLVFEFANSVGGQHVNKCVDTINDMIWKYNIVTIDRLVLCLALRTQEGSEAQVCFFI
IQLLLLKAVEFRNRVQEFAKENSPEHWKQSNWHEKHLAFHRKYPEKFAPEGIMEQTTGGP
SQYQSLPVYFGNVCLRFLPVFDIVIHRYLEIPPVTKSLEILLEHLGCLYKFHDRPVTYLY
NTLHYYERKLRERPALKRRLVSAVLGSLCDIRAPNWALSEAYQLYMTRSPDDAVNWVPEL
DYYVRLVRRIVETMSGIAHFPTTDWRFNEFPNPAAHALYVTCVELMAVPVAPNLIANSLL
DVVAKGYTVVPSEQIHMWINCVGLLLAALPECYWSALHERLVETVTSRGLANWQYSNLTP
FQIFNFNITHNGLLENKYSYMIALAHSIWHHAGVGQITTMPQFIKEKLQPVVNSEEQLIF
ACHLIGPTLARFNAERPRCVVELAVSLYEMLEQADRSQAHLKYMDPICDLLYHIKYMFVG
DMMKNEVECIIRRLRPALQMRLRFIAHLNIEEINSS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaggcgcaaatatcgaacatcgtcaatgacattcttagagtggaacctatc
gaagaagcattcagctgttttctcgttcaccatctggataatgaaattgaaaaaatagca
ggattgcagtcagaattaacatctgctatgacaggtctcaatactgaacaacaagagaat
ggcgttagacaatttcttaacatggctgctgcgctgacgaatcatagtcgcttacaactt
cttctgtcgttactggagaacttggtcatgagtaacgtattacctgcaagattggtttgc
gaatgtatcctcagctgtgataagctgcagtatcagcaagaggatttttgggtcgagtct
tttaacctcatcagacggatcattggaggagtggattacaaaggtgtcagagaaataatg
aagggctgcagagaaaaggcacaaacgataccagcaagacttaacgcatctgtacagccg
caattaaaggcgctggaaaatgttatcgaatatatatttgacagaaatgcatgtctattg
cctggctattttattgttaatgaaatacagaaggcctatcccgataataagaattggccg
cattggaaattagcaaaactgctctctgggtttgtcgagagtttcagagccactgcgcaa
atggtgtctataatcgggcactcaaaaatgctacccgtagtagagcactctggatatgcg
gaccatgtcatcaacccatggaggctcgatcctacgacccttaaattctccctcaaaggc
aatttaccctacgatcaagatttgctaaaacctcaaaccgaacttttaagatatgtcttg
gaacaaccgtacagcagagatatggtttgctccatgctaggcctccagaaacagcacaaa
cagaggtgcgtagcattggaggaacaactggttgaattggtacttctggctatggagcga
tccgaaaatgatccaccacccactgagggaacagatattactgttgcgaatcattggctg
tggctacacctttcttctcaacttatatacttcgtactttttcaatttgcttgttttccc
aacattgtgatggccatacatgacaagctagctggtcgagaattgcgaaaggggcgtgat
catctgatgtgggtcctattgcagtttatatctgggagtattcagcgtaatccgctgtct
aactttctgccagtacttaaactgtatgacctattataccccgaaaaggaaccactacct
gttcctgatttcagtcaggcattgtgcacacatcaaatggccatcacgtgtatatggatt
catttacttaaaaaagcgcaatccgagcacttgaacattcacaggccgatcccacacacg
ctaaaagttcatcatgaatttctacaacatttagttatgccaaatacatcattgtgtatg
ggatctgattatcgcatcgctttactgtgcaatgcttattcaacgaatcaagaatacttc
agtagacctatggctgcacttgtcgatacaattcttggcacacagaagggacaacagcag
caacccttacagccactacagagcaatgctgctcttgcaaatggaccaacaacgccattg
tctatgtccattcttgattctcttactgtacattctaaaatgagtctgattcacagtatt
gttacacacgttatcaaactagctcaatctaaaagcaacatggctcttgctcctgccctt
gtcgagacctacagcagattgctggtgtacactgaaatagaaagcctcggaatcaaaggc
