Neodiprion lecontei (redheaded pine sawfly): 107224306
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Entry
107224306 CDS
T09006
Name
(RefSeq) spectrin alpha chain isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107224306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nlo04812
]
107224306
Cytoskeleton proteins [BR:
nlo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107224306
Intermediate filaments
Intermediate filament-binding proteins
107224306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
SH3_9
EF-hand_6
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
GvpG
Motif
Other DBs
NCBI-GeneID:
107224306
NCBI-ProteinID:
XP_015519798
UniProt:
A0A6J0C055
LinkDB
All DBs
Position
4:15582322..15591726
Genome browser
AA seq
2433 aa
AA seq
DB search
MDQITPKEIKILENPADIQERRDQVLGRYANFKSEARLKRDKLEDSRRFQYFKRDADELE
GWIYEKLQAASDESYKDPTNLQAKIQKHQAFEAEVAAHSNAIVLLDNTGSEMIAQHHFSS
DVIRKRLEELHRLWELLLSRLADKGLKLQQALVLVQFLRHCDEVMFWIHDKEAFVTTDEF
GHDLEHVEVLQRKFDEFQKDMASQEYRVTEVNELADKLLLDGHPERDTILRRKEELNESW
QRLKQLAILRQEKLFGAHEIQRFNRDADETMAWIAEKDVVLSSDDFGRDLASVQTLQRKH
EGIERDLAALEDKVATLGAEADRLAAIHQADHSQQIQSKHAEILQLWESLTAKAKERRSK
LDESYYLHRFLTDYRDLVSWMNDMRAIISADELAKDVAGAEALLERHQEHKGEIDARKDS
FDSTARAGQQLLDRKHYAADEVARKLESLAEDKKSLLDLWEKRRILYEQCMDLQLFYRDT
EQADAWMAKQEAFLANEDLGDSLDSVEALIKKHDDFNKSLAAQDEKIKVLDDFARKLIEG
DHYAAEDVFQRRQLLLERRGALLDKSAQRRQRLADAYTLQQFERDCDETKGWVNEKLKFA
TDDSYLDPTNLNGKVQKHQNFEQELNANNTRMEEILSTGQKLIDEEHYASDRIRARLDEI
TGLWDSLVQATDKKGSKLQEAAQQQQFNRTVEDVELWLSEVEGQLMSEDYGKDLTSVQNL
QKKHALLEADVASHADRIEGIAQAAQQFVSSGHFDADNIKAKQDQLVGRYAALQRPMSIR
KQRLLDSLQVQQLFRDIEDEEAWIREKEPVAASTNRGRDLIGVQNLQKKHQAVLAEVNNH
EPRVAAVCQSGAKMRNDGHFAAEEISQRLAALDDHWGQLKEKARQRKTDLDDSLQAHQYF
ADANEAESWMKEKRPIVLNTDYGKDEDSSEALLKKHEALVSDLEAFASTIGALREQAAAC
RQQETPTIDIAGKECVVALYDYAEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFV
PAAYVKRVEPEASLSASQQNLAREQSSIAARQAQIQAQYDDLLYLAHERQNKLNETAKAY
VLVREAAELATWIKAKENHAQVQDVGEDLEQVEVMQKKFDDFQADLKANEVRLAEMNEIA
VQLMSLGQTEAALKIQTQIQDLNEKWTSLQTLTAERASQLGSAHEVQRFHRDVDETKDWI
REKDAALNNDDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDEIANRLMQSHPDTAEQ
TYAKQKEINEEWTQLTAKANSRKEKLLDSYDLQRFLSDYRDLMAWINSMMGLVASEELAG
DVTGAEALLERHQSHRAEIDARYGILPEEHRTEIDARAGTFQAFELFGQQLLQSSHYASV
EIQEKLEAMAEARQELEKAWIQRRMQLDQNLELQLFCRDCEQAENWMSAREAFLGSADAV
DSGDNVEALIKKHEDFDKAINAHEEKIAALQTLADQLIAAEHYAAKPIDERRRQVLDRWK
HLKDALIEKRSKLGESQTLQQFSRDADEMENWIAEKLQLATEENYKDPANIQSKHQKHQA
FEAELAANADRIQSVLAMGTNLIDKHQCAGSEDAVQARLASIADQWEYLTQKTTEKSLKL
KEANKQRTYIAAVKDLDFWLGEVESLLTSEDAGKDLASVQNLMKKHQLVEADIQAHEERI
KDMNGQADSLIESGQFDAAGIQEKRQSINERYERIRNLAAHRQARLNEANTLHQFFRDIA
DEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELGSHEPAIQAVQEAGEKLMDVS
NLGVPEIEQRLKLLNQAWAELKQLAATRGQKLDESLTYQQFLAKVEEEEAWITEKQQLLS
