KEGG   Neodiprion lecontei (redheaded pine sawfly): 107224977
Entry
107224977         CDS       T09006                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1 isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03030  DNA replication
nlo03410  Base excision repair
nlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107224977
   03410 Base excision repair
    107224977
   03420 Nucleotide excision repair
    107224977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nlo03032]
    107224977
   03400 DNA repair and recombination proteins [BR:nlo03400]
    107224977
Enzymes [BR:nlo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107224977
DNA replication proteins [BR:nlo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107224977
DNA repair and recombination proteins [BR:nlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107224977
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N DUF5853
Other DBs
NCBI-GeneID: 107224977
NCBI-ProteinID: XP_015520750
UniProt: A0A6J0C2L8
LinkDB
Position
4:complement(6525017..6533716)
AA seq 2266 aa
MFIQNKNKFRTPKAPFNTNQQFGQEPNVPREDSAEGRLRQSIENDRIDELYGFVRVNDSK
ERTGFLLNMHSTEVIEDDKRLVSAVDYYFMEEDGTRFKISLPYNPYFYVLCKKDTLQEVA
TFLQKKYPGFLAKVYPLTKEDLDLPNHLIGLKQKYLKLTFTNMTDLVKVRREIMSAVKKN
KEREKSHTYYTEMLASSLNVRDHNPVKNLTDHMDNILDIREYDVPFHVRVSIDVKVFVGK
WYTVKSRHTEPPIIICRDDIIERPDPIVLAYDIETTKLPLKFPDVNTDQIMMISYMIDGQ
GYLITNREIISKDIESFEYTPKPEFEGFFTIYNEPNEEAVIRKFFAHINDVKPHIFVTYN
GDFFDWPFVETRAAIHNIDMKKKIGFSKNRDGVYTCRPAMHMDCLCWVKRDSYLPVGSQN
LKAVAKAKLRYDPVELDPEEMCRMACEQPHVLANYSVSDAVATYYLYLKYVHPFIFALCT
IIPMEPDEVLRKGSGTLCESLLMVEAFHANIIFPNKQETQLNKLTADGHVLDQETYVGGH
VEALESGVFRADIPCRFKMVPEAFNKLIDGVEKALKHTIEEEEKISLEKVTNFDEVVEKV
KVKLRALRDQPLRMENPVIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDYNKLNAVC
QRNMTWMWRGEHTPASLSEFQRIQQQLEIEKFPPLFPGGPQRAFHQLSKEDQAMYEKKRL
TEYCRKAYKKTKITRMEERTQTVCQKENSFYVDTVRAFRDRRYEYKALTKVSKQQVSAAV
AKGDAGEIKSAKNREILYDSLQLAHKCILNSFYGYVMRKGSRWYSMEMGGIVCYTGAHII
KKAREIIEQVGRPLELDTDGIWCVLPASFPDNEIITTTDQKKSKITISYPNAVLNFMVKE
EFTNHAYHDLVDSENLVYEVRSENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNFDG
SLAELKGFEVKRRGELQLVKIFQSSVFESFLKGDTLEKCYASVAKIADHWLEVLYTKGAN
MPDTELFDLISENRSMSRKLEEYGAQKSTSISTAKRLAEFLGDQMVKDAGLACKFIISRK
PEGAPVTERAIPLAIFQSDPNVKRYYLRKWLKDPSIQNADIRDVLDWNYYIERLGSTIQK
IITIPAAMQGVANPVSRVKHPDWLHKKMLEKDDVLKQRRINEMFVIQPKKVATPDSDDES
DSHDENEIRDIEDIAGGSDVFKKPVAMVNKRKRAALQDEHENNLNKSWKEVLGLPPPLGN
TIEEKQVWIQYQKKKWAYQANQRNDRRKSKRSKVTEEISPPASYAGVVRNANTSTMGGFL
RRAQRALFDTPWQIIEIAETTEPGLFRLWALVGQELQQLRLIVPRIFYVNSRKVRPDPTV
EDLWRKCSRILPRSRIVYNLYQYSVPESNYKKHGPELMADLSCPNIEGIYETQMPLQFRA
