Neodiprion lecontei (redheaded pine sawfly): 107222890
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Entry
107222890 CDS
T09006
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107222890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlo03041
]
107222890
03009 Ribosome biogenesis [BR:
nlo03009
]
107222890
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107222890
Spliceosome [BR:
nlo03041
]
Complex A
U1 snRNP components
U1 related factors
107222890
Complex B
107222890
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107222890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107222890
NCBI-ProteinID:
XP_015517909
UniProt:
A0A6J0BU40
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All DBs
Position
3:21812770..21819850
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AA seq
597 aa
AA seq
DB search
MGRYRSRSRERDRRRKSRSRSRSRSPRDRRGWGGPGGGGGGGGPGRDRAGGGGGGRGGRG
QPGANLRKPRWDLSRLEPFKKDFYVPSDVVQHRDPRAVEQYRSDKEITLKGRNIPNPVFT
FEEAGFPDYVLKEVKRLGFKEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVH
INSQPKLSRKDGPVALVLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLD
GGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT
LMWSATWPKEVKNLAEDFLKDYTQINVGSLQLAANHNILQIIDVCQDYEKENKLSTLLKE
IMAENENKTIVFIETKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPIL
VATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKAND
LIQVLKEANQVINPKLLELTDSRGGGSGGGGGGGGIFGRHRGGRSRWRSKGGGSGAGGGG
RGGRDRSFSRSRSRSRSRERNGRGGGRRSYSRSYSRSRSPVNNRTEVIGKSYWSSER
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttatcgaagccgtagccgagaaagggataggaggcgcaaatctcgcagtcgg
tcccggagtcggtcacctagagatcgacgtggctgggggggacctggtggtggaggagga
ggaggaggtccaggacgcgacagagcgggtggtggaggtggtggccgcggaggcagagga
cagcctggggctaatctcagaaagccacgctgggacttaagccgtttagaaccattcaaa
aaggacttctatgtgcctagtgatgtcgtacaacatagggatcctcgtgccgtcgagcag
tacagaagtgacaaagaaatcacccttaaaggaagaaacatacctaatcctgtattcacc
tttgaagaagcgggatttcctgattatgttctgaaagaagtcaagaggcttggattcaag
gagccgacatcaattcaagcccagggatggccaattgctctgagtgggcgggacatggtg
ggaatagcttcaactggatcaggaaaaaccttgtcttacatactgcccgccatagtacat
ataaatagccagcctaagctaagtcgcaaagacggtcctgtagctttagtcttggctccg
acacgagaattggctcaacaaatacagcaggtggctgacgactttggtcattcgtcaggc
atcaggaatacatgtttatatggaggtgcgccgaagggtgcgcaggctagggatctcgat
gggggtgtagaaattgtgatcgcaacacccggtagactattggactttttagaatccggt
cgaacaaacctgaaaagatgcacatatctagtactggacgaggctgatagaatgcttgac
atgggattcgagcctcaaattagaaaaatcatagaacaaattagacctgatagacagaca
cttatgtggtctgcaacatggcccaaagaggtaaagaatctggccgaagactttcttaag
gactacacgcaaataaacgttgggtctcttcagcttgcagctaatcacaatatccttcaa
attatcgacgtgtgtcaagattacgaaaaggaaaacaaacttagcacattgttgaaagag
ataatggctgagaatgagaacaaaacgatagtttttattgaaactaaacgcagagtggac
gagataactagaaaaatgaagcgtgacggctggcctgcagtctgtatacatggggacaaa
acgcaacaagaaagagactgggttttacaagattttcgatctggcaaagcaccgatacta
gtagccactgatgtagcagcacgaggtcttgacgtggaagacgttaagtttgtcatcaat
tttgactacccttcgtgttccgaggactacgtccacagaatcggccgaacaggtcgaagg
cagaagactggaactgcctacacctttttcactccaaacaactcaaacaaagcaaacgat
ttgattcaagtattgaaagaagctaatcaagttataaatcctaaactactggaactcact
gatagcagaggtggtggtagcggcggcggcggcggcggcggcggtatatttggaaggcat
agaggaggaagaagcagatggcgttctaagggtggaggaagtggagcaggaggaggaggg
agaggtggaagagatcgcagtttctccaggagtcgaagtcgcagtcgtagtcgtgagcgc
aatggtcgaggaggaggtcgtcggagctacagccgaagctactcccgcagtcgcagcccc
gtaaacaatcgcacagaagttattggaaagagttactggagcagcgaaagatga
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