Neodiprion lecontei (redheaded pine sawfly): 107223789
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Entry
107223789 CDS
T09006
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nlo04121
]
107223789
Enzymes [BR:
nlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107223789
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107223789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8
zf-RING_16
Hemotin
zf_RING_Vps8_fungal
EphA2_TM
PHD
PHDvar_NSD
zf-C3H2C3
zf-RING_Vps41
zf-RING_4
Cadherin_C_2
LapA_dom
RINGv
Motif
Other DBs
NCBI-GeneID:
107223789
NCBI-ProteinID:
XP_015519077
UniProt:
A0A6J0BY68
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All DBs
Position
2:complement(232666..241743)
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AA seq
449 aa
AA seq
DB search
MPRCCLSHRVQLWLAILTICVAYAGADILVFSTTAKHQITEFRDAPARFGGLIPVEGIKG
MVVYADPPTACNPIAEPPNIPNYYGKWIVLIARFNCTFEEKIRMAQAANYDAAIIHNIGS
NEIEQMSAENPSGIGIPSVFVGEDTGAYLRSEYLYDQYFILINDDLPFNINTRLLLPFAI
VVGICFLVMVIFMVIKCIKDRRRQRRHRLPNSSLKKIPTHKYTKGDPYETCAICLEDYAE
GEKLRVLPCAHAYHTKCIDPWLTKNRRVCPVCKRKVFATDERVTDSESDTDVDDSTPLIR
DGHQGTQGGTFTPQRDNPFTRASRNLNRSGSTSSNSSLNSERQLVSADDEENGNNGESSR
SKLFVVSDSHSINGEPPELERSASSTKPHTVNLDTQDVHPVIQIVPARNPRILVNPVAPN
SGHPIMVPTNPLPIPTILSEEHERNDYHA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctgttgccttagccacagagttcaattatggcttgccatattaacgatatgc
gtcgcatatgctggtgccgatatcctagtgttttcaacgacagctaagcatcagataact
gaatttcgtgatgctccggcaagatttggtggcctcataccggtagaaggaataaaggga
atggttgtgtatgcagacccgccaacagcctgcaatccaattgccgagccaccaaatatt
ccaaattattatggaaagtggattgtattgatagcccgttttaattgtacctttgaagaa
aaaatccgtatggcacaagctgctaattatgatgcagcgatcatacacaacataggtagc
aacgaaattgaacagatgtcagcggaaaatccaagcggcattgggattccctctgtattt
gtcggcgaggataccggcgcttatcttcgaagcgaatatctgtacgatcagtacttcatc
ctgattaatgatgatttaccttttaacatcaacacccgccttttgctaccctttgccatt
gtcgtcggaatatgttttctagtcatggtcatatttatggtaattaaatgcatcaaggac
agaagacggcaacgcaggcacaggctacctaattcaagcttgaagaaaatccccacccac
aagtatactaagggagatccgtacgagacgtgtgccatttgtttggaagattatgccgaa
ggtgaaaaactgagggtcttaccatgcgcccacgcttatcacacgaaatgcatagatccg
tggctgacgaaaaatagacgcgtctgtccagtttgcaagcgtaaggtatttgcgacggat
gaacgcgtcaccgacagtgaaagtgacacggacgtcgatgattctacaccactgatccgc
gacgggcatcaaggtacgcaaggcggcacctttacgccacaacgggataatccttttaca
agagcctcccgaaatctgaacaggagtgggtcgactagttcgaacagcagtttgaactct
gagaggcagttggtcagtgctgacgacgaagagaacggtaacaatggtgaatcttccaga
agtaaactgtttgtggtctcggacagccatagtataaatggcgaaccaccggagctcgaa
cgatcggcaagcagtacgaagccccacacagtaaatttagacactcaagatgtccatccc
gtcatacaaattgtgcctgcgagaaatcccagaattttagttaacccagtcgcaccgaat
tcgggccatccgataatggtaccgacaaatccattgcccataccgacaattctttcggag
gagcatgagaggaatgattaccatgcgtag
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