Neodiprion lecontei (redheaded pine sawfly): 107225256
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Entry
107225256 CDS
T09006
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107225256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107225256
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107225256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
DUF364
Motif
Other DBs
NCBI-GeneID:
107225256
NCBI-ProteinID:
XP_015521149
UniProt:
A0A6J0C428
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Position
2:41973280..41975902
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AA seq
223 aa
AA seq
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MQNQLETTEEEECVLRPMNCELNQLSRPDGSAMFMQGDTVVVAGVYGPIEAKLQKMMHDR
ATVETMFSPAKGPPCVDDRAKETVIRETCEAVLLTALHPGMAISINVQELQDSGGLLACA
INAACLALIISSISMKFTVAAVSCMIDRESGKLIVDPDSTQIQQARVTFTYVFEGIKKDL
VSCHTTGRFSENELMESLEKCRAASQNIFDFYRNIVEQYAIKL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccaattggaaactacggaggaagaggagtgcgttttgagaccgatgaactgt
gaattaaatcagctgagcagaccggatggttcggcaatgtttatgcaaggtgacaccgtc
gttgttgccggagtttatggaccaattgaagcgaagctacaaaagatgatgcacgacaga
gcgaccgttgaaacaatgtttagtcctgcaaaaggaccaccgtgtgtcgacgacagagcg
aaggaaactgtcatcagggaaacgtgcgaggctgtactgctgactgcgttgcaccctggc
atggcaataagcataaatgtacaagaactgcaggattctggaggattactcgcctgtgcc
attaatgctgcttgcctggcgctcataatctccagtatttctatgaaattcactgtcgct
gctgtatcctgcatgattgaccgcgagtccggcaaactgattgtagatcctgatagcacg
caaatacagcaggcacgggtcacgttcacgtatgttttcgagggtataaaaaaggacttg
gtgtcttgccacacaactggtcgattctcggagaacgagctgatggaatctctagaaaag
tgtcgagcagcaagccagaacatcttcgatttttatagaaacatagttgaacaatacgcg
attaaattatga
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