Neodiprion lecontei (redheaded pine sawfly): 107224511
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Entry
107224511 CDS
T09006
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107224511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlo03032
]
107224511
Enzymes [BR:
nlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107224511
DNA replication proteins [BR:
nlo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
107224511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
POL2_thumb
Motif
Other DBs
NCBI-GeneID:
107224511
NCBI-ProteinID:
XP_046595770
LinkDB
All DBs
Position
5:15992472..16021757
Genome browser
AA seq
1482 aa
AA seq
DB search
MDEPASLQTGRSRRQKIDKKGRYSALEKLKQLKGSKNKYHVDELANVYEEVDESEYSKKV
QERQIDDWIVDDDGNGYVEDGREIFDDDLDSESIQQASQTKESGPRKKKSNSNKGKGNIR
NMLVGMPSKKETQVKLDDDDILNDLMAELKSGKQDVQPKKTREPNKFLVRPHTKLRTNEK
ITLPPKLQKPLLNVESASQQIDDNSEDEQLFDIATRSEKSMKKETDLKTTSQFCPSSVSI
SQAIDDDSDIETQNYSCRSSEAPFRTLEKAKPSHTNHIVDSMEEDINHYTDDLSSFDFED
SNQALTDTSKTTKALQPELKGKTVKPSVTNEDMLSDLWDDDFGEQITEMEISVDNSNLPL
HVNETGEKIFRFYWWDAFEDPYKQPGVVYLFGKVYIETAKAYVSCCIAVKNIDRRIYLLP
REHVKPTDTAEESETKAISMMDVYKEFNEYANKNGIKSFRSCTVTKSYAFEKKGVPKTSE
YLEVKYPAKDPAIASNYSGPTIEQVFGTSVNALELLLIERKIKGPCWLDVKCPLPTNSPV
SWCKVEVNCLKAENISVSISKYSTPPPPLIVATLNVRISFNTKSQQNEIAMIGVLLHNKY
HIDQPSPKPPFVQHFCLITRPEDAGWVMYSKESLIRRTQTELIHCDKERNLLEELLNRLQ
KADPDLLVGCDCGFQFDVLMHRMFNLRIPNWSRVGRLKRTLPPMYKGKVLIGQVLSGRLL
CDIQTSAKELNLKVRSYDLQSLCTNVLKGKEKDCREIKPEDTAKYYANIEKLVELVRLTM
LDASRIIMIMFELNVMPLALQITCIAGNILSRTLTAGRAERNEYLLLHAFNDRGYITPDK
RNTKADKNNIEKDESNSRKKKAAYAGGLVLEPKKGFYDTLILLMDFNSLYPSIIQEYNIC
FTTVPGAAYSDSTELCIPETCLEPGVIPTEIRKLVESRVQVKNLMKASNISPELRMQYNI
RQLALKLTANSMYGCLGATHCRFYAKGLAALVTAKGREILINTKDLVERLNYQVIYGDTD
SIMINTNVLDYEQVFAIGKQIKQEVNKLYKKVELDIDGVFKYLLLLQKKKYAAVTMTKLP
NGQIETTQEHKGLDIVRRDWCQLACEVGRNVLDQLLCEQPFDARLENIFEILRVVSKSLK
EGNVPLSSLVITKQLSKNPSDYPDRKQAHVSVALRLNEKGGRMWKAGDTVPYIICGDGTD
KSATERAYHVDELKNSETLKIDVNYYLLSQLFPVIMRICDPIDGIDDVLLSEHLGLEGIY
KPKQHFEHEEALPLLDDDKFKYCDHLKFTCQNEMCRTEITMDGAFTNTPTGLTPVLSKCS
NTDCSMAPWQYLPTIQNRLQLAIRAAIDQYYEGWMECEDPACFNKTRRVPQQIFGIHPVC
DLCQKCVMYRIYTETQLYNQISYYHHILDINKPTYKHLGSQLSTDVRNAYNILREFVEKQ
LRSSAYSIVNLTQLFSYLDSNWTKQKGMAGPRFYIEVSQLRR
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacctgcatctctacagacaggacggtcaaggcgtcagaagattgataaaaag
gggcgctattctgctttggagaagctgaaacagttgaaagggagcaagaacaagtatcac
gttgacgagctggccaacgtgtacgaagaagtcgatgagagcgagtacagtaaaaaggtt
caagaacgtcaaatcgatgattggattgttgatgatgatggtaatggatatgtcgaggat
ggtagagagatatttgatgatgatttggacagtgagagtattcagcaagcgtcacagacg
aaggaatctggacctcggaaaaagaagagtaattcaaacaaagggaaaggaaatattagg
aacatgctcgtaggaatgccctctaagaaagagacccaagtgaagctggatgatgatgat
atattgaacgaccttatggcagagttgaaaagtggtaaacaagatgtgcagccaaagaaa
actcgtgaaccaaataaatttttagtcaggcctcacaccaagttacggacaaatgaaaaa
ataacgctgccacccaagttgcagaagccattgcttaatgtggaatccgccagtcagcaa
atagatgataacagtgaagacgaacagctgtttgatatagctaccagaagtgagaagagc
atgaaaaaggaaacggatcttaaaactacatcacagttctgcccatcatccgtcagtata
agtcaagcgattgatgatgacagtgatatcgaaacgcaaaattatagttgtagaagttca
gaagctccttttcgaactctggaaaaggcaaaacctagtcacacaaatcacatagtcgat
agcatggaagaggacatcaaccattatactgatgatttatcaagtttcgactttgaagat
tcaaatcaagcattaacggacacgtcgaagacaaccaaagccttgcagccagaattaaag
ggaaaaaccgtaaagccttcagttacgaacgaggatatgctgagtgatttatgggatgat
gattttggagaacaaataacggagatggaaatatcagttgataattcaaaccttccttta
cacgtcaatgaaacaggtgaaaaaatatttagattctactggtgggatgccttcgaagat
ccttacaaacaacctggcgtggtctacttgtttggcaaagtttatattgagacagctaag
