Neodiprion lecontei (redheaded pine sawfly): 107225491
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Entry
107225491 CDS
T09006
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107225491
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
107225491
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
107225491
NCBI-ProteinID:
XP_015521462
UniProt:
A0A6J0C4K1
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Position
5:19009017..19030750
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AA seq
928 aa
AA seq
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MADSDDEYDRKRRDKFRGERTESYSREGRRGDDRRRDEWVDREWSSRPRARPEYREYRGG
GGGGGRERYSPARSQEMAPPMKRMRADWEDRPRYGGHDYYGGGTSWGPDHYTPAHHSNHH
YGNHSNNNSREVAGNFSNSNVETQPPMMSFKAFLGTQEDSITDEEAIKRYNEYKLEFRRQ
QLNEFFVAHKDEEWFKIKYHPEESVKRKDEQISALKKRVEVFLEMLRLGEIDKVSVDADQ
ADALLHLLDAVVIKLEGGNEEDLKVLDAKPPNPPTPKETTPAPKEKEVKEQKVDQEPEKE
PEKAEDDNKSEKPADADKQNENDEVNGDAEMEDEEKEEKTDESEKLAENSEVKEDEVQEV
QTPSEKEEKSEEPNSKKRKRSDSNSSSSSSSSSSSLSDSDSNKPDTPKTDAQPEEKSGAK
DEEEKIEIKDDEKAEESKDKEEGEEETSKDANEPETVIDLASEEKDREPRALHKTSSIFL
RNLAPTITKAEVEAMCKRFPGFLRVAIADPQPERRWFRRGWVSFERQVNIKEICWSLNNI
RLRDCELGAIVNRDLSRRIRTVNGLTSHKQIVRHDIKLSAKIVHNLDNRIGLWNEDKKDG
NASKEGVDGKDSRTSNEVEQAAFGLSSKNPVLKNITDYLIEEASAEEEELLGMSGDQEEG
QVGGDGDGPIERDPLLIKVLDRLVLYLRIVHSVDYYNHCEYPNEDEMPNRCGIMHVRGSP
PTAKVSATELSEYCRNFESKMSVFLTPMATTTSDEFDKLGAKNSEAEVEKFVQANTQELS
KDKWLCPLSGKKFKGPDFIRKHIFNKHGEKVAEVKAEAEYFNNYLKDPKRPQLSEHPGNK
APVREGPRDGFSPYGGAVRFGGYGGGYGGRGGGYGSGYGGGGGGFSGGFGMPRPNRGGFN
RGRGGGSDMRPVIHYRDLDAPREPDEFI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctgatgacgagtacgatagaaagaggagggacaaattcagaggcgaaaga
accgagtcatactccagagaaggaagacgtggcgatgatcgtcgccgagatgagtgggtt
gacagggaatggtcgagtcgtccaagagcgaggcccgagtaccgtgagtatcgaggtggc
gggggaggcggaggtcgagagcgatacagcccagctcgatcccaggaaatggctccgccg
atgaagcggatgcgggctgactgggaagaccgtccgcgttacgggggccacgattattat
ggtggcggaacttcctggggtccagatcattacacgccggcacaccatagcaaccatcac
tacggcaaccattcaaacaacaacagtcgcgaagttgccggaaacttcagtaattcgaat
gtggagacacagccaccgatgatgtcgttcaaggcgttccttggcacgcaagaagactca
attacagatgaggaagcgataaaacgctacaacgagtacaaactggagtttaggcggcag
caactcaacgaattttttgtcgctcacaaggacgaagagtggttcaagataaaataccac
cctgaagaatctgtcaagaggaaagatgaacaaatatctgcgctcaagaaacgtgtcgaa
gtgtttttggaaatgcttcggctaggcgaaatcgacaaagtctctgtcgatgctgatcaa
gcagacgctttgctacaccttttggatgcggtcgttattaaactggaaggcggaaacgaa
gaagacctcaaagttcttgacgccaaaccgcctaatcctcccactccgaaggaaacgact
cctgcacctaaggagaaggaagttaaagaacaaaaagttgaccaagagccggaaaaagag
ccagaaaaagcggaagatgataataaatctgagaaaccagcagatgctgataaacagaat
gaaaacgatgaggtgaacggtgacgctgaaatggaggatgaagaaaaagaggagaagaca
gatgagtcggagaaattagctgagaattctgaggtcaaggaagatgaggttcaagaggtt
caaactccgagtgaaaaagaggaaaaatccgaggaaccaaactccaagaagcgaaaacgt
tcagacagcaatagcagcagcagcagcagcagtagttcaagcagcctttctgacagcgac
agtaataaaccagacactccaaaaactgatgctcaaccggaagaaaaatctggggccaaa
gacgaagaagagaaaattgaaatcaaagatgacgagaaagctgaggaaagcaaagacaaa
gaagagggcgaggaggaaacaagcaaggatgccaacgaacctgaaactgttatagatttg
gctagcgaggagaaagacagagaaccaagagcactccacaaaactagtagcatatttctc
cggaatttagcaccaactattaccaaagctgaagtcgaggcgatgtgcaaacggtttcct
ggctttctgcgtgtcgctattgccgatcctcaacctgaaagacgctggttccgccgagga
tgggtgtctttcgagcggcaagtcaacataaaagagatctgctggagcctgaataatata
agacttcgagactgtgaactaggcgcaattgttaatcgggatctttctcggcgtattcga
acggtcaacggacttacttcgcacaaacaaatcgtcagacatgacataaaactcagtgcg
aaaatcgtccacaacttagacaacagaataggactttggaatgaggataaaaaagatggc
aatgcttcgaaagagggtgtcgatggcaaggacagcagaacctccaacgaagtagaacaa
gctgcttttggactctcttcgaaaaatccggtcttgaagaatataacggattatttgata
gaggaagcatccgccgaggaggaagaacttcttggtatgtccggagaccaagaagaagga
caagttggcggcgatggcgatggtcccatagaacgtgacccgctgcttataaaggttctg
gacagattggttctctacctgcgtatagtgcattctgtggattactacaaccactgtgaa
tatccgaacgaagacgagatgccgaacagatgcggcataatgcacgtcagaggatctccg
ccgaccgccaaagtatctgcgactgaactttccgagtattgtcgtaattttgagagcaag
atgtccgtatttctgacaccgatggcaacaactacctctgatgaattcgacaaacttggc
gctaaaaattccgaagctgaggtcgaaaaattcgtgcaagcgaacacgcaagagctttcg
aaagacaaatggctttgtcctttaagcgggaaaaaattcaaggggccggatttcatcaga
aagcatattttcaacaagcatggagagaaggtagcagaggtaaaagctgaggccgagtat
ttcaacaattatttgaaggatccaaagcgtcctcagctctctgaacatccaggtaacaaa
gcgcctgttagagaaggacctcgtgacggattttcaccttacggtggcgcagttagattt
gggggttacggtggaggttacggtggacgtggcggcggttatggttctggatatggcgga
ggcggtggaggatttagcggtggattcggaatgccgcgtcccaatcgtggaggattcaat
cgaggacgtggtggcggaagtgacatgaggccagtgattcactacagagatcttgatgcg
ccgagggaaccagatgaatttatataa
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