Neodiprion lecontei (redheaded pine sawfly): 107225460
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Entry
107225460 CDS
T09006
Name
(RefSeq) protein trachealess isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlo03000
]
107225460
Transcription factors [BR:
nlo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107225460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Med3
Motif
Other DBs
NCBI-GeneID:
107225460
NCBI-ProteinID:
XP_046593396
LinkDB
All DBs
Position
4:complement(30695455..30869719)
Genome browser
AA seq
999 aa
AA seq
DB search
MHRGGGGGNGPATAGPRGLDLEHPPMPGAAGFPWGAMLAGHHHHAAAAAAGMMQPPLSAA
GDYNPAGAHHGGAHPAMPMDLHVPQAFPYYRYRDDALCWTDRKPSMDDVGNPTSVNVRFE
ERHYAFESILELRKEKSRDAARSRRGKENHEFYELAKMLPLPAAITSQLDKASIIRLTIS
YLKLRDFSGHGDPPWSRDGPAPNKSIKGANRVRSPATLAMDMFEQHQGTHILQSLDGFAM
AVAADGRFLYISETVSIYLGLSQVEMTGSSVFDYVHQQDHSEVAEQLGLGLASSSSSSGP
HSSSSGLASPSSAASEEHGSSSTANPDVSSVMSLTASGLYKGYDRAFCVRMKSTLTKRGC
HFKSSGYRVVLLLCRLRPQYTFSHSRKSAPPLMGMVGLAIALPPPSVHEIRLETDMFVTR
INFDFRIAHCEPKVSELLDYSADELTGKNLYALCHGEDANRLRKSHVDLIHKGQVLTHYY
RLMNKSGGYTWLQTCATVVCNSKNAEEQNIICVNYVISGREYENLIMDCCQLEDGVTGVK
REDAAGNDPENGSPDADRGEGRSSGGPTNQQPDHPHRSPQEDGEDAPGSEGEPRGGRQHE
HAAQLQQEPQAVVGNVNAPAVKLRGHKRKIVPDEESSSGEEEDEDEMTGKAAGNGRSHAL
SPASSSHSVPGGDHALRPGSPKARRSDGSDGNADVPGASVKDLEQAMSKHLPGAPLGKPE
SPALHQPTDFSTDALLKQQQQRSTIQWIGAHHHHLSHLNPQQSATAPLPASALLRQLYAN
RESVIRANVHGITSTGTRAPSTGGGYYAGENPQNGPLPTPPGSEGSSTYGEHQFVLSAHN
QKTSATSSGADAFTSLVSSYSAAGGYAVDYHSAMTPPSSVSPRDKHPQQQQQQQQQQQQQ
QQQQQQQIHPGGVVGGYETSVYADPLLRHQYEPAQPLPLKPQVYSAAVHPSALDAAAVAY
ASAGLEQPQFYHHPAAGAGFHLYHPSNKAASSTWYSSAS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcggcggcggcggcggtaacggcccggctaccgccggtcctcgcggcctcgat
ctggaacatcccccgatgccgggggcggctggtttcccatggggggccatgctcgccggg
catcatcatcacgccgctgcggcggccgcaggcatgatgcagccgccgctatccgccgcc
ggtgactacaatccggccggtgctcatcacgggggtgcccaccccgcgatgccgatggac
cttcacgtaccccaggcgtttccctactacaggtatcgcgacgatgctctctgttggacg
gacaggaagccgtccatggacgacgtcggcaacccaacttccgtcaacgttcgatttgag
gagagacactacgcgttcgaaagcatcctcgagcttcggaaagagaagagcagagacgcg
gcgaggtcgaggcgaggaaaggaaaaccacgagttctacgagttggcaaaaatgctcccg
ctcccggcggccatcacctcccagctagacaaggcgtcgatcatcagactcacaatctcc
tacctcaaactccgagatttctcggggcacggggaccctccatggagccgggatggtcca
gcgcctaacaagtccatcaaaggtgccaaccgggtgaggtcacctgcaacactggcaatg
gacatgttcgagcagcatcagggtacacacatccttcagtcgctcgacggattcgcaatg