gcctatgtttcctgttgcattgcggtcaagaatattgacaggaggatctacctcctaccg
agagaacatgtaaaacctacagacactgccgaggaatcagaaacaaaagcgatttcgatg
atggacgtttataaagaatttaacgaatacgcaaacaagaatggcatcaagagtttccgc
tcttgtacagttacaaagagttatgcatttgagaaaaagggtgtacctaaaacatcggaa
tacttggaagttaaatacccagccaaagatcccgctattgcttccaattatagtggacct
acgattgaacaagtgttcggaacatctgtcaatgcactggagctactgctgattgagcga
aaaattaaaggtccgtgctggttggatgtcaaatgcccattgcctaccaatagtccagtc
agctggtgtaaagtggaggtcaattgtttgaaggcggaaaacatatcggtatcaataagc
aaatatagcactccaccacctccgttgattgtggcaacacttaatgtgcgaatatccttt
aatacaaaatcgcagcagaacgaaattgccatgataggagttcttctgcataataaatat
catattgaccagccatcaccgaagcccccgtttgtacagcatttttgtttgattactaga
ccagaagatgcgggctgggtaatgtattcgaaagaatctctaatcagaagaacccaaacg
gaattaattcactgcgacaaagagcgaaacttgcttgaagaactattgaatagactgcaa
aaagcagatccagacttgttagtcggatgtgactgcggatttcagtttgatgttctcatg
cacagaatgttcaacttgagaataccaaactggagcagagttggaaggttgaagcgcact
ctacctcccatgtacaagggcaaagttttgatagggcaagtactgagtggtcggttgctt
tgcgacatccagacgtcagcgaaagagttaaaccttaaagtcaggagttatgatttgcag
tcactttgtacaaatgtcttgaaggggaaagaaaaagattgcagagaaattaagccagag
gataccgcaaagtattatgctaatattgagaaactagtggaactggtgagacttacaatg
cttgacgcatcacgcattatcatgataatgttcgaactcaacgtcatgcctctagcacta
cagatcacttgcattgctggaaatattctttcgagaactctgaccgctggccgagccgag
agaaacgagtatcttttgctacacgcttttaatgatagaggctatattacacctgataaa
cgaaacactaaggcagataagaacaacattgaaaaggatgaaagtaattctcgtaaaaag
aaagcagcctatgcgggtggtttggttttggaacctaaaaaaggattttacgacactttg
attttactcatggacttcaattctttgtatccaagtatcatacaagagtataacatatgc
tttaccaccgttcctggagctgcctacagcgacagtacagaactttgtattcctgaaaca
tgtttggagccaggagtcattccaacagaaatccgtaaactagtcgagagccgtgtccaa
gttaagaatcttatgaaggcatccaatatttctcccgaattgcgaatgcagtacaacatt
aggcagttggcccttaaactgactgccaattctatgtatggatgtttaggagcgacacat
tgccgattttacgccaagggattggcagcattggtcacagcaaaagggcgagaaatctta
attaatacaaaagatttagtggagagattgaactatcaagttatctatggtgacactgat
tcgattatgatcaatacaaatgttctagattatgaacaagtgtttgcaattggtaaacaa
atcaaacaggaagtgaacaagctttacaaaaaagtagaattggacattgatggtgtgttc
aagtatctcttgcttttgcaaaagaaaaaatacgctgcagttacaatgactaaactaccc
aatggtcagatagaaacgacgcaggaacacaagggtttagatatagtcaggagagattgg
tgccaattagcctgtgaagtaggaaggaatgtactggaccaattgctgtgtgaacagcca
tttgatgcaaggttagaaaatatatttgaaatcttgcgggttgtttcaaaatcgctgaag
gaaggtaatgttccactttcgtcgcttgttataacaaaacagttatcaaagaatccaagt
gattatccagacagaaaacaagctcatgtcagtgttgctttacgcttaaacgagaaaggc
ggacgtatgtggaaggctggcgatacagtaccgtacattatttgcggggacggtacagat
aaatctgcaactgaaagagcgtaccatgttgacgagttgaagaacagcgagactttgaaa
atagatgtcaactactatttacttagccagttattcccagtcataatgcgaatttgcgat
cccattgatggcattgacgacgttttgctgtcagagcatttaggtttggaggggatctat
aaaccaaagcagcactttgagcatgaggaggcattaccattgctggatgatgacaaattc
aaatattgtgaccacttgaaattcacatgccaaaatgaaatgtgtcgaacagaaataact
atggatggggcttttacaaatactcccactggtttgacgccagtgctatcaaaatgctcg
aacacagattgctccatggctccgtggcagtacttaccaaccattcaaaatcggcttcaa
ctagccatccgggctgcaatcgaccagtattacgaaggctggatggagtgtgaggatccg
gcatgttttaacaagactcgaagagttcctcaacagatctttgggatacacccagtctgt
gacctctgtcaaaagtgtgtcatgtacagaatttacactgaaacccaattgtacaaccag
atcagttattaccaccatatactagacatcaacaaaccaacatacaaacatttaggatcg
cagctttccactgatgtaagaaatgcgtacaacatacttagggaattcgtggaaaagcaa
ttacgaagcagtgcttattcgattgttaatctgacgcagctgttctcatatcttgattcc
aactggacgaagcagaagggaatggctggaccacgattttacatagaggtctctcaactc
cgacgatga
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integrated database retrieval system
