Neodiprion lecontei (redheaded pine sawfly): 107225218
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Entry
107225218 CDS
T09006
Name
(RefSeq) spectrin beta chain isoform X7
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04517
IgSF CAM signaling
nlo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107225218
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107225218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nlo04812
]
107225218
Cytoskeleton proteins [BR:
nlo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107225218
Intermediate filaments
Intermediate filament-binding proteins
107225218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CCDC162_middle
Motif
Other DBs
NCBI-GeneID:
107225218
NCBI-ProteinID:
XP_015521093
UniProt:
A0A6J0C3I4
LinkDB
All DBs
Position
6:complement(27097014..27124662)
Genome browser
AA seq
2403 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERESVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIHFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
HDYESLTSDLLRWIEGTIEALGDRRFANSLVGVQTQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIDRINARKDNVLRLWNYLLELLKARRVRLECSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEQGEDYRPC
DPTIIIERVQQLEDAYAELVRLAVERRARLEESRNLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELISQHHFGSDRIKERLQEILG
MWNHLLDLAAFRRKRLEEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIEQLHQQASQLGEHDSKSPKVLERLASIDSRYKELLELAKLRKQR
LLDALSLYKLFSESDGVEQWIGEKNRMLETMVPAKDIEDVEIMKHRYDGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAEGKREALNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLNALEKEAQSIEQ
EHPDEAAVIRERITQIHTMWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQTWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYQKMMDYGERLTSEAGDGDTQYMFLRE
RLNALKMGWEELHQMWANRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILTKDETPTNFE
QAENMIKRHEAFMTTLEANDDKINSVVQFAGRLVEEGHFAADKVKKKADAINDRRNANHE
KANQVMDKLKDQLQLQMFLQDREELVEWVQEKHITAQDETYRSAKTVHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQLKPELAEIIKPKVEELCDQFEELETTTKDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKARQVTELDKQ
AEHLQRTVPDEKMEEIKCKKEKVAQRFEQLKAPLTDRQRQLEKKKEAYQFRRDVEDEKLW
IAEKMPQATSSEYGNSLFNVHMLKKKNQSLRTEIENHEPRINSVCKNGQKLIDEGHEDSA
EFTQRISDLSDKWRELKDAVDNRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYADTIRQLGETARQLINDQHALSDQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHVTLLWERFK
EFARDTETIGSERVAAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
AASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHGNFIQDLFTLQSQVT
QIQDESSKLQASYAGDKAREITNREAEVVAAWNNLQSLCEGRKAKLEDTGDLFRFFNMVR
TLLIWMDDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNLTACLDLGKDLLARN
HYASVQIKEKLLALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDDVENLIKKHEAFEKSAAAQEERFSALQRLTTFELRELKRQEQEREEEERRE
QEEAAAAEAAKLAKATPATSPDEPPSDRVDGDGNQSGEQAGEEDGHVALRKPSTRSPQTQ
EKPKEVHVQKPARLSTPDVSTPPISPTSPKSQSSYPTTPTTPKGGSGSESGTLRRKERSR
SKSPFRSFRWKKSTKSPSLDRSGVSDDDHSYTEQRSPGDDEFEGTLTRKHEWESTTKKAT
NRSWDKLYMVVRGQNLVAYKDQKSYKAAADQPYKGEPPLDLRGASVQVASEYTKKKHVFR
VKSQSGADFLFQAKDDAEMLEWVSVLNQAAQGVSGASTSRAHTLPAPTQAETKRRSFFTL
KKN
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtgcgcgggggttgggacccgacgcttcaacaggagatt
gtcgacgagtacgaatacgatggaggaaattccagttcgagactttttgaacgatcccgt
atcaaggctttagctggtgaacgtgaatcggtacagaagaaaacatttcaaaaatgggtg
aattcccatctggtacgatgttcttgtcgtatcggagatctctatgtcgatcttcgcgat
ggaaaaatgcttataaagctgctggaaatattgtcgggcgaacgtttgccacgtcctaca
aaaggaaaaatgcgtatccattgtttggagaatgtagataaggcactgcaatttttgcga
gagcaaagagtccatcttgaaaacatgggatcacacgacatcgtcgatggaaatccaaga
ttaagcttgggattaatttggacaatcattctacgtttccaaattcaagacatcaccata
gaagaaactgataaccaggaaactaaatcagccaaggatgctttgcttttgtggtgtcaa
atgaagactgctggatatcacaatgtaaatgttaggaacttcacaacatcttggcgagac
ggtcttgcgttcaatgccataatacacaaacatcgtccagatttgatccactttgacaag
ctatcgaaatcaaacgcgatctacaatttaaacaatgctttcaatgtcgcagaggataaa
ttaggtctaacaaaattgttagacgcagaggatatttttgttgatcatcctgacgaaaag
tctataataacttatgttgtgacctactatcactacttctcgaaaatgaagcaggagacc
gttcaaggtaaacgaattggtaaagttgtcggaattgccatggagaacgatagaatgatt
cacgattatgaaagtttgacaagtgatttacttagatggatcgaaggaacaattgaagct
ttgggtgatcgtcgttttgctaattctcttgtgggcgttcagactcaactttcacagttt
tccaactaccgtacagtagaaaaaccacctaaatttgtagaaaagggtaacttggaggtg
ctactgtttacactgcaatccaaaatgcgtgccaacaatcagaaaccctacacacccaag
gaaggtaaaatgatttccgatatcaacaaagcctgggagagattagaaaaagctgaacac
gagcgtgaattggcgctcagagaagaattgatacgtcaagaaaaattggagcaattggct
gcaagatttaaccgaaaagccagcatgagagaaacttggctatctgaaaatcaacgactt
gtatcgcaagacaactttggcttcgatttagcagccgtagaagctgcagctaagaaacac
gaggctatagaaactgatatattcgcttacgaagaacgtgtgcaggcagttatggctgtg
tctcaagagttagaggctgaaaactaccacgatatagaccggatcaatgcccgaaaggac
aatgttctaagattgtggaactaccttctggaattactgaaagcacgaagagtgcggttg
gaatgttcacttcaattacaacagaacttccaagaaatgttgtacattttagacagtatg
gaagaaattaagatgcgattgttaactgatgattatggtaaacatttgatgggcgttgaa
gatcttcttcaaaagcattcacttgttgaggccgacatcaatgtcttaggtgagagagtt
aaggctgtcgtacaacaaagccaaagattcttagaacaaggagaagattatcgtccttgc
gatccaaccattattattgaacgagtgcaacaacttgaagatgcttacgctgaattggtc
cgcctggctgttgagcgtcgagcacggcttgaagaatctcgtaatctttggcaattctat
tgggatatggctgacgaagagaattggatcaaggagaaagagcagattgtttctacgggt
gatatcggtcatgacttaactaccattaatttacttttgtccaaacacaaggccttggag
aacgaaatccaatctcacgaaccacaattgatgtcagttgctgcagtgggtgatgaattg