gcggtcgcagctgatggaaggtttctgtacatctcggagacagtctccatctacctcgga
ctttcccaggtggagatgactgggtcctcggtgttcgactacgtccatcagcaagaccat
tccgaggtcgccgaacagctcggcttgggcctcgcgtcatcctcgagttcctcgggccca
cattcctccagctctggtctcgcctctccgagtagcgctgcatccgaagagcacggttct
tcgtcgacagccaatcctgacgtatcctctgtgatgtcgttaacggccagcggtctctac
aagggttatgaccgggcattctgcgtgcggatgaaatccacgctgacgaaaagggggtgc
catttcaagtcctctgggtacagggtggtgttgctgctgtgcagactcaggcctcagtac
actttcagccactccaggaagtcggcaccaccgctgatgggcatggtaggtctcgccatc
gccctaccacctcccagtgtccacgagattcgacttgagactgacatgttcgtcactcgc
atcaactttgacttccggatagcccactgcgaaccaaaggtatcagaactcctggactat
tcggcggacgagttaacgggaaagaatttgtacgccttgtgccacggagaagacgcgaat
cgtcttcgaaagtcacacgtcgaccttattcacaaagggcaggtcctcactcactattat
cggttaatgaacaaaagtggaggctatacgtggctacagacgtgcgctaccgtggtgtgc
aactcgaagaacgccgaggagcagaacatcatttgcgtgaactacgtgatcagtggtcga
gagtacgaaaacctcatcatggattgctgccagctggaggatggcgtaactggcgtgaag
agggaagatgctgccggaaatgaccctgagaacggttcacccgacgctgacagaggagaa
ggacgcagcagcggagggccgacgaatcagcagcccgatcacccgcaccggtcgcctcag
gaggacggcgaagacgcgccaggatccgagggtgaaccgcgaggcggaaggcagcacgag
cacgcggcgcaactgcaacaggagccgcaagcggttgtgggtaacgtaaacgcaccggcg
gtgaagctgcgaggacacaagcggaaaatagtcccagacgaggagagcagctcgggcgag
gaggaggacgaggacgagatgacggggaaggctgcggggaacggaagaagccacgcgctg
agtccggcgtcctcgagtcactccgtgcccggtggagatcacgcgctgcgacccggaagt
cccaaagcgcgtcgctcggacggaagcgacggaaacgcggatgtcccgggagcctcggtg
aaggacctggagcaggcgatgtcgaaacatctgcccggggcgccgctcggcaagccggaa
tccccggctctccaccagccgacggacttcagcacggacgcgctgctcaagcagcagcag
caacgcagcaccatccagtggatcggggcccaccaccaccacctcagccacctgaaccct
cagcagtcggcgacggcgccgcttccggcctcggccctacttcggcagctctacgccaac
cgggagagcgtcatccgcgctaacgtccacggcataacgtcgacggggacgagagctcct
tcgacggggggcggctactacgccggggagaacccgcagaacggacctctgcccacaccc
ccgggatccgagggctcgtcgacctacggcgaacaccagttcgtactttccgcccacaac
cagaagacctcggcgacgtcgagcggcgccgacgcgttcaccagtctggtttcgtcctac
tcggcggcgggtggatacgccgtggattatcactcggcgatgacgccaccctcgtcggtt
tcgccgcgcgacaagcatcctcagcagcagcaacagcagcagcagcagcagcagcagcag
caacaacagcaacagcaacaaatccacccgggtggcgtcgtcggtggttacgagacctcg
gtttacgccgatccgctactcagacatcagtacgaacccgcccagccgttacccctgaag
cctcaggtttattcggccgcggtgcatcccagcgccctcgacgccgccgccgtcgcctac
gcctccgcaggactcgaacaaccgcagttttatcaccatccggccgcaggggccggattt
cacttgtatcatccatccaacaaggcggcatcgagcacctggtacagctcggcttcttag
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