Neodiprion lecontei (redheaded pine sawfly): 107225421
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Entry
107225421 CDS
T09006
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107225421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107225421
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107225421
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107225421
NCBI-ProteinID:
XP_015521371
UniProt:
A0A6J0C274
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Position
6:complement(2726697..2728582)
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AA seq
271 aa
AA seq
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MASQYKTIHPVKYLRDYLAQDIRPDGREFLRFRSASVNVGAISQADSSAIFKIGSTTVVC
GIKAELAAPKADTPNCGYLIPNVELSPLCSPKFRPGPPSDQAQVASKTIDDILINSSALD
LTDLCVCIDKLVWVLYCDLICIDYDGSVTDACLGALVAALKSLTLPEVQHNPETGAIVVD
TSDRKPFPLKSLPVSTTFAIFDEQLLLADPTDEEESLAKGKLCLVIDGPELCGLYKPGGI
PISQELLSKSLEKSKKRADLIRKVIEAAVTN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcaatataagactattcacccggtgaaatatctgcgagattaccttgcacaa
gacataagacccgatggtcgtgaatttcttcgattcaggtctgcaagtgtcaacgtagga
gctattagtcaggccgatagttcagccatattcaagatcggcagtacaactgttgtttgc
gggatcaaagctgaattagcagctccaaaagccgatactccaaattgcggatatttaata
cccaacgtcgaactctcaccactgtgttctccaaaatttcgtcctggaccacccagcgac
caggctcaggttgcttctaagacaatagatgacatcttaataaattcttctgccctggac
ttgacagatctatgtgtttgcattgataaactagtgtgggtgctttactgcgatttgatt
tgcattgattatgatggatcagttacagatgcatgccttggcgcacttgtagctgcactt
aaaagtttaactttaccagaagtccaacataatcctgaaacaggtgccatcgttgtagac
acttctgacagaaaaccatttcctctcaagtcacttcctgtatctaccacgtttgcaatt
tttgatgaacaacttctacttgctgatccaaccgatgaagaggaatctctggccaaaggg
aaactatgtctcgtaattgacggaccagaattatgtggcctttacaagcctggaggaatt
ccaatatctcaagaactattgtcaaaaagtttggaaaagtctaagaagagagcagatctt
atcagaaaagttatcgaggctgcagtgacaaactga
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