Neodiprion lecontei (redheaded pine sawfly): 107224622
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Entry
107224622 CDS
T09006
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107224622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107224622
Membrane trafficking [BR:
nlo04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107224622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
PAC11
DSE1_N
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_SCAP
WDR72_alpha-sol
Beta-prop_NOL10_N
NBCH_WD40
TRM82_WD
BBS2_CtH
Motif
Other DBs
NCBI-GeneID:
107224622
NCBI-ProteinID:
XP_015520235
UniProt:
A0A6J0C109
LinkDB
All DBs
Position
3:1199386..1217174
Genome browser
AA seq
1512 aa
AA seq
DB search
MTAGNSLVVPIVLWGRVAPTHCISCIYLSRDQKTLVTGCYDGQICLWQVDPETLKMTPRC
LLVGHTAPIMCLSRASVIMEQNYIVSSSESGEMCTWDLIDGKCREAVKLNNIHTQMLPYV
SAGGEDIRLFCSGYYPEVLVMDPFSLEVLFTLSSRVNPDWISALHVLRPAKRKGRFLVHT
NDVVLALTTTGTVKVWTLLGHENRHSEPLYEHESKQIRCLNALAMTCCPYNQRTVLIVCS
KYWQIFDAGDFSVLCSVTAPRGERWMAGDFLAADRVVLWSDEGHGYLYKLPANKLKGKAL
SSSVADNKEFHTPAAECDQPYLYYTLTQPGDKPLSCPPAMRLVTVQKHNKTSKYLLRGDS
EGVVVLWTLPEISSQQLTQINQKDYKPTSLPPTIKTSLTAAWEAMKPPPVGILDQLDSGD
GHGIKLTSSIYLPQQSRLVLGREDGSIIIVPATQTVMLQLLHGNHQQYDDWPPHQVLLGH
SGRVNCLLYPHGAAPRYDRTHLVSGAVDFAVCLWDLYAGTLIHRFCVHAGEITQLMVPPD
NCSPRLQKCVCSVASDHSVTLLSLAERKCVVLASRHLFPVVTIKWRPLDDFMIVGCSDGA
VYVWQMETGHLDRVLHGIIAEEVLYACDENTIAATGGTAAGGELGLANPAVHFFRGLRHR
NLSAIRHATQRGLHQLQQLHGGAGSDHGNQIKAKGAPLMIQGLRTNPKDPESHILFFDIE
ALIVQLLSDEYGSMSPGSLEAQGLISAAEYHKVAALTQSASPDAHKKIADFFGRVKDKAG
DVERILKEKDRHGILAKMKEGAENVQTKLQAKVESVGLKPSTLDGKGEGWNNNDLPKNSL
KRNGAFSEPNAAMEVAQLLLSLLHAWGMDPDLDRVCEGKLGLLRPMVPVSFGVLSKGGYM
SLLLPTWQTQLEPAGEPATQLEQRLPVELVRQERLTRAFTARAHWELSTTLTSNHLLAVV
SLANTLMSMNNATFVPEQERNRKLHRPGNRVAVSWNKAEEENEEMYTVQQAQIKQGWSLL
ATLHCVLLPDKVAAQGGAKSFKRPQVEMMARRWQHQCLEVREAAQALLLAELGRMGPKGR
KALVDNWSQYLPQYSTQEPIAPQSQNHSPPPGSPVPTIEQQQEEEEEDEEGAEELSIARK
PSSIAELKQKQTTAVVLLGVIGAEFGQDVTNARERRDSEQRRKSSVVEGFGIGNNNLARH
TSMALTHLLHAPHSSKLPMHTALRRAAIDLIGRGFTVWEPYLDVSKVLLGLLEMCCDADK
LVPSMTYGLPLTPQADSCRTARHALMLIATARPAAFITTMAREVARFNTLQQNAQTLNVN
LAASVLARAKPEILRIVEQLIDKMQSEMSDLLVEVMDIILHCLDPGHLKMKPLNDVFPAV
CRFNQVSHCPTTRRIAVGGRGGQLALYELRGNVKCQTVTAHQAPVTALAFSPEGKFLVSY
SCSENKLCFWQQTSSGMFGLGNSQTRCIKSYSTAPINDVSRLNPMRLARLIWINNRTVTL
MLADGSETRFNV
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaggcaacagtttggtcgtaccgattgtgctgtggggaagagtagctccgact
