Neodiprion lecontei (redheaded pine sawfly): 107225707
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Entry
107225707 CDS
T09006
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107225707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlo02000
]
107225707
Transporters [BR:
nlo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107225707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
SMC_N
R1_ABCA1
DUF4162
AAA_23
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
107225707
NCBI-ProteinID:
XP_015521738
UniProt:
A0A6J0C5A1
LinkDB
All DBs
Position
1:36178882..36192197
Genome browser
AA seq
1670 aa
AA seq
DB search
MGISLLNNFCTRLKHSGFLIYKNIIVRKRHLIGTLIEILLPACIVATILAVRSNLDVEPI
HVRNSTYYEMRTSSEVVRDTSRSRVRLYYKPQTELTKNLMRNVTECMGILPSQLSGFNSE
EVMLHHYETQQATDSLVKVLAIDFDDMDDFSDPKKLIYTIRSSQKIPDKLLDVDIEGIST
ASDHLLDEIPVVGFQICLDNAFIESKARDGAIKPMVSLQKMPFPPYDKVNANELQIQNVI
CTIGGLIFLATIYLIPTYISAEKSTGVNTLLKINGIKSYQNFLSWIACGMVFSIIIVSSI
TTIVKLNFRSDQKPFYYHTDCCIIWLTLFINLTAIYAFCLHLATYFSKTWLAQLVATTVS
LIINITATQFENYDKSTFLPWIGFLCPTTATMRIFDELNRRENQRVGAQWSNVLETTHPA
LNYWGSLGFIMLSNFMGIVFHFILAVYLDAVLPSKYGINETPLFFIKYFKKNKVCSSSES
TRMLNPVLEPEIYEHVADNSLYPGVKLTQLVKRFIRGIIKRNTIKAVQGLSLEFYKGQIT
ALLGHNGAGKSTTFAVLTGLTSPSSGSVEINGKDITADIDGIRSDLGVCLQENTMFPDLT
VVEQLRIVGLLKQKDRTRKELMAEIDELLKKMDMEEKRDVMPDELSGGQKRRLCLAMALI
GNASTIFLDEPTSGMDPETQRGTWDTILKYRDQKTIIITTHSMEEADVLGDRIAIMDSGK
LKCYGSPMYLKKCYGHNHHEITLSTTSNYDIDKIRELVGSDASINVTQHGRIVINLPFTS
SLPEILDSMENQKAKLGITGLSVSIITLEQVFLRAADNEEIANKSEDNVDGKVAQDLRGY
EYLTGWDLTWQMIYALLAKKMTYFKANKGVSLALVCGTLIAILLPLVFNPADYGKKQNLR
IELRTYKSPEVMIHSGDETLGNMYKKIIENQGAKIDVTEAGVSLSKGLLSRALKDMTYYK
TRMIVSAEFNSSVSVNGLYSGGATLSAPIVLNTMSNLLLKIVAGDQYSIDASIGQLPRSL
VQDAQKRMENKVEMLMRNILFMAIFVHVVALFVIHPLLENSTRFKQLQQMAGVSPFTYWG
TMFLVDYGFYILVSLFAVFGIVCRDFFDHLSAVFFSECGGVLLLLFLLFGINALLLAYIH
SFMKKRFHVVYSILSGIPLLIVFIIVPLHEVLSYMDNVKWANVIQRRIFSLAPVISFVFG
CMKWEEIAFKNARCRAMPKLSTAIACDTNDYCCALKCSDGYCENPLPFLGDFSEQGGIKE
YIVYLLFTPIILVGILYLLEQQTFAKLRSKFQVTNHHSKRYSDETIDRKVEEEKRIVCQE
INNINRGSSEFNSEIKNVFLASGLSKHYGKVEAVKEVSFRVLRNECFGLLGVNGAGKSST
FRMLVGEEIPNSGILYRGRYSSNSDRTKYLAGMGYCPQTDALIPCLNAVEQLTLFARLRG
IPKHEVASEVYSWINKLQLTKHATKPSGDYSGGNKRRLNIAIALIANPELVLLDEPTTGV
DPAAKRLVWTVLQNCQASGQAIILTSHSMAECEVLCNRLVIMAKGQLVCVGASQELKERF
VAGFNITIKLDPRRTEHNCTRIKKKIETNFICRLIDEHPGYLFYHVTDPQATWVKMFGTM
NDIQSVHQCVEDFTVSTSTLEQLFMQFARPTDSTTQYHIQSETAAEESCV
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgggtatttcactgctaaacaatttttgcacaagactgaaacattcgggatttctcata
tacaaaaatatcatagttcgcaaacggcacttaattggaactcttattgagattttatta
