Neodiprion lecontei (redheaded pine sawfly): 107223604
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Entry
107223604 CDS
T09006
Name
(RefSeq) nuclear factor of activated T-cells 5 isoform X1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
107223604
NCBI-ProteinID:
XP_046597753
EnsemblRapid:
ENSNLCG00000010507
ENSNLCG00000011040
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All DBs
Position
5:complement(18850471..18915709)
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AA seq
1343 aa
AA seq
DB search
MAPDLGGKRSPGRAITAAHCSAGGMLLLQHRRSAVGHSLDGYLHAGSAGGLSSTATGTSA
RGTVAPTARTYSSRRINHPRQSAQPKVLLASARPNSGIRGSDELAARLISAQDACDNSND
SGLGFEERQQQQQQQQQLSNAGWSAGEEDSKRRRMDIKLESEDANFAFPEVQARGRNETK
TAARGNTNGIGGASIPRDSTSRDGKTQLQIICQPEQQHRARYQTEGSRGAVKDRTGNGFP
IVRLVGYDKPTTLQVFIGTDLGRVAPHMFYQACRVSGKNSTPCVERKVDGTIVIEVDMDP
AKEMLVTCDCVGILKERNVDVEHRFPQEAGILQGRSKKKSTRCRMVFRTTISHPNGTTET
LQICSQPIVCTQPPGIPEISKKSLTSCPCTGGLELFVLGKNFLKDTRIVFHLDDEDMSSS
MEPHWECAVLPDKEFLQQTHLVCVVPPYRRQDLEPNESISVKLYAVSSGKTSEPHAFLYT
AASAAPEPSVGKIESVLPVLTTTSAEATLTSSTEVVSLTSVSTSSLLSPVVTSTSSFASA
MEQQPSQPHSEPQQVQQQQQQQQKQPQQQQQQQQQQQEVLKSESCQSPPSSSSPVTPVMM
WTTQSQSSCTNVMMPPPPMIASPILSIHSSSDLQLILPDNLKTEILDESSQSSMISENSM
QGLPSSTATSQQAASCPLQISGEGSREAPASLLSVVSANVSAAVSPSEETAVNLLGVADM
IRNQHPLALSPQDPFSVMQDSPQVKVLSPRHINKESTGLLSSGDGDGSSSGRVQGAGVVD
LRMKQQQQQQRDFSTLTTFAATAPDQSLPAQSGHSIEKYLNHIETSPSQNKEPERGGAGG
DFVASVQQRGSIISTGRQQQQQVSQPPNILAPTHATKKLDALVNSAAETHQLGSPVPASE
ISTVNLIGHVSPDAEAIHRQQQHDVMSGSPQPRNSPPIPVKAMILEALMPAPTISGQPMT
PVSVAVPANNGAPEKLPEENLLTTIATALLPPMQEPPINTAADTAASPTCVTTIHRPLEV
PSEPIPSAAEQIQQMQVLAQQEVAAMQQVQQVEQVMAQAQQQVEQVVAHAHQQAVQAVQQ
AQQQVVQQVVQHAQVVQHAVQQVQAVQQVQAVPAVQQAVQQATQEAVQQAVQQATQEVVQ
QVQAVQQAVQQAQAAQAMQHAVQQDIGSMLSQPAGFVAEASSALASGAAQEPSQQRLTTA
AEQAINSVITNATQDIINNRPITTTTAHAIIATKNILNSVATQSAQLMNTAMEGILPKSP
TGQGAMVEQVTNKATLPVGNSSQGVSVPVTASGPVNPSNAGPPARKPEDAGGMLPQELTS
MSEHDLLSYINPSCFDPQGGFLM
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgatttaggcggcaaacgatcgccaggcagagcgattactgctgctcattgc
agtgccggagggatgctacttttgcagcacagacgatccgcggtgggacactcactcgac
ggctatctgcatgctggaagtgctgggggtctgtcatcaactgcgactgggacttccgcg
agaggaacggtagcgccaacggctagaacatattcctcgaggaggatcaaccaccctcgt
caaagtgcgcagcccaaggtgctgcttgcctcggcgaggccaaactctggtatccggggt
tccgatgaactcgcggcgagactgataagcgcccaggacgcctgtgacaattctaacgac
tcgggcctcggcttcgaagagcggcagcagcagcagcagcagcagcagcagctctccaac
gccggctggagcgctggcgaggaggattcgaagcggcgcagaatggacataaagctggaa
tcggaggacgccaactttgcgttcccggaagttcaggcacgcggccgaaacgagacgaag
accgctgcaaggggcaatacaaatggtattggaggtgcttctattcccagagatagtacg
tcaagagacggaaagacgcaactgcagataatctgtcagccggagcagcagcatagagct
agataccaaacagagggttcacgaggcgctgtgaaggatcggacaggaaatggattccca
atagtgcgtctggtcggttacgacaagccaacgaccctccaggtcttcattggcacagac
ctgggtcgagttgctccacacatgttttaccaggcatgcagagtgagtggaaaaaactcg
accccttgcgttgagcgcaaggtggatggtacgattgtcattgaggtggacatggatccg
gcaaaagaaatgctggtcacctgtgactgcgtcggcattctgaaagagcgaaatgttgat
gtcgagcataggtttccccaggaagctggcattcttcaggggcgcagcaaaaagaaatct
accaggtgtcgcatggtgtttcgcactactatttcgcaccctaacggcaccactgaaact