cattgtatctcctgcatatacttgtcgagggatcagaaaactctcgtgacaggatgctac
gacgggcagatatgcttgtggcaagtcgaccccgaaactctgaagatgactccacgttgt
ctgcttgttggacatacggcaccgataatgtgtctgagccgagcaagcgtgataatggag
caaaactatatagtcagcagcagcgagagcggggaaatgtgcacctgggatttgatcgat
ggaaagtgtagggaagctgtcaagctcaataacattcacactcagatgcttccttatgtt
tcggctggaggcgaagacatcaggctattttgctctggttattatccagaagttttggtc
atggatcccttcagcctggaagttttgttcactctaagctcccgcgttaatccagattgg
attagcgctttgcacgtcctgcgaccggccaaacggaaaggtcggttcctcgtgcataca
aacgacgtagtcttggcattgactacaacggggacagtgaaagtctggactctactgggc
catgagaaccgccacagcgagccgttgtacgagcacgaaagcaaacaaattcgctgcctc
aacgcattggcgatgacgtgctgcccctataatcagagaacagtactgatagtatgctcc
aagtattggcagatatttgacgccggagatttctcagttctctgttctgtaacggcgcct
cgcggcgaacgctggatggcgggagattttttggccgctgacagggtcgttctttggagt
gacgaaggtcatggttatctctacaaattacccgccaacaagctgaagggcaaggctctc
agcagtagcgtagctgacaacaaggagtttcatacccctgcagctgagtgtgatcaacca
tatttgtactacactctgacgcagccaggcgataagccattatcgtgtcctccggcgatg
cgactggtcacagttcagaagcacaataaaacttcgaaatatttactccgaggcgatagc
gaaggtgtcgttgtcttatggacactgcccgagatctcatctcaacaacttacgcaaatc
aatcaaaaagattataaacctaccagtctaccgccgactataaagaccagtctaacggct
gcttgggaagcaatgaaaccacccccagtcggaattcttgatcagttagactccggcgat
ggtcacggaattaaattgacttccagcatttacttgccgcagcaaagtcggcttgttttg
ggcagagaagacggtagcataatcattgttcctgctacccaaaccgttatgctgcaactt
ttgcacggcaatcatcagcagtacgacgactggccacctcatcaagttttactcggacat
tctggcagagtaaattgcctgctgtatccgcacggggctgcgccgagatacgatcggacg
catttggtgtccggagcagttgactttgccgtatgcttgtgggatttgtacgcgggtaca
ctgatccatcgcttctgtgttcatgctggagaaattactcagctaatggtgcctcccgac
aactgcagtcctcgactacaaaaatgtgtctgcagcgttgcctcggaccacagcgttacg
ctgctctccctggctgagaggaaatgcgttgttctagcttcaaggcacttgttccctgtc
gttacgataaagtggcgtccactcgacgacttcatgatcgtcgggtgttccgacggtgcc
gtttacgtctggcaaatggaaactggacatttggacagagttttacatggtataattgcc
gaggaggtcctttatgcttgcgacgaaaataccatagcagctaccggaggcactgcagct
ggaggtgaactgggactggcaaatccagccgtgcatttcttccggggtctgcggcaccgg
aatctttcggcaattagacacgctactcaacgtggattacatcagttgcaacagcttcac
ggaggcgctggaagcgatcatggtaatcagataaaggcaaagggtgcgccgctgatgata
cagggactcaggacgaacccaaaggatcctgagagccacatactcttctttgacatcgag
gcactcattgtgcaactgttgagcgacgagtacggatccatgtcacccggatcactcgag
gctcagggtctgatatctgcggctgaataccacaaggttgccgctcttacgcagtcagct