attagtcaacaccatttcggttctgatcgcattaaggaaagattacaagaaatattaggc
atgtggaatcacctgttagacttggcggcgttcagacgcaagcggttagaagaagctgtt
gattatcatcaattatttgctgatgccgatgatatcgatatttggatgctcgatactctg
cgattggtatcgtctgaggatgtcggtcgcgatgaagcaaatgtgcaatctttgctgaaa
aaacataaagatgtcactgatgaactgaaaaattacgctacaaccattgaacagctgcat
caacaagcatcgcaacttggagaacacgattctaagtctccaaaggtattagaaagactc
gcctcaattgattcgagatacaaagagcttctggaactggctaaattgcgcaagcaaaga
ttattagatgccttgtctctgtacaagctgttcagcgaatcggatggagttgaacaatgg
atcggagaaaagaacagaatgttggaaactatggttcctgccaaggacattgaagatgtt
gagataatgaaacaccgctacgatggctttgagaaggaaatgaatgccaatgcttctcgc
gttgctgtagttaatcaattggctagacagctactacatgttgaacatccgaactcagag
cagattgttgcacgtcagaatgaattgaatcaaaagtgggccgagctaagagagaaggct
gaaggcaaacgcgaagcacttaactctgcacatggagtacaaaccttccatatcgaatgt
cgtgagaccgtatcttggatcgaagataagaaacgcatcttacagcaaaccgatagctta
gaaatggacttgactggtgtgatgacgctacaacgtcggcttagcggtatggagcgtgac
ttggcagccatacaggcgaaattgaatgcacttgaaaaagaagcgcaatcaattgagcag
gaacatcctgatgaggctgcagtcattcgtgaacgaatcacccaaattcataccatgtgg
gagcaattaactcagatgcttaaagaacgcgatgccaaactcgaagaagctggagattta
catagattcttgcgtgaccttgatcatttccagacttggcttaccaagacccaaacagat
gttgccagcgaagatacacccacaagccttgcagatgctgagaaactgttgacccagcat
cagaatattaaggaagagattgacaactacacggacgattatcagaagatgatggactat
ggcgagaggctaacaagtgaggctggagatggagatacacagtacatgttcttgagagaa
agattgaatgccctgaaaatgggctgggaagaactccaccaaatgtgggcaaatcgtcaa
aatctgttatcgaattcgttgaacttgcaggtctttgaccgtgatgctcgccaagctgaa
gttttgttgtctcagcaagaacatatccttaccaaagatgagactccgacgaactttgaa
caagcagaaaatatgataaaacgccacgaagcatttatgactacattggaagccaatgac
gataagatcaactcggtcgttcaatttgcgggcaggttagttgaggaaggccactttgcg
gcggacaaagtcaagaagaaggcagatgcaataaatgatcgaagaaacgccaatcacgaa
aaagctaatcaagtgatggacaaattgaaggatcaacttcagttgcagatgttcttacag
gatagagaggaactcgttgaatgggtacaggaaaaacacatcactgctcaagatgaaact
tatcgcagtgcaaaaacggttcatagcaaatggacgaggcaccaagcgtttgaagcagaa
attgctagcaataaagatcgtctgcaacaactgcaacaggctgctgatgagttgattcaa
ttgaagcctgaattggctgagatcataaagccgaaagttgaagaattatgtgaccaattt
gaagagctggaaacaacaacaaaagacaaaggagagagactattcgatgctaatcgtgaa
gtcctcatacatcagacttgcgatgatatcgactcgtggatgaatgaattggagaaacag
attgaaagtacagatactggatctgatcttgcctctgtcaatattttgatgcagaaacag
cagatgatagaaactcaaatggctgtgaaggctcgccaagttacagagctcgataaacag
gctgaacatttgcagagaacagtaccagacgagaagatggaagaaataaaatgcaagaag
gagaaagttgcgcaaagatttgaacagcttaaggcaccacttaccgatcgacagcgtcag
ctggagaagaaaaaagaagcgtaccaattcaggcgtgacgttgaggatgagaaattatgg
attgcagaaaaaatgccacaagctaccagttcggaatatggtaattccctcttcaatgtt
catatgttgaagaaaaagaatcaatctctccgtactgaaatcgaaaaccacgaaccaaga
attaattctgtatgtaaaaacggtcagaaattgattgacgagggacacgaagatagtgct
