Neodiprion lecontei (redheaded pine sawfly): 107224809
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Entry
107224809 CDS
T09006
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107224809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107224809
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107224809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
107224809
NCBI-ProteinID:
XP_015520490
UniProt:
A0A6J0C1R3
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Position
2:complement(26078842..26086820)
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AA seq
540 aa
AA seq
DB search
MSSTAVTKPGAVPSVQEYSIRVPKNSKKKHNVMRFNATLNVDFSKWSQVKMERENNMKEY
KGMDEEMPKFGAGSEFGRDAREEARRKKFGITSRKYKPEDQPWILKSGGKTGKKFKGIRE
GGVSENAAYYVFTHAPDGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNRVMNYFS
LMMRKRMRNDDEGAEDDPELSEGGKGKKLGKKEKELKISEMDEWMDSDDDDSSSDEDKEK
KNSEEEEDDKKKKKKAKEEAQKKKKKKKKGSDDEAFEESDDGDEEGRECDYISDSSDSES
ELEQQKEIKSVAEEDALRKLLASDEDSQGEENEEEKKDGEDDKDDDEDNKDKDEKEKDNK
LNKESDKKKDKKKKKKQSKKKDVKKSGIGKDSSSDFSSDSGSDSDIPREKDSKKPNSAQS
SRSVTPVLPGVSADCFKRKQSGSPDLSQSKKIKLDNFNSAPVTSYFPGASESGITEDAVR
RYLMRKPMTTTELLQKFKSKKTGLTSEQLVNVMTQILKKINPVKQTIKNKMYLSIKAQHN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacagctgtgacgaagcctggcgcagtaccttcggtacaagaatatagcatc
agagttccaaagaacagtaaaaaaaagcacaatgtcatgcgatttaatgcaacactcaat
gttgacttttcaaaatggtcgcaagtcaagatggagcgtgaaaataacatgaaagagtat
aaaggaatggatgaggagatgccaaagtttggagcaggatccgagtttggtcgcgacgca
agagaagaagcaaggcgaaaaaagtttggaataacaagtagaaaatacaaaccagaagat
cagccttggattcttaaatcaggaggtaaaacagggaagaagttcaaaggaattcgagaa
ggtggagtcagtgagaatgcagcatactatgttttcactcatgcacccgatggtgccatt
gaagcatttcctttgcatgaatggtataatttccagccaatacaaagatataaagctttg
agtgctgaagaagctgagcaagagtttagtaggcggaatagagtcatgaattacttttca
ttaatgatgcgaaagagaatgcgaaacgacgacgaaggcgccgaagatgatccagaatta
tctgaaggtggtaaaggaaaaaaacttggtaaaaaagaaaaggaattaaaaatatcagaa
atggatgaatggatggatagtgacgatgatgattcgagttctgacgaagacaaggagaaa
aagaattctgaagaagaagaggatgataaaaaaaagaaaaaaaaagctaaggaggaagca
caaaaaaagaagaaaaagaagaagaaggggtcggatgacgaagcatttgaagaaagtgac
gatggagatgaagaggggagagagtgtgattatatatctgactcttcagattctgaatca
gaattggaacaacaaaaggaaataaaatctgtggctgaagaagatgctctacgaaagctt
cttgcttcagatgaggatagtcaaggggaggagaatgaggaggaaaagaaggatggagaa
gatgacaaagatgatgatgaggacaacaaagacaaagatgagaaggaaaaagacaacaaa
ctcaataaggagtccgataaaaagaaagataagaagaaaaaaaagaagcaatcaaaaaaa
aaagacgtaaaaaaatctggaattggaaaagattcatcaagtgacttctcaagtgattct
ggatccgactctgacatacctagagaaaaagacagtaaaaaaccaaatagtgcacagagt
tcaaggtctgtgactcctgtccttcctggagtctcggctgattgttttaaacgaaaacaa
tcaggctcaccagatctgtcacagtcgaaaaaaatcaaattagataatttcaactctgcc
ccagtgacatcatactttccaggagccagtgagtctggtataacggaggatgctgtcaga
cgttatctgatgcgcaaaccaatgacaaccactgagcttctacagaaattcaagtccaag
aaaacgggtttgacctcagagcaattggttaacgtcatgacacagatattgaagaaaata
aatcctgttaaacaaactattaaaaataaaatgtatctgtcaatcaaggcacaacataat
tga
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