Neodiprion lecontei (redheaded pine sawfly): 107224892
Help
Entry
107224892 CDS
T09006
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nlo04040
]
107224892
Ion channels [BR:
nlo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107224892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_2
VWA
VWA_3
Arg_repressor_C
Motif
Other DBs
NCBI-GeneID:
107224892
NCBI-ProteinID:
XP_015520616
UniProt:
A0A6J0C024
LinkDB
All DBs
Position
1:40444637..40451808
Genome browser
AA seq
1253 aa
AA seq
DB search
MSHNENLVVRFSVILIVLLVPGVSVARDAKTVEQWAERIGSELWQLANATARSDDLKNQY
VKQNARIEEKSGQEMVKSISDSVGRMLSRKMDAVRCILKKAEEAAELYNASGLPDRLHLT
NETIPSMNMSYFSGKYSSVNNVPVKLPESLLNTSAMYSPMNLTADSHFYNIPVNTDFSSV
HVPTNVYDLDVKVNAAIQWSKALDQVFRQNYRSDPALSWQYFGSSTGILRLYPAIQWRTE
GDKPDLYDCRMRSWFIESATCSKDMVILIDISGSMQGMGYSIAKTTAVEILGTLSNNDFV
TIIAYTNETTEVVPCFNGTLVQATPENIAVFKDGLEKLNTTNPTILSKAFNKAFDLLETF
RTSKQCNASNPCTQAIMLLTDGVPGDVAEVFAERNRLENGTYMPVRVFTYLLGRDVTKTP
EIQSMACSNRGYYSHVHTLSEVREQVLKYINVIARPLVLQKDIHPLSWTHAYADISNPAL
ATWLGLVMEHPEQKSRLITHLKGKEQGVQINEDAIYIQKPNAEDSNSSTALKTAYQEYRL
LTSVSVPAFDRKGNRNNETKLANLLGVAGTDVPLDEINRLTLPYKLGVNGYAFIVSNNGY
AILHPDLRPAYKGTLKLNYNSIDLTEVEVIGEDLGPRIPGEEVLTLRAALVNHRNGTLSN
VTIKFHYDDYRRVTFEKRNYFYEALPGTPFGLAIALPEYGTKWINVGEEIKKNWNMGRKI
MDYFRGDRWRIHPGWVYCRFHYLEGHEFDRPEDEVKFFLESLDNPDTWEWHEQYETKSDS
NNTNEKVENNEESRMKQDELEPSADEDDESTVETEYATDDGDYMYPYDEKMSENENDTQP
CNRKTLDDNAYYCNKELMELLVFDAKATNVSFTGRFIFSNETERQLAAMYGVFLRFVATQ
SGLTRWQDVGDSPDVENDSWFWNQGEENIKLEFGDLHRRAVNEPWYKGAIFQHTVDPESI
SVTVPTIRGADAVVTVAQAIFPKDGAQKAPAAVIGFQMPMESLYARFQDLTQDHTESNFS
CASAVIDCYLIDQNGYVVVSDLNETGIFFGTVQGGVMKSMIYQGAYKPVVFYDYQALCSY
PTFKGAANFLKTPFHHLAQLSTWLITRLMWLTLQIVEFPVAWSKKDMNEDAPAPPPPPKR
VIEHYACDEKRTLYILQPKLAEHLTNVSDYPSRPFYAEKVPFTNLVLVVVNVSYPSSYER
IELHPTEIRPEFYSNGGQEFPCHKLNLTHLERRGLEGCYAEDPGEDEIKDCGA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaacgagaacctcgtcgtcaggttctccgtaatactcatcgttctacttgta
cccggtgtcagtgtcgctcgagatgccaaaacagttgaacaatgggcggaaagaatcggc
tcggaactgtggcagcttgcgaatgctacggcacgctcggatgatttaaagaatcaatac
gtgaagcaaaatgcccgaatcgaggagaaatcgggacaggagatggtcaagtcaatctca
gacagcgttggacgcatgttaagtcgaaagatggacgcggtccgctgcatcttgaagaag
gccgaagaagcggctgagctatacaacgcatccggacttcctgacaggctccatctaacc
aacgagacaatacctagtatgaacatgtcctacttctcgggcaaatacagttctgtcaat
aatgtgcctgtcaaattgccggaatccctcctcaacacatccgccatgtacagcccgatg
aacctcactgcagattcgcacttttacaacatccccgtgaacacggacttctcctcagtc
cacgtgccaacgaatgtgtacgatctggatgtgaaggtaaatgctgcgatacaatggtcg
aaggccttggaccaagtatttcgacaaaactacagatccgacccagccctttcctggcaa
tatttcggatcgagcaccggcatccttcggttgtacccggccatacaatggcgcacggaa
ggtgataagcctgacctttacgactgcaggatgcgcagctggttcatcgagtcggcaaca
tgcagcaaagacatggtcattctcatcgacattagcggtagcatgcagggcatgggctac
tcgatcgcaaagacaaccgcagtggaaattttggggacgctgtcgaacaacgacttcgtg
acgataatcgcctacacgaacgaaacaaccgaggtggtgccctgcttcaatggtaccttg
gtacaagcaacccctgagaatatagcggtgttcaaagatggattggagaaattaaacacc