ILQLGCICVVDRSAAADIKTGTDTFHLNQLQFKSIATQPYLERKQVLKHIFLYHHWSAVG
QKAMWGLFLAPTKRAYIFVLDSVRTNQMPNMNTLYVSERNNLLNSDIQNYVKSLPDEIQF
NVRVETDLKQVQRLVQSALQAYKNEKKGPTLLAIQSPIDISVLSRQMPVLTEFPMVNTHI
QDMENLYSTLDWQRVGAKAMIRHYLKSDQILDLMIQQCRYFHAPIGNLPADPTIFGADLF
YARHLQKHNFVLWCSPTERPDLGGSENDDNRLLTDFEESSSCAANNAGTYSSTCVELDVE
SLAVNTLLQCHRVNDIEGTSTFVAFDNMPQASLQEIVSGGAGITAIPSYDETALCSAAFK
VLKTMVNSWLRDISEYRNVFADYQVIHFYRWLRSPSALLYDPALRRTLHNLMKKLFIQLV
AEFRRLGSIIIFANFNKIILCSKKRLISDALGYVEFVVKSIKNKELFHSIEITYQQCWEY
LIWLDLPNHAGVKGKIPDELRGNQYVPDTEPDEEDDDDGPEIIMNWNLIEYLPEEAACQA
SFNAIVAGYISAVYQHMSESESSDATPRRRKRKNSSLSQTLTAPLGLGALESTAEFAKKI
ISSEMSHKLFQIVQKIHKKLPEKILTREENPYLDFGDAESKKINPALELVKSICKVLSLD
KEVEAEVHILKRNLLRLIGVGNFGDSAEWSDPCVSFTLPEVICKACYHTRDIDLCKDNDR
AFENNRHVWKCPLCETSYDNAEIEFSLIDTLNRKCMGYILQDLQCVKCNQIKRENMNEYC
TCAGQYRTLISKRELVRFAKTAKSIAIKFGMPILAETVQNTHLITS
NT seq 6801 nt   +upstreamnt  +downstreamnt
atgtttattcaaaataaaaacaagtttcgcacacccaaagcgcctttcaacaccaaccaa
cagttcggtcaagaaccaaacgtaccgagagaggattcagcagagggccgtttacgacag
tcgatagaaaatgatagaatcgatgaattatatggctttgtcagagtcaacgatagtaag
gagcgcacaggttttctgctgaacatgcattctaccgaggtgatagaggatgataagcgt
ttagtaagtgcagtcgactattactttatggaagaggatgggacaagatttaaaatatcc
ctgccgtataatccttatttttacgtgctatgcaaaaaggatactttgcaagaagtggca
acttttttgcaaaaaaagtaccctggatttttggctaaagtttacccattgacaaaagaa
gacttggatctgccgaatcacctaattgggctgaaacagaagtacttgaaactaactttt
actaacatgactgaccttgtcaaagtacggcgtgaaataatgtctgctgttaaaaagaat
aaggaacgtgaaaagagccacacatattacacagaaatgttggctagttcattgaatgta
cgtgaccacaaccctgtaaagaatttaaccgaccatatggataacattcttgatattcgt
gagtacgatgtaccttttcacgtaagggtatccatagatgttaaagtgtttgttggaaaa
tggtatacagtaaaatcacgccatactgaaccacctatcatcatatgtagggatgatatt
atcgaaagaccagaccctatagtcttggcatacgatattgagacaactaaattaccttta
aagtttcccgatgtcaatacagatcaaataatgatgatttcgtacatgattgatggtcag
ggatacttgattacgaacagagaaatcatatcgaaagatatagagagctttgagtatact
ccaaaaccagaatttgaaggattttttaccatttataacgagccaaatgaagaggctgtt
atcagaaagttttttgctcacatcaacgatgtcaaaccccatatttttgtcacatataac
ggagacttcttcgattggccttttgttgaaaccagagcagccatacataatatagacatg
aaaaaaaaaattggtttctctaaaaatagagatggagtttatacttgtcgcccagctatg
catatggattgtttatgttgggtaaagagagattcgtaccttcctgtgggatcacaaaac
ttgaaagctgtagctaaagcaaagttgagatatgatccggttgagttggaccctgaagaa
atgtgtagaatggcgtgtgagcagccacacgttctcgccaattattcagtgtcagatgct
gtcgccacttactacctttatttgaaatacgtgcatccttttatctttgcattgtgtact
attatcccaatggaaccagatgaggtcctgaggaaaggatctgggacactttgcgaatcg
ctccttatggttgaagcatttcatgccaatattatatttccaaataagcaagaaacacag
ttgaataaactaacagcagacggacacgtcttggatcaagagacctacgtaggaggtcac
gtcgaagctcttgaatctggtgtatttagagctgacattccatgtcggtttaaaatggtc
ccagaagcgtttaacaaactgattgacggcgtggaaaaagctctgaaacatactatagaa