agtccagatgctcacaaaaaaatagctgattttttcggccgtgtcaaggataaggccgga
gacgttgaaagaattctcaaggaaaaggatcgacacggtatattggctaaaatgaaggag
ggcgccgaaaacgtccagactaagttgcaggccaaggttgaaagcgttggtttaaagccg
tccactcttgacggcaaaggtgagggttggaataacaatgatttaccgaaaaacagtttg
aagagaaacggagctttcagcgagccaaacgctgcaatggaagtagctcagttactgctc
agccttcttcacgcttggggaatggatcctgatctggacagagtgtgcgaaggaaaattg
ggtctgctcaggcccatggtacccgtttcattcggcgttttatccaaaggaggatacatg
tctctgctacttccaacctggcaaactcagttggagccagctggtgagcctgcgactcaa
ttagaacaacgtttgccggttgaattggtgaggcaagagcgcctcacaagagctttcacc
gctcgagctcactgggaattgtctacaactttgacaagtaatcatctgctcgctgtcgta
tcactggcaaacaccctaatgtccatgaacaatgctacgtttgttcccgaacaggaaaga
aatcgtaaattgcatagaccgggaaacagagttgcagtgagctggaacaaagcggaggag
gaaaacgaagaaatgtacaccgttcagcaggctcaaatcaaacaaggctggtcgcttctt
gctactctacattgcgttcttttacctgataaagttgcagcccagggaggagcgaagagc
ttcaagcgaccccaagtcgaaatgatggctagacgatggcaacaccaatgtctggaggtc
agagaagcggctcaggctcttttattggcagaacttggcaggatggggccaaaaggcaga
aaggcacttgtggacaattggtcacaatatttaccccagtacagtacacaagaacccatt
gccccacagtcccaaaaccacagccctccaccaggcagcccagttcctacgatagaacaa
caacaggaagaggaagaagaggatgaagaaggtgcggaagaattaagtatagcgagaaaa
ccgtcgagcatagcggagctgaagcaaaaacagacaacggcagttgtactgctcggtgtg
attggggcggagttcggacaggatgtgactaacgccagagaacgaagagacagtgagcaa
agacgaaagagttctgtggtcgagggattcggaattgggaataacaatcttgcccggcat
acaagcatggctctgacgcatttactccacgcgcctcattcctcgaaactaccgatgcac
acagccttgcgcagagctgcgatagacctcatcggccgcggcttcacggtctgggagcca
tacctcgatgtttcgaaggtcctgcttgggctcctagaaatgtgttgcgatgccgacaag
ctagtgcccagtatgacttacggcttaccgctaacgcctcaagctgacagctgcagaacc
gcgaggcacgctttgatgctgatagcaacggccagaccagccgcatttatcacaactatg
gcgagagaagttgcgcgatttaatactctccagcaaaacgcacagacgttgaatgtcaat
ctcgctgcaagcgtactcgccagagccaagcctgaaatactgagaatagttgaacaattg
attgacaaaatgcagagtgaaatgagcgatttactggttgaggtcatggacatcatactc
cattgtctcgatcctggtcatcttaaaatgaaaccactgaacgacgtatttcctgctgtc
tgtaggtttaatcaagtaagccattgtccgacgactcggcggatagcagtcggaggtcga
ggagggcaattggcgctctatgaactacgaggaaatgtaaaatgccaaacggttactgct
catcaagcccctgtaactgcgctggcattttcgcccgaggggaaatttttagttagttat
tcatgttcggaaaacaagctgtgcttttggcagcagacaagcagcgggatgttcggacta
ggaaattctcaaacccgttgcatcaagtcgtacagcacagcacctatcaatgatgtttca
cgtttgaatccaatgcggctggcccgtttaatatggataaataatcgtaccgtcacgtta
atgttagccgatggctcggaaacacgattcaatgtttaa
DBGET
integrated database retrieval system