VEDYGDTMAAVQGLLKKHDAFETDFAAHGERCKDICDAGAALVDAGNHRADSISQRCSQL
RNKLDQLSALAARRKARLNDNSAYLQFMWKADVVESWIADKETHVRSEEFGRDLSTVQTL
LTKQETFDAGLHAFEHEGIQNIATLKDRLVDSAHEQTPSIQKRHADVIARWQKLLADSDA
RKQRLLRMQDQFRQIEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALREAHA
QFQASLSSAEADFQALAALDRQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDVELA
KEAQRQEENDKLRKEFAKHANAFHQWLAETRTSMMEGSGSLEQQLEATKRKAQEVRARRQ
DLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGV
SEDALKEFSMMFKHFDKDKSGRLNQQEFKSCLRALGYDLPMVEEGQPDPEFENILDIVDP
NRDGYVSLQEYMAFMISKETENVQSSEEIENAFRAITAADRPYVTKEELYANLTKEMADY
CVARMKSYIDPKTERPITGALDYIEFTRTLFQN
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaataacacccaaggagattaagatccttgaaaatcctgccgacatacaggag
cgcagggatcaggtccttggacgttacgctaattttaaatccgaggctcgtttgaagcgg
gacaaacttgaggactcccgtcgctttcagtattttaagcgagatgcggacgaacttgag
ggatggatttacgagaagctccaggccgcttccgacgagagttacaaagacccgacgaat
cttcaagctaagattcagaaacatcaggcgttcgaagctgaggtagccgctcattcaaac
gccatcgtattgctcgacaacacaggctcagagatgatagctcagcatcatttctcctct
gacgttattcgcaagaggcttgaggaactgcatcgtctttgggagctgctcctttctcgt
ttggccgacaagggattaaaacttcaacaagctcttgttctggtgcagtttcttcgtcat
tgcgacgaagtcatgttctggatccacgataaggaggcttttgtcactacagacgagttt
gggcatgacttagagcatgtcgaggttcttcagaggaaatttgacgagtttcagaaagat
atggctagccaagagtacagagtaacagaggttaatgaacttgctgacaagcttctactg
gatgggcatcctgagcgcgatactattctccgtagaaaagaagagctaaatgaatcttgg
cagaggttgaagcagctcgctattctcaggcaggaaaaattgtttggtgcccatgagata
cagagatttaaccgagatgctgacgaaactatggcctggattgcggagaaggacgtcgtt
ctgtcgtctgatgattttggccgcgatttggccagcgttcagacacttcagcgcaagcat
gagggaatagaacgtgatctagctgctctggaagacaaggtggccactcttggtgccgaa
gcagatcgcctggctgctattcaccaggccgatcattcccagcagatccaatcaaagcat
gcagaaatattgcagctctgggaaagcttgacggccaaggcaaaggaacgaagatccaag
ttggacgagtcctactaccttcatcgattcttgaccgactacagggatcttgtttcatgg
atgaacgatatgcgagccattatatctgcagacgagcttgccaaagacgttgcaggagca
gaggcgctgctggagcgacatcaagaacacaaaggagaaattgacgcacggaaggacagt
tttgactcgactgctcgtgccggtcagcaacttcttgataggaaacattatgcagcagat
gaggtagccaggaagttggagtctcttgctgaggataagaagtccctgttagatctttgg
gaaaaacgtcgcattctgtacgagcaatgcatggacttgcagctattttatcgggacaca
gagcaggctgacgcctggatggcaaagcaggaagcattcctggctaacgaagaccttgga
gattccctggacagtgtagaagctctaatcaaaaaacatgacgactttaacaagtccctg
gctgctcaagatgaaaaaatcaaagtgctagatgactttgcccgtaagcttatcgagggt
gatcattacgcggctgaagatgtattccaacgtcggcagctcttgctcgagcggcgaggt
gcccttcttgataaatctgctcaaagaagacagcgtttggctgatgcttacacgcttcaa
cagtttgagagagattgcgacgaaaccaagggttgggtgaatgaaaaactcaaattcgcc
actgacgacagctacctagacccaacgaatttgaacggcaaagtacagaaacatcagaat
ttcgagcaggagttgaatgcaaacaatacgcgcatggaggaaattctcagcacagggcaa
aaactgatcgacgaagaacattatgccagtgatcgcattcgtgcacgtcttgacgaaatc
