Neodiprion lecontei (redheaded pine sawfly): 107223404
Help
Entry
107223404 CDS
T09006
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlo03016
]
107223404
Transfer RNA biogenesis [BR:
nlo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107223404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
RMC1_N
Motif
Other DBs
NCBI-GeneID:
107223404
NCBI-ProteinID:
XP_015518565
UniProt:
A0A6J0BVU1
LinkDB
All DBs
Position
6:20626741..20632361
Genome browser
AA seq
1350 aa
AA seq
DB search
MKNLRVLQQSYIELKNLEASLDSEVLTSLTAESLCCLDNDGGGFYVYKNNNVYHIATGIF
EYFHVGNENVVDSKLVGFAFCDSTRQIYLAYSCGRLFTIEIDLPDPQAEFSAQINEGLCA
IKLSPDHEIITLVTANDTVIIMTSGFHVITEFDLNSATFGEKQFVTVGWGKKETQFHGSE
GKSAAKAKPSSIEKSDSDDGLPRVSWRGDSMLFAVSFLTKETNIRLFKVFSREGVLQYTS
EPSSGLEENLAWKPSGNLIAITQRFPNKHVVSFFEKNGLKHREFTLPFEPKEIMVKDLQW
STDLDILAIWCLNINDGSTRVQLWTENNYHWYLKQTILFSKNNPLLHISWSTVSGCEKKL
LVLTKLKYLVYTFCWTVSHSRGTNQTDKALVGVIDGDRALLTGFRDAVVPPPMAHQALQI
DEPINEVVFAPEIQNKDSWMNSNVLFILLENNQLAFYKQVPNLVEYGHIKTYKIEWEIPN
PIPESVPYSMHHYLWYKEDTILCTAPLGLNSVLCIIDIDGINPEKNGRLVVRDVHTVTGA
IQHIVSSPDPDLVYIVAEGSILTYSRGKGVNPTGITLSESCHQVEVIQVDDKHIVLCLSE
KYCLFVDGKEIANNITSFFVHTEFLLLTTLQHVLVSIALDGNGFQKLLTHDLTVEPREGT
DNEKMVSGLSLRRVERGSKLIMAVPKDTRTILQMPRGNLECIQPRALSLYVIGTYLNELN
YHAAFDLIRKQRINLNLIFDHDPDLFIANTEKFIEDIKNPNWLSLFLSELQEEDVTSTMY
SSCYSRKAKQNHILNQVPSSTDKLIISSGKCEENSPSKNKVEHVCELLRNHMEARLDADR
LLLPILTSLVKKHEVKDLEAALVKVKAIKKLESQSEAKLHSSSEEALKYLLYLVDVNTLF
DIALGMYDFDLVMLVAAKSQKDPKEYVPFLNDLRQLDDDYMRFSIDVHLKRYESALNNIS
KCKDRFDECKILIKTQNLHSKALKLFKSNSKEYKEIAEIYGEYLIASRKFQEAAIMFTRS
NNLVKALNAFKLAGDWREAIVIAQEMKLSVTDLQCLYQDLVRQLKDTRKYADAAIILMHY
LHEPEDTVATLCEGKLWHEALRIAYQVERLDIIETHIKPGVQEHADYMISKIIKNQTDFI
KFRERLSIVRAEKSLKELQLRDVGDGDHEFNPMMGDSDLFSDTSSIAGSMTSRGSQSSRL
SGKSYRSSKNRRKHERKLHSLREGSIYEDLALISALHGIVTTTYADRAEINSLMRILLRF
YNDGCAEKLQNSMEELLNQIERGKLEIWSDYLHNGSTDSALGTNFESSQPGQGDVPEPSL
EPHLRYPPVANPSIWQLEVISSKPKSISNT
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttgagagtgttgcaacaaagttacatagaactcaaaaatttggaagctagt
ctcgattccgaagtcctaacatcattaacagcagagagtctttgctgtctcgataacgac
ggtggtggtttttatgtgtacaaaaacaacaacgtttaccatatcgccactggcatattc
gaatattttcacgttggaaatgaaaatgttgtcgattcaaagctcgtgggcttcgctttt
tgtgacagtacgcgacagatttatctggcctattcttgtggaagacttttcaccatcgag
atcgatctcccagatccacaggcggaattttctgcgcaaatcaacgaaggcttgtgtgcc
ataaaattaagccctgatcacgaaattatcacacttgtcacggcaaatgataccgttatt
ataatgacatctggctttcatgtaattactgagtttgacttaaattcggccacatttgga
gagaaacaattcgtgaccgtcgggtggggcaaaaaagagactcagtttcatggttcggaa
ggaaaatctgctgccaaagctaagccatcgtccatagaaaagtccgactcagacgatgga
ctacctcgagtttcttggcgaggagacagcatgctctttgccgttagttttcttacaaag
gaaacaaacattcgattattcaaagtgtttagcagggaaggagtcctccaatatacaagc
gagcctagctcaggactagaagaaaatttggcgtggaaaccatctggaaatttgatcgca
atcacacagaggtttcctaacaagcacgttgtatcattctttgaaaaaaatggtctgaaa
cacagagagttcactttaccatttgagcccaaagaaattatggtaaaggatttgcaatgg
tccacggatttagatatcctagcaatttggtgcctaaatataaatgacggtagtacgcgc
gttcagttgtggactgaaaacaattaccactggtacttgaagcagactatattgttctcg
aagaataatccactcttgcatatatcttggagtacagtatctggatgtgaaaaaaaactg
