Neodiprion lecontei (redheaded pine sawfly): 107223969
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Entry
107223969 CDS
T09006
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nlo03009
]
107223969
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
90S particles
Other 90S particles
107223969
Pre-60S particles
Other pre-60S particles
107223969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
DUF4277
CCDC117
Motif
Other DBs
NCBI-GeneID:
107223969
NCBI-ProteinID:
XP_015519343
UniProt:
A0A6J0BYX4
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Position
2:12314230..12323909
Genome browser
AA seq
1307 aa
AA seq
DB search
MGKIKPRLGSRKKAKRWPKGQSSSSNPETKQHRDQARTRFFQENFGPGGLTSDALHKHDA
IQGTHQNVQNIEIDDDDETQATTIKTFNTFASDWSSCSNISFSRFLSGFQASSAMHKEML
AVLAAVTEVIKQNGGTESSTEYYAALMTTLEATETEESVAAVLSLLGMGLKTVPISVLRL
QFSQASQTFLQVLEKYATSENFLIQRTCIGCLSILLRSQEAAVWSSSSTVRILDAILVFT
VHSKPKLRKAAQHAVCSILKGSHIMKNDNPPAYHPAASQVAKHCLVQLEMASQPGGITAT
LHVLTMLKEIMHQLPKSHVKVICEELLKIMTMNNLLFTSCCLQAFHSLFISKPLETTLPP
TLNAQIINALYDYQPAPGDTQPTLAWLAVMQEAHCNLVQNSLQLCAANLPRILEKCTELW
LSDRSEVLSGASHTIKTLLQDCVAPLCKYEEGEKKYKTAISKSIHIIQQGMKYQYHSAWH
HVLHLLAIIFQIAGKTCQDQLLEILVALAELRDSYKFSYNSEVEYAVGAAVQSMGPEIVL
NTIPLQTSTDTIDLNRSWLLPTLKENIVQAPLSYFVKSLLPLATMCEQKSVALKSMNDGI
GSHSYQLLTSQIWALLPNFCNNPGDTKDSFKSIARILGIAISERKDLRLSVMASIRKLIT
RATDDGNKGDIEELAKFAKNFLPLLFNLYTSKPNGSDEEGQRLAALETIKIYLTISSKEL
AAELFDRALERMQSSDTDRFVKESILDLIRVLACHTDGARLLAVYKEFVPVLTDTKNPKE
QKKAYRFLEEICSSEKEACKEFIQQNRHGIQKMLLKSLSSTVASSKGARLRCLEHLVKSQ
PQLDQTKLLRSIVPEAVLCLKEVNERCRASAYQLLNTIAEQLLQTTKNLEKYIEMLVAGL
AGTPTLCSATLLALASVTYNYNGALGLETVKEIVKHACVLLTSPTREIALSAISYIKVYL
TIMPSPTVAPMLPTIVTALSDMTDDCQRHFRQKFRDVLVKLIRKYGADLIMGLVKPTATV
MLKRIKNLKKIQARKQKMKDQKKSETGSKDGVDDEEFNVKARPKTVEEILADSDDDFVDT
ETDEGVRGRKQKLKKKAWIHESEENIVDFVDAGAAKNITATQPGALDSTQSIRKKKEGGF
KTDEKGRLIIKDDDSDGEMEIKPKKLPFLGSDSENNSDDEDTKSTVSAAKTGRKRRLSGS
LDGISMRSDRPASKYQAGGSGIHRQITKNTPKNNPGSEYSAQKARGDIKKKGKPDPYAYV
PLTRSALNKRKKMKNAGRFKNIISGAKKGANVGRKNRDKPRKGVGRK
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaataaagccaagattgggtagccgtaaaaaagccaaaagatggcctaaggga
caaagttccagttcaaatcctgaaaccaaacaacaccgggatcaagcgcgaaccagattc
tttcaagaaaattttggtcctggcggtctaacctcagatgctcttcataagcatgatgct
atacaaggcacacatcaaaatgtacaaaatattgaaattgatgacgatgatgagacgcaa
gcaacaactattaaaactttcaacacatttgccagcgattggagtagctgttcgaacatt
tctttcagcagattcttgagtgggtttcaagctagttcagccatgcataaggaaatgttg
gcagttttagctgcagtcaccgaggtcataaaacaaaacggaggaaccgaatcttctact
gaatattacgcagcattgatgacaacactagaagcaacagagactgaggaatcagtggca
gccgtattatcactgttgggaatgggtttgaagacagttccaataagtgtccttagactg
cagtttagccaagctagccaaacctttcttcaagtattggagaagtatgcgactagcgag
aattttctgatccagcgaacatgcattggatgtctttccatattattgagatctcaggaa
gccgcagtttggtcaagttcgtcaaccgtgcgaatacttgacgcaatactagtgtttaca
gttcactccaaaccaaaattgcgaaaggctgctcaacatgcagtatgttcaatcctcaaa
ggaagccatataatgaagaacgacaatccacctgcatatcatcctgctgcgtctcaagtt
gcaaaacattgtctggttcagctggaaatggccagtcaaccaggtggaattacagcaact
ctgcatgtcctgactatgctgaaagaaatcatgcatcagctccccaaatcccacgttaag
gttatttgtgaagaactgctcaaaataatgacgatgaataatttgctcttcacttcttgc