actggtctttgggacagtcttgttcaggcgactgacaaaaagggatctaaattgcaagag
gctgcacagcagcagcaattcaatcgaaccgttgaagatgttgagctgtggctgtctgaa
gttgagggccagcttatgtccgaagattacggcaaggatttaacaagcgtgcaaaatctc
cagaagaaacacgcgctgcttgaagctgacgttgcttcccatgctgatcgtattgaaggc
attgctcaagctgcgcaacaatttgttagttcaggacatttcgacgcggataatattaag
gcaaagcaagatcaacttgtgggtcgatacgcagcactgcaaagaccgatgagcattagg
aaacagcgacttcttgactcccttcaagtgcagcagttattccgagacattgaggatgag
gaagcgtggatcagggagaaagagcctgtcgcagcaagcactaaccgcggtcgagatctc
attggtgtgcaaaatttgcagaaaaaacatcaggctgtcttggcggaagtaaataatcac
gagccaagagtagctgctgtttgccaatcaggagcaaaaatgcgcaatgatgggcatttt
gcagctgaagaaattagccagaggctggcagctctcgacgatcactgggggcaattaaaa
gaaaaggctcgtcagcgcaaaacggatttagacgattccctgcaagcacatcagtacttt
gctgatgcaaacgaggcggaatcatggatgaaagagaaacgtccgatcgttttgaacacc
gattatggaaaagatgaagacagctcagaagctttgctcaaaaagcatgaagcccttgtc
agtgatttggaggcttttgctagcactatcggcgccttgagagagcaggcggctgcatgc
cgacagcaagagacaccgactatagacatagctggcaaagaatgcgtagtcgctctttac
gattatgcagaaaaatcaccaagggaagtctctatgaagaaaggcgatactctaacgctt
ctcaattcgaacaataaagattggtggaaagtcgaggtgaatgacaggcaaggctttgtc
ccggctgcttacgtcaaacgggtcgagccagaggccagtctgagtgcctctcagcaaaat
cttgccagagaacagagttcaattgcggctaggcaggctcaaattcaagctcagtatgac
gacttattgtacttggctcacgagcgtcagaataaactgaacgaaactgccaaagcgtac
gtgcttgtcagagaagcagcggaattagccacttggatcaaagcgaaggaaaatcatgcc
caggttcaagatgttggtgaagacttggagcaagttgaagtaatgcaaaagaagttcgac
gacttccaagcagatctgaaggcaaacgaagtccgattggctgaaatgaatgaaattgcc
gttcaactgatgagtcttgggcaaaccgaagctgctctcaaaattcagactcaaatacaa
gatttgaacgaaaagtggaccagccttcaaaccctgactgcggagagagccagtcagttg
ggctctgctcacgaagttcaacgattccaccgtgatgttgacgaaacgaaagattggatt
cgtgagaaggatgctgctttgaacaacgacgaccttgggaaggatcttcgcagcgttcaa
gctctccaacgaaaacacgagggtcttgaacgagacctagctgctcttggtgataaaata
aggcagcttgacgaaatagccaatcgattgatgcaatcgcatcctgataccgcggaacaa
acttacgccaaacagaaagagatcaacgaggaatggacacagctgacagcaaaagccaat
agcaggaaggagaaactattggactcttatgatttgcagagattcttaagtgactatcga
gatttgatggcttggataaactccatgatgggactagtggcatctgaggaactcgccggt
gacgtgacaggagccgaagcactgctggaacgtcatcagagccacagggcagagatagat
gcgcgttacggcatccttccagaggaacatcgcactgaaatcgacgctcgtgctggtacc
ttccaagcgtttgaactctttgggcagcaactattgcagtcgagtcactatgctagtgtg
gaaattcaggaaaaactggaagcaatggcagaagctcgtcaagaacttgagaaagcgtgg
atccagcgccgcatgcagcttgatcaaaatttggagctccaacttttctgccgagattgc
gagcaagctgaaaattggatgagcgccagggaggccttcctaggtagcgcggatgctgta
gacagcggtgataacgttgaagcgctaattaaaaaacatgaagactttgacaaggctatc
aatgctcacgaagaaaaaatcgcggccttgcaaacacttgccgatcaattaatagctgcg
gagcattatgccgctaagccaattgacgaaagacgtcgccaggttttggatcgctggaag
catttgaaagacgcgcttattgaaaaaagatctaaattgggtgaatctcagaccttgcaa
caattctccagggatgccgacgagatggaaaattggatcgctgaaaagcttcaacttgct
actgaggagaattacaaagatcctgctaatattcaatccaaacaccaaaagcatcaagcg
