Neodiprion lecontei (redheaded pine sawfly): 107224561
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Entry
107224561 CDS
T09006
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107224561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107224561
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107224561
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
107224561
NCBI-ProteinID:
XP_015520147
UniProt:
A0A6J0C0T1
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Position
6:3470228..3476181
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AA seq
918 aa
AA seq
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MNADESDSESSDSSNEFMVAPDKLKSISPFFTKPTRKTASVPKKLESSEESDFDYENESH
DNNDDLMAQVLKNLEATKKSQAIQSDQSSAEKPENTKPVKKELTNEIADLLLLGETGATA
STAEQDQDEPDEEGPAEDSAPSNYSIPKEGVKITLVDSKLIFNQRKKKKQETLEDLLKKK
LNQQLRSNQVLIHKVGLLCWMAHGFYVNKQINNPILLAAALKLAPKNCYPKGRVDLSYLE
KITKWFQGVFTFPTGKPESGITTLNLLRRLKDKEIHNYQELVLLYVATLRALGLTCRLVI
SLQPPALKVTKEQLIAPESSKVKDTKVKKEPKKETATRSPKISQETKIPGQETEKGNISA
RLRKATEARRRAAEILKRKKSTNSDSAEDVKPPAKKLRSRTVAAAIPVDKKGKRNSDKVK
NDKEVTEKGGRSLRSRAKTAVKHWPKDEDTDDDDDDDDEYKMDDDKEENEDGEEDTDDEP
FEKTHRSKHKASASKQRSRSQNKNTVSKIKKQSNTGSRRSSTARKLISSDEDDEENNEKP
KKVKNTRDMWAEVYVECEENWISVSVPDAKIHCIAELYKNATDPVLYVMALNSEGRIKDV
TRRYCPHWLTVTRKQRIDEKWWLEAHTPWKEPETALTKAEDEMLKQKELEQPLPKTVSEC
KGHPLYVLPRHLLKFEAFYPPDVVPLGYVRGEPIYSRHCVHTLRSRETWIKSARVVKPGE
NCYKVVKARPKYDKLSGARLKDESLEVFGKWQTDPYVPPEAKDGIVPRNEYGNVDLFKQC
MLPKGTVHIQLPALNRIARKLDIDCAPAVVGFNFGGHGALPAFDGFIVCEEFEDVLREAW
EVEQAEADKRAREKYEKRVYGNWRKLIKAVFIRERLTAKYDFNADEEKEKSSTSNKQTNK
RVKQTKVGGKKTKVDKKK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgatgaatctgacagcgagagctcggacagtagtaacgagtttatggtagcc
ccggataagctgaagtcaatatcaccgtttttcacaaaacctactcgaaaaacagcgagc
gtaccaaagaagctcgaaagttcggaggagtcggattttgattacgaaaatgaatcccac
gataacaatgatgacctcatggctcaggtcctcaagaaccttgaggcgacgaagaaaagt
caagcgattcaatctgatcagagcagcgcggaaaaacctgaaaataccaaaccagtgaaa
aaagaactcaccaacgaaatagctgatcttctactcttgggagaaactggagcgacagct
tcaactgcggagcaagatcaggacgagccggacgaagaaggaccagctgaagactccgct
ccgtctaactacagcattccaaaagaaggggtaaaaataaccctggtcgattcgaaactg
attttcaatcagaggaagaagaagaaacaggaaacgcttgaagatttgttgaaaaagaag
ttgaatcaacagcttaggtccaatcaagtattgatacacaaagtaggactcctctgttgg
atggcgcacggtttttacgtaaacaagcaaattaacaatccgatattacttgcagctgca
ctaaaattggcaccaaaaaactgctacccaaaaggcagggttgatctgtcttatcttgaa
aaaatcaccaaatggtttcaaggtgtgtttacgtttcctacgggcaagccagagtccggc
attacgacgctgaatttattgaggagactcaaagacaaagagatccacaattatcaagaa
ctcgtattactctacgtagcaacgctaagagccttggggctgacctgtcgcttggttata
tccctgcaacccccggctcttaaagtaacaaaagagcagctcatcgccccagagtcttcc
aaagtgaaagatacaaaggtaaaaaaggaaccgaaaaaagaaacggccaccagaagccca
aaaatatcacaagaaacgaaaattcctggacaagaaacggaaaaaggaaatatatcagcc
aggcttcgcaaagccactgaggccaggagaagggcagctgaaattctaaaaagaaaaaaa
agtacgaattcagattctgcggaggatgttaaaccaccagctaaaaaattgagatcaaga
acggtggctgccgcgattcccgttgacaagaagggcaaaaggaactctgataaagtgaaa
aacgacaaagaggtgactgaaaaaggtggaagaagtttaaggtcgcgggcaaaaacagct
gtcaagcattggccaaaagatgaggatacggatgacgatgatgatgatgatgatgaatac
aaaatggatgatgataaggaggagaatgaggatggcgaggaggatacggatgatgaacca
tttgaaaaaactcacaggtcaaagcacaaagcatcagcttccaagcagcgttctcgcagt
cagaataaaaacactgtatctaaaattaaaaaacagtcaaatacaggttcaaggagaagc
tcaaccgccaggaagctgatatcgtctgatgaagatgatgaagagaataatgagaagcca
aagaaagtgaaaaacacaagggatatgtgggcagaagtttacgttgaatgcgaggaaaat
tggataagcgtcagcgtaccggatgcaaaaattcattgcattgccgagctatacaaaaat
gctacggatccagtgctgtacgtcatggccttgaattctgagggtcgaatcaaggatgta
acacgccgatattgtccccactggctgaccgtgacccgcaaacaacggatcgatgaaaag
tggtggctggaagctcacactccttggaaagaacctgaaacagccttaacaaaagcagag
gatgagatgctcaagcaaaaggaactggaacaacccctaccaaagacagtttcggagtgc
aaaggtcatcctctgtacgttctgcccagacatcttctcaaatttgaagccttttacccg
ccggatgtcgttccacttggctacgttcgtggcgagcctatatactctcgtcattgtgtt
cacacattgcgctcccgcgaaacgtggatcaaaagcgctagggtagtgaaaccaggagag
aattgctacaaagttgttaaagcaagaccaaaatatgataagctttcaggtgccaggctg
aaggatgagtctctggaagtatttggaaaatggcagacagatccgtacgttccaccagaa
gccaaggatggcattgtgcctcggaatgaatacggaaatgtggatttattcaaacagtgt
atgttgcctaaaggaactgttcacattcagcttccagcactgaaccgcattgcaagaaag
ttggacattgattgtgctccagctgtggtgggcttcaatttcggaggacatggggcgctg
cctgcttttgatggatttattgtttgtgaagagtttgaagatgttttacgggaggcttgg
gaagtggaacaagcagaggcagataagcgtgccagagagaaatacgagaagagggtttac
ggaaattggaggaagttgattaaagctgttttcatcagagaacgactaacagctaaatat
gattttaatgctgacgaagaaaaagaaaaatccagcacatccaataagcaaacgaacaaa
cgggtaaaacaaaccaaagttggtgggaaaaaaacaaaggttgacaaaaaaaaatag
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