ttcataagtcaactgcttcccacagtattcaaatctcatgcttggggaacactgtatact
ttgctcgagatgtttagctacagaatgcatcatattcaaccacattacagagttcagctg
ttgtctcatcttcacagtctcgccgcagtaccacaaacaaatcaaacccaactccatctc
tgcgttgaaagtacagctcttaggctaataactggtttaggatctgccgaagtgcaacct
caattatcccggtttttatcagagcctaaaacgctggtgtctgctgaatctgaagagttg
aatcgagctttagttctcacactcgcaagatcaatgcatgtcacagggacaggagcagat
tcattgagtggtacatggtgcaaggaactgctgaatacaatcatgcaaaatacccctcac
tcgtgggccaatcatactctccaatgttttcctccagtattgaatgaatttttccaacaa
aatagtgttcctaaggaaaacaaacaacagatcaagaaagcagtcgaagaggaatataga
aattgggcatcgatgagcaatgaaaatgatataatagcacatttctctgtgcccggaaca
ccacccttgtttctatgtctcttatggaaaatgatatttgaaacagatcgtataagtcca
attgcgtataaaatattggaaagaattggcgcaagagctctttcagcgcatcttcgaaaa
ttttgcgactacttagtttttgaatttgctaacagcgtcggaggtcagcatgtgaacaaa
tgcgttgataccattaatgacatgatctggaaatacaacattgtgacaattgataggctg
gtgctctgtttggcactacgaacacaagaaggcagcgaagctcaagtttgctttttcatt
atccaattgcttttattgaaagctgttgaatttcggaaccgcgttcaagaatttgcaaaa
gaaaattctccagagcactggaagcaatcaaattggcatgaaaagcatctcgcatttcat
cgaaaatacccagagaaatttgctcctgaaggaataatggaacaaaccaccggaggcccc
agtcagtaccaaagtctgcctgtatactttggaaatgtgtgcctacgattcttaccagta
ttcgacattgtgatacacagatatctcgagatacccccagttactaagagtttagaaata
ttactagaacacttgggatgtctctataaatttcacgatcgacctgtcacatacctttat
aacacgctgcattactacgaaagaaaacttagggaaaggccagcactgaagcgacgccta
gtctctgctgtgcttggctcattgtgtgatattcgggctcccaattgggcactatccgaa
gcttatcagctatacatgacgcgatctcctgacgacgcagtcaactgggtgccagaatta
gattattatgttcgacttgtgcgtcgtattgttgagaccatgtcagggatcgcacatttc
ccaacaactgactggaggttcaatgaatttccaaatcctgctgcgcatgctctttatgtt
acctgcgtggagctcatggctgtacctgttgctccaaatttaatagccaattctttgctt
gatgttgtcgccaaaggatatacagttgtaccatcagaacagatacacatgtggatcaac
tgcgtaggattattgttggctgctttacctgagtgttactggtcagccctccacgagcgc
cttgtggaaacagtgacgagtcgtggactggcaaactggcaatatagcaacttaactcca
tttcaaatattcaattttaatattactcacaatgggttattggaaaacaaatatagttac
atgatagctctggcacattccatttggcaccatgcaggagttggtcaaatcacaactatg
ccacaattcatcaaagaaaaattgcaaccagtcgtcaacagcgaagagcaattgatattt
gcttgccacttgataggaccgactttggcacgatttaatgcagagagacctcgatgcgtc
gttgagctcgctgttagtctgtatgaaatgcttgaacaagcggaccgttctcaagctcat
ctcaaatatatggatccgatttgcgacttgctataccatatcaaatacatgtttgtgggt
gatatgatgaaaaacgaggttgaatgcataattcgcagactaaggcctgcgctgcaaatg
cgccttcgtttcattgcccacctcaacattgaggaaataaactcatcctga
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