gaagaagaaaagatatccctagagaaagttacgaattttgacgaagttgtcgagaaggtt
aaagtcaaattgagagcactcagggatcagcctctgagaatggagaatccggtgatctat
cacttggacgttggagccatgtatccaaacataattttaaccaatcgtctacagccatcg
gcaatggttgatgaaactgtttgcgctgcctgtgattacaataaattgaatgctgtttgt
caaagaaatatgacatggatgtggagaggagaacacacgccagcaagtttgagcgagttt
caaagaatacagcaacaattggaaatagagaaatttccaccactgttccccggtggacct
caaagggcttttcatcaactttctaaagaagatcaggcaatgtacgagaagaaacggctg
actgaatattgccgaaaagcttacaagaaaactaagataacgaggatggaagaaaggaca
caaacagtatgtcagaaagagaattctttctacgtggatacagtcagggcgttcagagac
agacgatacgaatataaggctctgacgaaagtttcaaagcaacaagtctccgctgctgta
gctaagggcgatgctggtgaaattaagtctgctaaaaaccgggaaattttgtacgactct
ttacagcttgctcataaatgtatattgaattctttctatggatacgttatgcgaaaagga
tctcgatggtatagtatggaaatgggtggtatcgtatgttatactggggctcatataatt
aagaaagctagagagataattgaacaagtaggacgccccttggagctggatactgatggt
atttggtgcgttttacctgcttcttttcctgacaatgaaatcatcacaacaacggatcaa
aaaaaatcaaaaatcacaatatcatacccgaatgcagtgctcaatttcatggtcaaggag
gaatttactaatcatgcttatcacgatttggttgactcagaaaatttggtgtatgaggtc
cgaagtgaaaattcgatattcttcgaagttgatggtccttacttagcaatggttttgcca
gcttcaaaggaggaaggaaaaaagctcaagaaacgttacgctgttttcaactttgacggt
tcgctggctgaattgaaaggttttgaagtaaaacgacgaggggagcttcagttggtcaaa
atatttcagtcctctgtatttgaatcgtttctaaaaggtgacaccttggagaaatgttac
gcttcggtggctaaaattgctgatcactggctcgaagttctttataccaagggtgcgaat
atgcctgatacagagttgtttgatctaatttcggaaaatagatctatgtcgcgtaaacta
gaggaatacggtgcacagaaatcaacttcaatttcgacagctaaacgattagctgaattc
ttaggtgatcagatggtcaaggatgcaggtcttgcctgcaaatttatcatatcaagaaaa
cctgagggtgcacctgttacagaaagagccattccgttagccattttccaatctgatcct
aatgttaaaaggtattatttgcgaaagtggcttaaggacccatcgattcaaaatgcagac
ataagagatgtgttagactggaattactacattgaaagattgggaagtacgattcaaaag
atcatcacaatacctgcagcaatgcaaggggttgcaaatcccgtttcaagagtaaagcat
cctgactggttgcacaagaagatgctggaaaaggatgacgttcttaaacagagacgtatc
aatgaaatgtttgttatacaaccaaagaaagtcgctactcctgattccgacgatgaatca
gacagtcatgatgaaaatgagattagagacatagaagatatagcaggtggttcagatgtt
ttcaagaagccagtggcgatggtgaataagagaaagagagctgctttgcaagatgaacat
gaaaataatctaaataagagctggaaagaagtcctcggcttacctcctccgttgggaaac
acgatagaagaaaagcaggtctggattcagtatcagaaaaagaaatgggcttatcaggcg
aatcagaggaacgatcgtcggaagtcaaagagaagtaaagtaacggaggaaatctctccg
ccagcaagttacgccggtgtggtaagaaatgctaatactagtacaatgggtgggttccta
cgtcgagcgcaaagggcattgttcgatactccctggcagataattgaaatagcagaaacg
actgaacctggtttgttcaggttgtgggctttagtgggtcaagagctgcaacaactgcgg
ttgatagttcctcgcatattttatgtaaactctcgcaaagtcagaccggatccgactgtg
gaagacctgtggaggaagtgttcaaggatactacctcgttctcgaatcgtatacaatttg
tatcagtactctgtaccggaaagtaactataagaaacacggtccggaacttatggcagat