ctcgttttaacaaagctaaaatatttagtctacactttttgttggactgttagccacagt
cgaggcacaaaccaaactgataaagcccttgtcggagttatcgatggcgatcgagcactt
ctgacaggttttagagacgctgttgtgccgccacctatggctcaccaggctctacaaatt
gacgagcccattaacgaagttgtttttgcacctgaaattcaaaataaggatagctggatg
aactcaaacgttttattcatactgttagaaaataatcagttggcattttataaacaggta
ccaaaccttgtggaatatggccatatcaaaacttacaaaatcgaatgggaaatacctaat
ccgattccagaatcagtgccatattctatgcatcactatttgtggtataaagaagataca
attttgtgcacagcaccactagggctcaattctgtactctgcattattgatatagatggt
atcaatcctgaaaagaatggtcgtcttgttgtgcgagacgtccacacagttacaggtgct
attcaacacattgtttccagtcctgatccagacctagtttacattgttgccgagggttct
atattaacatacagcagaggcaaaggcgttaacccaacagggataactcttagtgaatct
tgccatcaagtggaggtgatccaagttgatgacaaacatattgttttatgcctcagcgag
aagtactgtttatttgttgatggcaaagaaattgctaacaatataaccagcttctttgtg
catacggaatttttgttattaaccacactccaacatgttttggtaagcattgcgctggat
ggcaatggattccagaagttattaacacatgatctgactgttgaaccaagagaaggtaca
gataacgaaaaaatggtctcaggtttgagtctgaggcgtgtagaacgaggatcaaaattg
ataatggctgtaccaaaagataccagaactattttgcaaatgcctcgtggaaatttagag
tgtattcaacccagagctctatctctatacgttattggtacatatttgaatgagttgaat
taccatgctgcttttgatttgatccggaaacagaggattaatttgaatttgatatttgat
catgatccagatttgtttattgcaaatactgaaaagtttattgaggatataaaaaatcca
aactggttgagcctgtttctatcagaattgcaagaagaagatgttacctctacaatgtac
tcgagttgttactcccgcaaagcaaaacagaaccacatattgaatcaagtacctagttct
acagataagctgataatttcttctggcaaatgtgaagaaaattcgccaagtaaaaataag
gtcgaacacgtttgtgaacttctgagaaatcatatggaggcaagacttgatgcagacaga
ttgctgctaccgattcttactagcttggtaaaaaaacacgaggtcaaagatttggaagca
gctctagtgaaagtgaaggcgattaaaaagttggaaagtcaatctgaagcaaagctgcac
agttcatcggaagaagcgttgaaatatttgctgtacttagttgacgttaacacattgttt
gatattgcccttggaatgtatgatttcgacttggtgatgctcgtcgcagcaaaatctcaa
aaagaccctaaggaatacgtcccgtttctaaatgatttacgacaattggatgacgattac
atgcggttttctatcgacgtacacttgaaacgttatgaaagtgctttgaataatatctca
aagtgtaaagatcgttttgatgaatgtaaaattttgattaaaacgcaaaatttacattcc
aaagcattgaaattgtttaaatcaaacagcaaagagtacaaagaaatcgctgaaatttac
ggagaatatctcatcgcgtcgagaaaatttcaagaagcagctattatgtttactcggagt
aataatctcgttaaagctttgaatgcttttaagttggctggggattggcgtgaagctatc
gtcattgcacaggaaatgaagttgagtgttacagatttgcagtgtttatatcaggattta
gtaaggcagttgaaagataccagaaaatatgctgatgctgccattattttaatgcactat
ttgcacgaacccgaagacactgttgctactttgtgcgaaggcaagctgtggcacgaagca
ttgaggatcgcttatcaagtagagcgcctggatataattgaaactcacataaagcctggt
gttcaagagcatgctgactacatgatttcaaaaattattaaaaatcaaacagattttatc
aagttcagagagcgattgagcattgttagagccgaaaagtcactgaaagaattgcaacta
agagatgttggtgatggagatcacgagttcaacccgatgatgggagactctgatttgttt
agtgacacaagtagcattgctggatcaatgacaagccgtgggtctcagtcttctagacta
tctggaaaaagttatcgatctagtaaaaacaggagaaaacatgaacgaaaacttcacagt
ttgcgtgaaggcagtatatacgaagatttagctctaataagtgcattgcatggaatcgta
acaacaacttacgcagacagagcggagattaactcactcatgaggatattgctgcgattc
tataacgatggttgtgcagaaaagttgcaaaattcgatggaagaattattgaatcaaatt
gaaagaggaaaactggaaatctggtctgattacctgcataatggttctacagattctgca
ctgggtacaaatttcgaaagttctcaacctggacaaggagacgtacctgagccgtctttg
gaaccgcatttgcggtatccacctgtagcaaatcccagtatctggcaactcgaagtgata
tcatcaaagccaaagtcaatatcaaacacttaa
DBGET
integrated database retrieval system
