Neodiprion lecontei (redheaded pine sawfly): 107223058
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Entry
107223058 CDS
T09006
Name
(RefSeq) chondroitin sulfate synthase 1 isoform X3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
nlo01100
Metabolic pathways
Module
nlo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
107223058
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nlo01003
]
107223058
Enzymes [BR:
nlo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
107223058
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
107223058
Glycosyltransferases [BR:
nlo01003
]
Glycan extension
O-Glycan
107223058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
107223058
NCBI-ProteinID:
XP_015518115
UniProt:
A0A6J0BUJ0
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Position
6:24561264..24572763
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AA seq
832 aa
AA seq
DB search
MSIGEVTADPAMRKKRGPRSALLGLVLGFVGGFLVANFRLVIPLGKVRPSNDSFCPGAPS
RHHQRVTLDYRAKLEPMDIVKLPKEDNVSNSATNLLFVGVMTARKYLDTRAKAVFETWGS
ELPGKIAFFSSETSTAPDNCPDLPLVALPNVDDSYPPQKKSFLMLQYMWQHFGDKFEWFL
RADDDVYVRSDRLEKLLRSVDSRLPRYIGQAGRGNSEEFGLLSLEYDENFCMGGPGVVLS
RETLKRVVPHIRYCLKNLYTTHEDVELGRCVQKYAGIPCTWSYEMQSILYHNSSGDQAFT
GNLKRKEVHRAITLHPVKSPPYMYRLHNYMRGLRIQELQHLKVQLHRDIQSMMAELHVDR
EKIQEYSLSKNVPLFPEKPGSDQYLGDNKVLGVPAGLRAFRPKKTSEVIPWDFLSKSEYS
LTDANPRRRIHSDVKEGLEDITREVMASINACSRQRGRVVEERSILYGYRRVDAYGADTV
LDILLVYRKYRGRKVTLPVRRHVYVHQHFTGLEIREVVDGVEAESKTHRDREANSIQSVL
RNSFLSMNYNAKESLDPIESKVIHFILPLSGRLATFRRFISVYEDVCLVGKGERTELTII
LFPHRVEGSFNESTSLVNNLKYKYPSAVIAVVPSYKNFSRAVALEIGVSRHKDDDLLFFV
DVDIVFTSSALRRIRLNTIMNRQVYFPIVFSQFDPKIVYADGKLRENDLITNSNGYWREY
GFGIASLYKKDFRLVGGFDLSIQGWGKEDVDLFEKAVRSNLTTFRAVDPHLVHVFHDVEC
DPSLSGPQLTMCEGSRADTYAGLNQLADTIYSHPEYLRYAKALRTRTSTPAA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcggagaggtgacggctgacccggcaatgcgaaagaagcggggtccacggagc
gccctgctcggcctggttctgggcttcgtcggaggttttctcgtcgctaatttccggctg
gtgataccactgggcaaggtccgaccctcgaacgactcgttctgccccggagcaccgagt
cgccatcatcaacgcgtcaccttggattaccgggcgaagctggaaccgatggacattgtg
aaactcccgaaggaggacaacgtcagtaacagtgcaacgaatctgctcttcgtcggggtg
atgaccgcccggaagtacctcgacaccagagccaaggcggttttcgaaacctggggatcg
gagctgcccggtaaaatcgccttcttttcatcggagacctcgaccgctccggacaactgc
cccgaccttccactcgtcgcgcttcccaacgtcgacgacagctatcctccccagaagaag
tccttcctgatgctgcagtacatgtggcagcacttcggcgacaagttcgagtggttccta
agggccgacgacgacgtctacgtcaggtccgatcgcctcgagaagctgctcaggtccgta
gactcgagactaccaaggtacatcggacaggcgggaagagggaactccgaagagttcgga
ctcctctccctcgagtacgatgaaaacttctgcatgggcgggccgggagtcgttctctcc
agggaaaccctgaagcgagtcgttccgcacatcagatattgcctcaaaaatctgtacacc
acccacgaggacgtcgaacttggaaggtgcgtccagaagtacgccggcattccgtgcacc
tggagctacgagatgcagtctattctctatcacaacagtagcggggatcaagccttcacc
ggtaatctgaaacgcaaagaggttcacagagcgattactctacatccggtaaaaagtccg
ccgtacatgtacagacttcacaattatatgaggggtctacgtatacaagaactgcaacac
ctgaaggttcagctgcacagagacatacagtcgatgatggcggagcttcacgtggatcgt
gagaaaatccaggaatacagtttatcaaaaaacgttcctctgtttcctgaaaaaccaggt
agcgatcagtacctcggggacaacaaggtcctgggtgttccagctggactacgggcgttt
aggccgaagaaaacgagcgaggtgattccgtgggacttcctctcgaagtccgagtacagt
ctgactgatgccaatcctcggcgaagaatccacagcgacgtcaaggagggcctggaggac
ataaccagggaggtgatggcctccataaacgcctgctcgaggcagaggggccgagttgta
gaggaacgctcgattctctacgggtacaggagagtcgacgcttatggcgcggatacggtt
ctcgatattctacttgtataccgcaagtaccgtggaagaaaagtaacgcttccggttcgc
agacacgtctacgtccaccagcactttacaggtttggaaatacgagaggtggtcgacgga
gttgaagctgaatcgaagacgcaccgtgaccgggaagcgaactccatccagagcgtcttg
cggaatagttttttgagtatgaactacaatgcgaaagaaagcttggaccccatcgagagt
aaagtgatccatttcattctcccgctgtccggacgcctcgcgacgtttcggaggtttatc
agtgtttacgaagacgtttgtttggtgggtaaaggcgaaaggacggaactgacgataatc
ctgttcccgcacagggttgaagggtccttcaacgagtctacatctctagttaataaccta
aaatataagtatccgagtgcagtgatcgccgtcgttccatcgtacaaaaacttttcgaga
gcagtagctctggagatcggtgtatccaggcacaaggacgacgatctcctgttcttcgtc
gacgtggacatcgtcttcacgagttcagcccttcgcagaatacggctgaacacgattatg
aacagacaagtgtactttccgatagtattcagccaattcgatcctaagattgtctacgct
gacggtaaactccgggagaacgatctgatcacaaattcgaacggctactggcgagaatac
ggcttcggcatagcgtccctttacaaaaaggatttccggctcgtcggtggtttcgaccta
tcgattcaagggtggggaaaggaggacgtcgatcttttcgagaaggcggttcgctcgaac
ctgacgaccttcagggccgttgatccgcacctcgtccatgtcttccacgacgtcgaatgt
gatcctagcctctcgggacctcagcttacgatgtgcgaaggatccagagccgacacttac
gccgggttgaatcaactggccgatacgatttacagccatcctgaatacttgagatacgca
aaggcattgcgcacccggacgagcactccggctgcctga
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