tttgaagctgagcttgccgccaatgccgacagaattcaatccgttttggccatgggcact
aacctgatagacaaacatcagtgcgccggttctgaagatgctgtacaggctagacttgct
tcgattgcagatcagtgggagtatctgacccaaaagacgactgagaagtctttgaaacta
aaagaggccaataaacagaggacgtacattgccgcagtgaaagatctagacttctggctt
ggagaagttgaaagtttactgacctccgaagatgctggcaaagatctagcatccgtgcaa
aatcttatgaagaaacatcagttggtagaagcagatattcaagctcacgaagagagaata
aaggacatgaacggtcaggccgattccttgattgagagtggacagtttgacgctgctggt
attcaggagaaacgtcagagcataaatgaacgctacgagcgtataagaaatctagccgca
cacaggcaagccagactcaacgaagccaacactctgcatcaattcttccgcgacattgct
gacgaagaatcatggattaaagaaaagaaattactcgttggttcggatgattatggtcgt
gacttgactggcgtgcaaaatctaaagaaaaagcacaagcgtctggaagcagaacttggc
agccacgaaccagctattcaggctgttcaagaagctggagaaaagctgatggacgtgtca
aacttgggagttcctgaaatagagcagcgtctgaaacttctcaatcaagcttgggcagag
ttgaagcaattggctgcgaccaggggtcaaaagcttgacgagtcactcacctatcaacaa
ttccttgccaaggtcgaggaagaggaggcttggattacggagaaacaacagctcctctct
gtggaagattatggcgacacaatggctgctgttcagggattgctgaagaaacatgacgca
ttcgagaccgattttgcagcacacggagaacgctgcaaagatatttgtgacgcaggagca
gcattggtcgacgctggtaatcaccgagccgattcaatcagccagaggtgctctcagctc
cgcaacaaacttgatcagctgtcggccctggcagccagacgaaaggcgcgattgaatgat
aattctgcatacctacaatttatgtggaaggctgatgttgtagaatcatggatcgcagac
aaggaaacacacgtgcgttccgaggagtttggtagggatttatcaactgtacaaactttg
ctaaccaaacaggaaacctttgatgcagggctgcacgcctttgaacatgagggaatccag
aatatagctaccctcaaggataggcttgtggactccgcccatgaacaaacaccgagcatt
caaaaacgtcacgccgatgtcatcgctaggtggcaaaaacttcttgctgattcagacgcc
aggaaacaacgccttctgcgcatgcaggatcaattccgtcagatagaagagctctatctc
acgttcgccaagaaggcatcagccttcaattcctggttcgaaaatgctgaggaagatctc
actgatcctgtacgttgtaacagcattgaagagattcgcgcccttcgtgaggctcatgca
caatttcaagctagcctttcgtctgccgaagctgacttccaggctttagctgctcttgac
aggcaaataaagagtttcaacgttggtccaaatccctacacctggttcactatggaagcc
cttgaagatacatggcgcaacttacagaaaataatcaaagagcgcgatgtcgaactggcc
aaggaagcccaacgtcaggaagaaaacgacaagctcagaaaagagtttgcaaagcatgcc
aatgctttccatcagtggttagctgagaccagaacatcgatgatggagggctcaggatca
ctggagcaacagctggaagccaccaagcgcaaggctcaagaagtgagggcccgaagacaa
gacctgaaaaagatagaagaccttggtgcaatattagaggaacatctgattcttgataac
cgatacacggaacacagtactgtaggccttgcacagcaatgggatcagttggatcaattg
ggaatgcgtatgcagcacaatttggagcaacagattcaagcccgcaatcaatcgggagta
tccgaggatgctcttaaggaattctcaatgatgttcaaacactttgataaagataaaagt
ggacggctcaatcagcaagagtttaagtcctgtctcagagctctcggctacgatttacct
atggtcgaagaaggtcaaccagatcctgaattcgaaaatattctcgacatcgtcgaccca
aacagggatggttatgtatccttgcaggaatacatggcgttcatgatcagcaaggaaaca
gaaaacgttcaaagctcagaagagatagagaacgctttcagagctatcaccgcagctgat
cggccatacgttacaaaagaggaactttatgcgaacctcacaaaagaaatggcagattac
tgtgtcgcccgtatgaaatcttatatcgatccaaagacggagcggccaattacgggggct
cttgattatatcgaattcacgcgtactcttttccagaattaa
DBGET
integrated database retrieval system
