Neodiprion lecontei (redheaded pine sawfly): 107225159
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Entry
107225159 CDS
T09006
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 2 isoform X2
KO
K22868
WD repeat-containing protein 34
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nlo03037
]
107225159
Cilium and associated proteins [BR:
nlo03037
]
Primary cilia and associated proteins
Dynein and associated proteins
107225159
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WD40
WDR55
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
107225159
NCBI-ProteinID:
XP_015521012
UniProt:
A0A6J0C3A4
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Position
5:26272634..26275558
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AA seq
470 aa
AA seq
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MFSDESFPPVGFSSQASLDKSQSTANVQTEEIHCQESKNQVFEPKDVETQTVCQDKTSPQ
VDYQKLAAFLKRVTPSVLDELDEIYGSTAFDGYDVASSGEPSTSVKLLTKFHTLNEADAE
AKISCVTWSAGGGSLALSYSTVCHDTWCNHTSSIRIFNFTKEDQFPSTPNRSLEVNSCVT
ALSYHPVEPSILAAGLFNGDVLVWNLRDDKSSALLQLSAHVDTLSMIQWRPTLVNGVFPL
VTAGRDGYLLVHKLTANFTNVDLYKRFKISKEHNPSEKTRPRSASGKKERAVEPGLCITA
FNFSTIDQTTFVLGTLCGGLYRCNIDQGTPVEGSRDTTDPVVDEFERHQGSITSIILSKT
CDTFVTSGTDKEIRIYRLSQFNSLHVIGVEDTVTGLSWVMGNWNIFTAYGAGQIITFYNL
ENEKNLPKMLLKTNGRETNCLQFNTKRELVAIGVSDGDLEIWKIPQNMVY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgacgagtcttttccaccagttggattttcctcgcaagcatcacttgataaa
tcacaaagtaccgccaatgttcagacagaggaaattcattgccaggagagtaagaatcaa
gttttcgagccaaaggatgtggagacccaaactgtttgccaagacaagacatcaccacag
gtcgattaccagaaactggcagcatttctgaaacgtgttacaccttcggtattggatgaa
ctcgacgagatttatggcagcactgcttttgatgggtatgatgttgccagtagtggagaa
ccgtctaccagcgttaagctacttacaaagtttcataccctcaatgaagcggatgccgag
gccaaaataagctgtgttacttggagtgccggtggtggatctttagctttgtcatacagt
acagtatgtcacgacacgtggtgtaaccatacatcaagtatcagaattttcaattttacg
aaggaagatcagtttccatcaacaccaaacagaagcttggaagtaaactcatgtgtcact
gcattatcctatcaccctgtggaaccctccattctagcagcaggtttatttaatggagat
gtcctagtctggaatttgagagatgataagtcttcagccctgctccaattatctgctcat
gtagacaccttgtctatgattcaatggcgtcctacactagtcaacggtgtatttcctctg
gttacagctggtagagatggatatttactcgtccacaaactgactgccaattttaccaat
gttgatttatacaaaaggtttaaaattagtaaagaacataatccttcagaaaagacaagg
ccacgaagcgcgagtggtaaaaaagaaagagcagtagaacctggattatgtataacagct
ttcaatttctctacaattgatcaaactacctttgttcttggaactttatgtgggggcttg
taccggtgtaatattgatcagggtactccagtagaaggcagcagagatacaacggaccca
gtagtggatgagtttgaaagacaccaaggtagcatcacatccataattttatcgaaaact
tgcgatacttttgtgacaagtggcaccgacaaggaaatacgtatttatcgattatcacag
tttaattccctgcatgtaataggggtagaagataccgtgacaggtctatcatgggtgatg
gggaactggaacatttttacagcgtatggggctggtcaaataataacgttttacaatttg
gaaaatgaaaaaaacctgcccaaaatgttgttgaaaacgaacggcagagagacgaattgt
ctgcaattcaacaccaaaagagaattagtagctataggcgtcagtgacggagatctggaa
atatggaaaataccacaaaacatggtgtactaa
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