Neodiprion lecontei (redheaded pine sawfly): 107222982
Help
Entry
107222982 CDS
T09006
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107222982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107222982
03036 Chromosome and associated proteins [BR:
nlo03036
]
107222982
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107222982
Coactivators
SAGA/TFTC/STAGA complex
107222982
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107222982
STAGA complex
107222982
TFTC complex
107222982
SAGA complex
107222982
SLIK complex
107222982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_like
Beta-prop_EIPR1
Ge1_WD40
RMC1_N
Beta-prop_DCAF12
Beta-prop_DCAF4
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Mala_s_1-like
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
107222982
NCBI-ProteinID:
XP_015518025
UniProt:
A0A6J0BU89
LinkDB
All DBs
Position
4:9195448..9208665
Genome browser
AA seq
588 aa
AA seq
DB search
MKRSKIDIINATVESYLKRRHYHQESDIFRKSERGDCQTSAAEMTLSTTVECSTSRENSI
VFSAITNDAGVADQAYHKLKIWIQTINNENLKIELQGVLYPIFCHLYLEMLHGGNRQTAI
QFLKMYQNDFVSDTERDFLEELSSVFSIQDIELRPLVNAFRTRKYKVDMSDDAHFCLQKF
LAKQGHVILMQVINTHVTIIRKIPEVHPDEDRSCERGPNRESVINGHVEQPSGTGVDREM
RELQEAIRLIRSNVHQPLRVYAINNANENASCGSITPNIDRLAAGFSTSEIRLWGISDTV
LTRPRLKAAPLNFASNNPSTSRSLWTDDHMDEAGAIVMRGHTDVVHDLKFIPEADVLLSV
SSDKDMRAWRLSDYSCAAIYNGHNYPVWCMDTSVFNLYIATGSHDRTAKLWSLDRTFPLR
IFAGHFLDVNCIRFHPNARYLATGSADKTIRLWSKDDGSLVRVYVGARSTIYSLAFSPDG
KYLAAAGDDKSVSIWDLATNTQLIELKGHQDTVMNLDWSSDGQYIASASIDGVVRLWSTQ
RHINTSNGDNTNSQSGQDNSQVYPTNCSSILSLQYYHKNDSLVCIGTS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtcgaaaattgacataatcaacgcgactgtcgaatcctacttaaaacggagg
cactatcatcaggagagtgacatttttcgtaaatctgaacgcggagattgtcaaaccagc
gccgccgaaatgactttaagcacgactgttgagtgcagtacttctcgtgagaattcaatc
gtctttagcgctattacaaacgacgctggagtcgctgatcaagcatatcacaaattgaaa
atatggatccaaacaataaacaatgaaaacttgaagattgaactgcaaggagtattatat
ccgatattctgtcatttatatctggagatgttgcatggcggtaacagacagacagctatt
cagtttttaaaaatgtaccaaaatgactttgtctctgatactgaacgagactttttagaa
gaactatctagcgtattttctattcaagatatagaactcaggccattggttaatgcgttc
agaacaagaaaatataaggtcgatatgtcagacgatgctcacttctgtcttcaaaagttt
ctcgccaaacagggacatgttattttaatgcaggtaataaatacacatgtgacaatcatc
agaaaaataccagaagtacatccagatgaagatagaagttgtgaacgtggaccgaataga
gaatcggtaattaacggtcatgtagagcaaccttcgggcacaggtgtagatcgtgaaatg
cgtgaactccaagaagctattcgattgattcgtagtaacgttcatcaaccattgagggtc
tatgcaattaataatgccaatgaaaacgctagctgcggttcaattacgccgaacatagac
aggctagcagccggatttagcacttctgaaataagactgtggggcatctcagatacggta
cttacaaggccaagacttaaagcagcgccgcttaattttgcatctaacaatccatccacc
agtagaagtttatggaccgatgaccatatggacgaagcaggggcaattgtgatgcgaggg
catacagacgtggtgcatgatttaaaattcattcccgaagctgatgttcttctatctgta
tctagtgacaaagatatgagagcatggcgactgagcgattattcctgtgcagctatatac
aacgggcataattatcctgtatggtgcatggataccagtgtatttaatttgtacatagca
actggttcgcacgatcgtactgccaaactttggtcgctagatcgaacttttccacttcgg
atatttgcgggtcactttctagacgttaattgcattagatttcatcccaatgcccgatat
ttagcaaccggttcagcagataaaacgataaggctatggagcaaagatgatggtagtttg
gttagagtttatgttggtgctcgttcaacaatttacagtcttgcttttagtccagatgga
aagtatttagccgctgccggtgacgacaaaagtgtatctatatgggatttagcaacgaat
acccagttgattgagttaaagggtcatcaggatacagtaatgaatttggattggagttct
gatggccagtatattgctagtgccagtatagatggagtagtgcgactttggtccacccaa
cgacacataaatactagtaatggggacaacacaaactcacaatctggacaagacaattct
caagtatatccaacaaattgctcaagtattctatcactacaatattaccacaagaatgac
tcacttgtttgtattggaacatcgtag
DBGET
integrated database retrieval system
