Neodiprion lecontei (redheaded pine sawfly): 107224167
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Entry
107224167 CDS
T09006
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03030
DNA replication
nlo03410
Base excision repair
nlo03420
Nucleotide excision repair
nlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107224167
03410 Base excision repair
107224167
03420 Nucleotide excision repair
107224167
03430 Mismatch repair
107224167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlo03032
]
107224167
03036 Chromosome and associated proteins [BR:
nlo03036
]
107224167
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107224167
DNA replication proteins [BR:
nlo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107224167
DNA Replication Termination Factors
ELG1-RFC complex
107224167
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107224167
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107224167
Check point factors
HRAD17(Rad24)-RFC complex
107224167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_22
AAA_11
AAA_14
AAA_assoc_2
ResIII
RCF1-5-like_lid
AAA_16
DUF815
AAA_24
DEAD
AAA_5
AAA_30
AAA_7
TIP49
AAA_19
ATPase_2
Mg_chelatase
PhoH
BrkDBD
AAA_3
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
107224167
NCBI-ProteinID:
XP_015519603
UniProt:
A0A6J0BZL2
LinkDB
All DBs
Position
4:complement(3040753..3043102)
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AA seq
328 aa
AA seq
DB search
MTQETPAVANLPWVEKYRPTKLEELISHEEIIKTINKFIKEDQLPHLLFYGPPGTGKTST
ILASAKQLYTPAQFTSMVLELNASDDRGIGIVRGQILNFASTRTIFKHGFKLIILDEADA
MTNDAQNALRRIIEKYTENVRFCVICNYLSKIIPAVQSRCTKFRFGPLAPEQIMPRLEYV
IDKENLTVEEDGKKALMTLSGGDMRKVLNVLQSTWLAYGSVTEETVYSCVGHPLPKDITS
IANWLLNENYVLAYCKIQDLKIKKGLALQDILTELHSFVNKIEFPDGILINLVVKMADIE
RRVATGCTEAVQLNALVAAFQCAREIQC
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggaaacaccagcagttgctaatcttccatgggtcgaaaagtatcggccaaca
aaattagaagaacttatatcgcatgaggagataataaaaacaatcaacaaatttatcaaa
gaggaccagttacctcatcttttgttttatggaccaccaggaacagggaaaactagtacc
atactagcatcagccaaacagctctatactccggctcaatttacttcgatggtattggaa
ctgaacgcttccgacgacagaggaatcggtatagttagaggacaaattctgaactttgcc
agcacgcgaacaattttcaaacacggatttaaattaattattcttgatgaggcggatgcc
atgacaaacgacgctcaaaatgctcttcgcagaatcattgaaaagtatacagagaacgtg
cgattttgcgtgatctgtaactatctaagcaagattattccagcagtgcaatcgcgttgc
actaaatttagatttggtcctctggcacccgaacaaataatgcctcgtcttgagtacgtg
attgataaggaaaacctaacagtggaagaagacggaaaaaaggcgttgatgacgttaagc
ggaggagacatgaggaaagtcttgaacgtactccaaagtacatggcttgcttatggatcg
gtaactgaggaaacggtttactcttgcgtcggacatcctcttcccaaggacataacgagc
atcgccaattggctactgaatgaaaactacgtactcgcctattgcaaaatccaggacttg
aaaatcaagaaaggattagctttgcaagatattttgacagagcttcattcctttgtaaat
aaaatcgagtttcccgatggcatactcatcaatttggtggtgaaaatggctgatatagag
cgaagagtcgcgactggatgcactgaggctgtgcaattgaatgctcttgttgcagcattt
caatgtgctcgagaaatacagtgttaa
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integrated database retrieval system