ccggcatgcattgttgcgacaatccttgcagtcagatctaacttagatgtcgaacctata
catgttcgtaacagcacatactatgaaatgcgaacaagtagtgaggtggtacgggatacc
tcacgatctcgtgtccgtctgtattacaaaccacaaactgagctgacgaaaaatctcatg
agaaatgtgacagaatgtatgggcatattaccaagtcaactctctggcttcaattcggaa
gaagtcatgctgcaccattatgagacacagcaagcaacggattcattagttaaagtcctt
gcaattgattttgatgatatggatgacttctctgatccaaaaaaactgatctacactatt
cgatcatcacagaaaattccagataaattacttgatgttgatatcgaaggcataagtaca
gcatcggatcacttacttgacgagattcccgttgttggtttccagatttgtttggacaat
gcatttattgaaagtaaagctcgcgatggtgcaattaaaccaatggtttcactccaaaaa
atgccatttccaccatatgataaagttaatgccaatgaacttcaaatacagaatgtgatt
tgtacaattggtggacttattttccttgcaacaatctacctgataccaacatatatcagt
gcagaaaaatccactggtgtaaatactctactgaaaataaatggaataaaatcatatcaa
aattttctaagctggatagcatgtggcatggtttttagcatcatcattgtttcttcaatt
accacaattgtgaaattgaattttcgatctgaccaaaaaccgttttactatcacactgac
tgctgcataatttggctaacgcttttcatcaaccttactgcaatttatgccttctgtctc
cacctggctacgtacttctcaaaaacatggcttgcacaactagtggcaacaacggtgtct
ctaattataaacataactgcaacccagtttgaaaactatgataaatctacttttttacca
tggattggatttctttgcccaactacggctactatgaggatatttgatgagcttaatagg
cgtgaaaatcaacgtgttggagcacaatggagtaacgttcttgagacaacgcatccagca
ttgaattattggggtagtcttggcttcataatgttatcgaactttatgggaatagttttc
catttcatcctcgctgtatatctggatgctgtactaccgagcaaatatggtatcaatgag
actccgttattcttcatcaagtattttaagaagaacaaggtgtgcagctcttctgaaagt
acacgtatgcttaatccagttctagaaccagaaatatatgaacatgttgctgataatagc
ttgtatcctggggtaaaactgacacagttggtgaaacgatttatacgtggaattatcaaa
cgaaatacaatcaaagcagttcaaggactcagtttggaattttacaaggggcagatcact
gctttgctgggtcacaatggtgctggaaaaagtacaacatttgcagtcttgactggtttg
acatcaccctcatcgggaagtgtggaaattaatggcaaagatataactgcggatattgat
gggatcagaagtgatttgggcgtatgtcttcaagaaaataccatgttcccagatttaact
gtagtcgaacagctccgaatagttggtttgctgaagcaaaaagaccgaaccagaaaagag
ttgatggcagaaatcgacgaattattgaaaaagatggatatggaagagaaacgagatgtt
atgccagacgaactctccggtggtcagaaaagacgactatgcctagctatggcacttatt
ggcaatgcttctactatattcttagatgaaccaacatcgggtatggatccagaaacacag
agagggacatgggacactatattgaaataccgtgatcaaaaaacgattataattacgaca
cacagtatggaggaagctgacgttctgggtgatcgaattgcaatcatggattcaggaaaa
ctgaagtgttatggttcaccgatgtaccttaaaaaatgctatgggcacaatcatcatgaa
ataacgctgtcaacaacatcaaattacgacatagacaaaattcgagagctggttggtagc
gatgcatcgataaatgtgactcagcacggcagaattgttataaaccttccatttaccagc
tctttaccggaaattttggacagtatggaaaatcaaaaagcaaagttgggaattactggt
ctcagtgtgtcaataataactttggagcaagttttcttaagggctgccgataatgaagaa
atagcaaataagtcggaagataatgttgatgggaaagtagcacaagatttaagagggtac
gaatatttgacaggttgggaccttacttggcaaatgatttacgcgttgttagcaaagaaa
atgacctatttcaaagctaacaagggtgtgagtctagcactcgtgtgtggaactctgata