ctatcatgccccaacatagaaggaatttatgaaactcaaatgccgttacagtttagagct
atattgcaactgggatgtatttgcgtcgtcgatcgatcagcggcagctgacataaagacc
ggaacggatacttttcatcttaatcaactgcagttcaaaagcattgccacccaaccgtat
ctcgagcgaaaacaagtactgaaacatatatttttgtaccatcactggtctgctgtcggt
cagaaagcaatgtggggtctttttctagctccgactaaaagggcttacatctttgttctt
gactccgttaggacaaatcaaatgccaaatatgaacacgttgtatgtctctgaaagaaat
aacttactgaatagcgatatacagaactatgtcaagagtttacccgacgagatccagttc
aatgtcagggtcgaaacggacttgaaacaggttcagcgtttggtacaaagcgcgctccag
gcctataaaaacgagaagaaagggccaacattactcgcgattcaatcaccaatcgatatt
tccgtattgtcacggcaaatgccggtcttgactgaattcccaatggttaatacgcacata
caagatatggaaaatttgtacagtactttggactggcaaagagtaggtgcgaaagccatg
attcgccactatctgaagtcggaccaaattcttgacctcatgattcaacagtgccgttac
tttcatgctccaattggcaatctaccggcggatccaacaatatttggtgcagacttattt
tatgccagacacttgcagaaacacaatttcgttttatggtgttcacctactgaaaggccc
gatttaggaggtagcgaaaatgatgataataggttgttaactgattttgaggaaagctcg
agttgcgcggccaacaatgcaggcacttattccagtacttgcgtagagctggatgttgaa
agtttggcagtaaatacactgctccaatgtcatcgtgtcaacgatatagaaggaaccagc
acgtttgtcgcctttgacaatatgcctcaagcttccctgcaggaaatagtctccggagga
gccggaataacggcaattccaagttacgatgagaccgctctttgcagtgcagcattcaag
gttcttaagacgatggtaaattcctggttgcgagacatatcagagtaccgaaacgtgttt
gctgattatcaggtgattcacttctatcgttggctcaggtcacctagtgcgttactatac
gatccggcgctgcgcaggacactccataacttgatgaaaaaattgttcattcaacttgtc
gcggagttcagaaggctcggctcgatcatcatatttgctaactttaataaaatcatttta
tgctcaaaaaagaggctgatatcggatgctctcgggtatgttgaattcgttgtaaagtcc
attaagaataaggaactgtttcacagcatcgaaataacttaccaacagtgttgggagtat
ctgatttggctagatttaccaaatcacgctggcgtgaaggggaagattccggacgagttg
aggggtaaccagtatgttcctgacacagagccggatgaagaggatgacgatgatgggcca
gagataataatgaattggaatctcattgagtatttaccagaagaggcggcgtgccaggca
agcttcaacgcgatcgtagctggatacataagtgcagtttatcagcacatgagtgaaagc
gaatcatccgatgcgacgccaagacgtagaaaaaggaaaaacagcagccttagtcaaacg
ttaactgcaccgcttggacttggagctcttgagagcacagccgagtttgccaagaaaata
atatccagtgaaatgtcgcacaaactgtttcaaatagtgcaaaagattcacaagaaactg
ccggagaagattttaacacgtgaggagaatccctatcttgatttcggcgatgccgaatca
aagaaaattaatccagctctcgaactggtcaaatctatatgcaaggttttatccttggac
aaagaagtcgaagcagaagtacatattttaaaaagaaatttattgcgtttaataggagta
gggaatttcggtgacagtgcggaatggagcgatccctgtgtgtccttcactttgcccgaa
gtgatatgcaaagcttgctatcacactcgtgatatcgatttatgcaaggataacgatcgc
gcgttcgagaataataggcacgtgtggaaatgtccgctctgtgaaaccagctatgataat
gcggagattgaattttcgcttatagatacgctaaacagaaagtgtatgggatatatactg
caagacttacaatgtgtgaaatgtaatcaaataaaaagagaaaacatgaatgaatattgc
acctgcgcagggcagtacagaactctcatttcgaaacgtgagcttgtaagattcgcaaag
acggccaaatcaatagctattaaatttggaatgcctattctcgcagagactgttcaaaac
actcatctaataacaagttga

DBGET integrated database retrieval system