acgaatccaacgattctcagcaaagccttcaacaaggcttttgacctcttggaaacgttc
cgaacgtccaagcagtgtaacgcatcaaatccatgcacccaggccatcatgcttcttacc
gatggtgtgcccggagacgttgcggaggtatttgccgagcgaaacaggctggaaaacgga
acatacatgcccgtccgtgtttttacgtatctacttggccgtgacgttacgaagacacca
gaaattcagtcgatggcttgctcgaacagaggctactactctcacgtccacaccctgtca
gaggtccgtgaacaagtcctcaaatacatcaatgtcatagcgagaccgctcgtactccag
aaggatatccatccgctcagttggactcatgcctacgcggacatctcgaatccggcacta
gctacgtggctggggctggtaatggagcaccctgagcaaaagtcgaggctcatcacgcat
ctgaaaggaaaggaacaaggcgtgcaaataaacgaggatgccatctacattcagaagcct
aatgcggaggactctaactcgtccaccgcactgaagacggcttatcaggagtaccggctg
ttaacatccgtcagtgtcccagcgttcgaccggaagggtaaccggaacaacgaaacgaaa
cttgccaacctcttgggggtcgccgggaccgatgttcccctggacgagataaacaggttg
acgcttccttacaaactcggcgtcaacgggtacgctttcatagtttccaacaacgggtac
gctattcttcatcctgatcttaggcctgcctacaagggaactctaaaattaaactacaac
agtatcgacctcacagaggtcgaagtgatcggtgaagatctgggacccagaatccccgga
gaggaggtgctgacgctgagagcagctctagtcaaccatagaaatggtactttgtcaaat
gtcacgataaagttccattacgacgactacaggagggtcaccttcgagaaacgaaactac
ttttacgaagccctaccaggaacacccttcggcctagccatagcacttccggaatatggt
accaaatggatcaatgttggcgaagagataaagaagaactggaatatgggtagaaaaatc
atggactatttccgcggtgaccgttggcgaattcatcccggctgggtctactgccgtttt
cactatcttgaaggacatgagttcgatcgacctgaagatgaggtgaaattctttcttgaa
tctcttgataatcccgatacctgggaatggcacgaacaatacgaaaccaagtcagactcc
aataatacgaacgagaaggtagagaataatgaggagagcaggatgaagcaggatgaactt
gaaccttcggccgatgaggacgatgagtcgactgtcgagactgaatacgcgactgatgat
ggcgactatatgtacccatacgacgaaaagatgtcagaaaatgaaaatgatacacaacct
tgcaaccggaagacgcttgacgacaacgcttattactgcaacaaggaattaatggaactt
cttgttttcgatgcgaaagcgacaaacgtcagtttcacaggaagatttatcttctcaaat
gaaacagaacggcaattggccgccatgtacggagtctttctgcgatttgtcgcaacccag
agtggactcacgcgatggcaagacgttggagactctcccgatgtagaaaatgattcatgg
ttttggaaccagggagaagaaaacattaaactcgagtttggcgacctccatcgacgagcg
gtaaatgaaccatggtataagggagccatttttcagcacaccgttgatcccgaaagtatc
tcggtgacagttccaactatccgaggggcagacgccgtcgtgactgtggcacaagcgata
ttccccaaagatggagcccaaaaagctcccgcggccgttatcggattccaaatgccgatg
gagtctttatacgcaaggtttcaggacctgactcaagaccacactgaatcaaacttttcc
tgtgctagtgcagtgatcgattgctacctgatagaccaaaacggctacgttgtagtttct
gacttgaacgaaactgggatattctttggcaccgttcagggtggtgttatgaagtccatg
atttaccaaggcgcgtacaagcccgtggtgttctacgattatcaagcgctttgttcctat
cctacgttcaagggtgccgctaatttcctcaagactccatttcaccacttggcgcaactc
tcgacctggctcattactcgcctgatgtggctaactttgcagatcgtcgagtttccggtg
gcttggagtaagaaagatatgaacgaagacgctccagcaccgcctcctccacccaaaagg
gttatcgaacattacgcttgtgacgaaaaacggaccctctacattttgcagccgaagctc
gcagaacatttgaccaacgtctccgattatccgtcgcgaccattttatgctgaaaaggtc
ccttttaccaacctcgtgcttgtcgtcgtcaatgtctcgtacccgtcatcttacgaacgc
attgaactacaccccacggagatacgtccggagttttactcgaatggaggccaagaattc
ccctgccacaaattgaatctcactcacctggagagacgtggacttgaaggatgttacgcg
gaagatcctggagaggatgaaattaaagactgtggcgcttga
DBGET
integrated database retrieval system