gcgatattattgccgcttgttttcaacccagctgattatgggaaaaaacaaaatttacgg
atcgagcttcgaacatataaaagtccagaagtgatgatacactccggagatgaaacttta
gggaatatgtataagaagataattgaaaaccagggtgctaaaatcgatgtcactgaagct
ggagtctctctgagcaaagggttactatccagagctctaaaagatatgacatactataaa
actcgaatgattgtctcagctgaatttaactcaagtgtgtcagtaaatggtttatattct
ggcggagcgacattaagtgctccaatagtcttgaataccatgtcaaatttactgttgaag
atagtggcgggcgatcaatattcaatcgatgcaagtatcggccaattgcctcgatcgtta
gtgcaagatgcacagaagagaatggagaataaagttgaaatgctaatgagaaacatttta
ttcatggcaatatttgttcacgttgttgctttgttcgtcatacatccgctacttgagaat
agcacaagatttaaacagttacagcagatggctggtgtttcgccttttacatactgggga
acaatgtttctggttgattatggattttatatattagtgtcattattcgccgtttttggt
attgtttgtagggattttttcgatcacttgtcagctgtatttttctcagaatgtggaggg
gttttacttctgttatttctgctttttggtatcaatgctttactcttggcttacatacat
agtttcatgaagaaacgattccatgttgtgtattcaattttgagtggaataccattatta
atagtatttatcattgttccactacatgaagtgttatcctacatggataatgttaaatgg
gcaaatgtaattcagcgcagaatattttctttggcacctgtcatcagttttgtttttgga
tgtatgaagtgggaagaaatagcattcaaaaatgcaaggtgccgagcaatgcctaaactt
tcaactgccattgcttgtgatactaatgactactgttgtgcactgaagtgttctgatgga
tattgcgaaaatccgttaccatttttgggtgattttagtgaacaaggcggaatcaaagag
tatattgtgtatttattattcaccccgattattctggtgggcatcctttatttactagag
cagcagacgtttgcaaaattgcgatcaaaattccaagtaacgaaccaccactcaaagcgt
tattctgatgaaacaatagacaggaaagtcgaagaagaaaaaagaatcgtatgccaagaa
attaataacattaacagagggtcatctgaatttaattctgagatcaagaatgtctttctg
gcatctggactgagcaaacattacggaaaagtggaagctgtcaaagaagttagtttcaga
gtattgaggaacgagtgtttcggattgttaggtgtgaatggtgctgggaaaagttctact
ttccgaatgttagttggtgaagaaattccgaatagtggtattctttaccgtggtcgctac
agcagtaattctgatcgaaccaagtatttggctggaatgggctattgtcctcaaactgat
gccttgattccatgtcttaatgcagtggaacagttgaccctttttgcccgtctgagaggc
atcccaaaacatgaggtggcgtcagaggtttactcgtggattaacaagctgcaattgacc
aaacatgcaacaaaaccaagtggggattatagtggtggaaataaacggcgcttaaatatt
gcaattgcactaattgcaaatcctgaactggttttgttggatgagccaacgactggtgtc
gatccagccgccaaaagattagtatggactgttcttcaaaattgccaagcatctggccaa
gccatcatacttacgtcccacagtatggcggaatgcgaagttctgtgtaatcgtttagtg
ataatggcgaaaggtcaactagtatgtgtcggagctagtcaggagttgaaagaacgtttt
gtagcaggcttcaatatcacaatcaaactggatccgcgacgaaccgaacacaattgcacg
agaattaagaaaaaaatagaaacgaatttcatctgtcgattaatagatgagcaccctgga
tacttattctaccatgtgactgacccgcaagcgacttgggtgaagatgtttgggacaatg
aacgatatccaatcggtacaccaatgtgtcgaagatttcactgtatctacgtctacgttg
gaacaactgtttatgcagtttgccaggcctacagactctacgacgcaatatcacatacaa
tcggaaactgcagccgaagaaagttgtgtctaa
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integrated database retrieval system