tgtctacaagccttccacagtttgtttatatcgaaacctttggaaacaacattaccacct
accttaaatgctcagatcatcaatgctctgtacgattatcagccagcgcctggagacaca
cagccgactttagcgtggcttgccgtaatgcaagaagcacattgcaacctcgttcaaaat
tcattgcaactatgtgcagcaaatttacccagaattttggaaaagtgtacagaactttgg
ttgtctgataggtctgaagtattgagtggtgcatcacacactattaaaacacttttacaa
gattgcgttgcgcctttgtgcaaatacgaagaaggtgaaaaaaagtacaagactgcgata
tctaaatcaattcatataattcagcaaggaatgaagtaccaatatcactctgcgtggcat
cacgttctccacttgcttgccattattttccagattgcaggcaaaacctgtcaggatcaa
ttgttggaaatattagtcgcgctcgcagaactgagggattcgtataaattttcatacaat
tccgaagtcgagtatgccgttggagctgctgttcagtccatgggtcctgaaattgttctg
aacacaattccgctacagacttccacagataccatagatttgaacagaagttggctcttg
ccaacgctgaaggagaacatcgttcaagccccactttcctattttgtgaagtcattacta
ccgctggctacaatgtgcgagcagaaatcagttgctctgaagtccatgaatgatggaatt
ggctctcacagttatcagctgttgacatcgcagatttgggctttgcttccaaatttctgc
aacaacccaggtgatacgaaagacagtttcaagagcattgctagaatcttgggaattgct
ataagtgagcgaaaagatctgaggttatcagttatggcatcgatacgaaaacttataacc
agagcaactgatgatggcaacaaaggagacattgaggagttggcaaaattcgccaaaaac
tttcttcctttgctattcaacctttatacaagtaaaccaaacggttctgacgaagaaggt
caacgtcttgcagcactagaaactatcaagatatatttgacaataagtagtaaagaatta
gcagctgaacttttcgatcgcgcattggaacggatgcagtcttctgatactgatcgcttc
gtaaaagagagtatattggatttaatcagggtattggcttgccatacagatggtgccaga
ctcctggctgtttacaaagagttcgttcctgtacttacagatactaagaacccaaaggaa
cagaaaaaagcgtacagatttttagaagaaatatgtagcagcgaaaaagaggcctgtaaa
gagttcatccaacagaacagacacggcattcaaaaaatgctcctgaaatctctgtcttct
actgtcgcaagcagcaaaggggctcgtcttcgatgtttggaacatcttgttaaatcccaa
cctcaattggatcagacaaaacttctgagatccatagtacctgaagctgtgctgtgcctc
aaggaagtgaacgaaagatgtcgagcatctgcgtaccagctgctaaacactattgctgag
cagctacttcaaacgacaaaaaatcttgagaagtacatcgaaatgttggtcgcaggtctt
gctggcactccaacactctgcagtgcaactttgctcgcactggcctccgtaacttacaat
tacaatggcgcactgggattggagaccgtcaaagagatagtgaaacatgcttgcgtttta
ttgacttcgccaaccagggaaattgcactatccgccatttcctacatcaaggtgtatctc
actatcatgccctcgccaacggttgcaccaatgttgcccacaatcgtgacggctctatcc
gatatgactgatgattgtcagagacattttcgtcaaaaatttcgtgacgtgcttgttaaa
ttgataaggaagtatggagctgatctgataatgggattggtcaaaccaacggccacagtc
atgctcaagagaattaaaaatttgaaaaagatacaagcaaggaagcaaaagatgaaagat
caaaaaaaatcagaaaccggaagtaaagatggtgtggatgatgaggaattcaatgtcaaa
gccaggccgaaaactgttgaagaaattctggcagatagcgatgacgattttgtagataca
gagacagatgagggagttcgaggtcgaaaacagaagctaaagaaaaaggcatggattcac
gaaagcgaggagaatattgtcgacttcgtggatgctggtgctgctaaaaatattactgca
acgcaacctggagctttggactccactcagtcgattagaaaaaagaaagagggtggtttt
aaaacggatgaaaaaggtcgtttgatcatcaaagatgatgacagcgatggcgaaatggag
ataaaaccgaaaaagttaccctttctgggtagtgattctgaaaacaacagtgatgacgaa
gacacgaaatctactgtatcagcagcgaagactggtcgaaaacggagacttagcggtagt
ttggacggtataagtatgcgatcggatcgccctgcgtcaaaatatcaagctggtggatca
ggtatccataggcagattactaaaaatacaccgaaaaataatcccggcagtgagtattct
gcccaaaaagcaaggggtgacatcaaaaagaagggaaaaccagatccttacgcttacgtg
cctttaacccgttcggcactgaataaacgtaagaagatgaaaaatgccggaagatttaag
aacatcatatcaggtgctaagaaaggcgcaaatgttggacggaagaatagagacaaacct
cgcaaaggagttggcagaaaataa
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