gaattcactcaacgtatctccgatctttcggataaatggcgcgaactgaaagatgcggtt
gacaacaggaataagcatttgttacaaaacgaaaaggcacaacaatacttcttcgacgcc
acggaggctgaatcgtggatgagcgaacaggaattatacatgatggttgaagatcgtggt
aaagacgagatatctgcgcaaaacctaatgaaaaaacacgagtctttggaacatgctgtc
gaagattatgccgataccatccgtcagctaggtgaaacagcaagacaattgataaacgat
cagcatgcattgagtgatcaaattgcagtcaaacaatcccaagttgacaagctatatgca
ggactaaaagatttggctggcgaacgccgtgccaagctagacgaagcccttcaattgttt
atgctaaaccgagaagttgatgatttggagcaatggatagctgagcgagaattagttgca
ggcagtcatgagttaggtcaagattacgatcatgttactttgctctgggaaagattcaag
gaatttgctcgtgacacagagacaataggatcggaaagagtcgcagctgtaaatggaatt
gcagattctttgattgcaacaggacattcggatgcagctacaattgcagaatggaaggat
ggcctgaacgaagtctggcaagatttgctagagcttattgaaacacgaactcaaatgtta
gcagctagtcgtgagctacataaatttttccatgactgcaaagatgttcttggaaggatc
ttggaaaaacaaaatgcaatgtctgatgaattgggccgcgacgctggctcagtttcggca
cttcaacgtaaacacggcaactttatccaagacttattcaccttacagtcgcaggtgaca
caaattcaagatgaatcgtctaaacttcaagctagctacgcaggggataaggctagagaa
atcacgaatagagaggccgaagtagtagcagcttggaataatttacaatctttgtgcgaa
ggacgtaaggcaaaattggaagacaccggcgatttgttcagattcttcaacatggttaga
acattactgatttggatggatgatgttgttaggcaaatgaacacttcagaaaagccccgt
gatgtatcaggtgtagaactacttatgaataatcatcaaagtttgaaagctgaaatcgac
accagggaagacaatcttactgcttgtcttgacctaggaaaagatctattggcaaggaat
cattacgctagcgtccaaattaaggaaaaactactagcattgactgatcacagaaatgca
ttgttgcaccgctgggaagaaagatgggagaatctgcagctaattcttgaagtttaccaa
tttgccagagatgcagctgtagcagaagcttggcttattgctcaggagccatatctcatg
agccaagaacttgggcatacaatcgacgacgtagaaaatctgatcaagaaacatgaagct
ttcgaaaaatcagctgcagcacaagaagaaagatttagtgctctacaacgactcacaacg
tttgagttgagagaacttaaacgacaagaacaagaaagagaagaagaagaaaggcgtgaa
caagaagaagctgctgcggcagaggctgcgaagttagctaaagcgacacctgccaccagt
cctgacgagccacccagtgacagagttgatggcgatggtaatcaaagcggggaacaagct
ggtgaagaggatggtcatgtggcactacgcaagccttcaactagatcgccacaaacccaa
gaaaaacccaaggaagtgcatgttcagaagcctgcacgactatcgacaccagatgtttca
acaccgccgatttctccaacatctccaaagtcccagtcgtcatatccaacaacaccgaca
actccgaagggtggcagtggttctgaatccggtactttgcggcgcaaggaacgaagccgt
agtaaatcaccatttagaagtttccgttggaaaaaatcaacaaagtcacctagcctggat
cgaagtggtgtgagcgatgatgatcatagttatactgaacaacggagtcctggcgatgac
gaatttgaaggaacgttaacgcgtaaacacgaatgggaaagcacaacaaaaaaagccacg
aatcgatcatgggacaaactatatatggtcgtacgtgggcaaaatttggtagcttacaaa
gatcaaaaatcctacaaagctgctgccgaccagccatacaaaggtgaaccacctctagat
cttagaggtgcctctgtacaggtcgccagtgaatacaccaagaagaaacatgtcttccga
gtcaagtctcagagcggagcagacttcctattccaagctaaggatgacgcagaaatgctt
gagtgggtatctgtgttaaatcaagctgcacagggtgtatctggcgcgagtacatctaga
gcacatactctgccagcaccgacgcaagctgaaaccaagcggcgtagtttcttcacactc
aagaaaaactaa
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integrated database retrieval system