ctacaaatttgctcacagcccatcgtttgcactcaaccgccaggcataccagaaatcagc
aaaaaatctctcacgtcatgtccatgcaccggtgggctggagctgttcgtgctgggaaag
aacttcctgaaggatacacgaatcgtgtttcacctggacgacgaagatatgtcgagcagc
atggagccacactgggaatgcgccgtgcttcctgacaaggaatttctgcagcagacgcat
ctggtctgcgtggttccgccatacagacgccaagatctcgaacccaacgagtcgattagt
gtgaaactctacgcagtttcatcggggaagactagcgagcctcatgcttttctttatacc
gctgcctctgccgctcctgaaccatctgttggaaaaatagaatctgttttacccgttttg
accactacttcagccgaagccactctgacttcgtccacagaggttgtttctctgacaagc
gtttctacgagctcgctactttcgccagtggtgacaagcacgtcaagtttcgcatcggcc
atggaacagcagccgtcgcagcctcactccgagccgcaacaagtgcaacaacaacaacaa
caacaacaaaaacaaccacaacaacaacagcagcagcagcagcagcagcaagaagtattg
aagagcgagagctgccagtcacctccatcatcgagttcgccagtaacgcctgtaatgatg
tggaccacacagtcccagagttcgtgcacaaatgtaatgatgccaccacctccgatgatt
gcaagcccaatactaagcattcactcgtcttccgatctccaactgatactccccgataac
ctgaaaaccgagatcctcgacgaaagcagtcaaagcagtatgattagcgaaaacagcatg
cagggactgccgagcagcacagcaaccagccagcaagcagcgtcctgtcccctgcaaata
agtggcgaaggctcgagggaggctccagcatcacttctgtctgtcgttagcgctaatgtc
tcagcagctgtgagtccctctgaggagacagcagttaatctgctcggggtcgcagacatg
attcgaaatcaacatccgctcgccctctctccgcaagatcccttcagcgttatgcaagac
tctcctcaagtgaaggtcctcagtccacgacacatcaataaagaatcgacggggcttttg
tcctccggagacggagacggaagctccagtggacgggtccagggtgcaggtgtcgtcgat
ctacgaatgaaacaacaacaacagcagcaacgggatttctccaccctgacgacgtttgct
gcaactgctcctgatcaaagtcttcctgcgcaaagcggacacagcattgagaagtatctg
aaccacattgagacttccccgtcacagaacaaggagccagagagaggcggagcaggaggc
gattttgtggctagcgtccagcagcgagggtcgattatatcgaccggcaggcaacagcag
cagcaggtttcgcaacctccaaatatccttgctccgacacacgcgactaagaaattagat
gctttggtcaattctgcagctgaaacgcaccagcttggttcaccagttccagcctctgaa
atctcgacggtgaatctgatagggcatgtttctccggacgccgaggcgatccatcgacag
cagcagcacgacgttatgtctggatctccgcagccaagaaacagtccgcctattcctgtt
aaggcgatgatactcgaggcactcatgcccgcgccaactatctctggacagcccatgaca
cctgtcagcgtcgctgttcctgcaaataatggagcacctgagaaattgcctgaggaaaat
cttctaacgactattgccactgcgcttctgcctcccatgcaggaaccaccgatcaatact
gctgctgataccgccgcttcgcctacctgcgttaccaccattcatcgtccgctggaggta
ccaagcgagccgattccctcagcagctgaacagatccagcagatgcaggttcttgcacag
caggaagtggctgcaatgcagcaagtccaacaggttgagcaagtgatggcacaggctcag
cagcaagttgagcaggttgtggcccatgcacatcagcaggcagttcaggcagttcagcag
gcgcaacagcaagtggtccagcaggttgtccagcacgcgcaggtggtccagcacgcggtc
cagcaggtccaggcagtccagcaggtacaggcggttccagcggtgcagcaggcggtccaa
caggctacgcaggaggctgttcaacaggcggttcagcaggcgacccaagaagtggtccag
caagtccaggcggttcagcaagcggtgcagcaggcacaggcagcacaggcaatgcagcat
gcggttcagcaagacataggatcgatgctgagccagccggcaggttttgttgccgaagcg
agttcggccctggccagtggagcagcgcaggagccaagccagcagaggctgacaacagct
gccgagcaggcgataaattcagtgataacaaacgcgacacaggacataataaacaatcgt
ccaataactacgacgacagcgcacgcgatcattgccacaaagaatattctcaacagtgtt
gcgacgcagagcgcacagctaatgaacaccgccatggaggggattctgccgaagtctccg
actggacagggtgccatggtcgagcaagttaccaacaaggcgacattgccagtgggcaat
tctagccaaggtgtcagtgtgcctgtaactgccagcgggcctgttaatcccagcaacgct
ggaccacctgccaggaaacctgaagatgctgggggcatgttgccacaggaattaacttct
atgtctgagcatgaccttctcagctatatcaatcccagctgttttgatccccaaggagga
tttctcatgtag
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