Neodiprion lecontei (redheaded pine sawfly): 107225873
Help
Entry
107225873 CDS
T09006
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107225873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlo03041
]
107225873
03009 Ribosome biogenesis [BR:
nlo03009
]
107225873
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107225873
Spliceosome [BR:
nlo03041
]
Complex A
U1 snRNP components
U1 related factors
107225873
Complex B
107225873
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107225873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107225873
NCBI-ProteinID:
XP_015521954
EnsemblRapid:
ENSNLCG00000008518
UniProt:
A0A6J0C6H3
LinkDB
All DBs
Position
2:complement(31711587..31718325)
Genome browser
AA seq
611 aa
AA seq
DB search
MSFRDRDRGDRRGGSRGGSRFGGRDSGGGGRFGSGGGGGGRDTGRDNGFGGNSFKNKQPG
ERLRKPRWDMSSLQPFSKDFYQPHPNVLGRSLHMVEIYRSDKEITVKGSNIPGPNIYFEE
GGFPDYVLNEIRKQGFSQPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINN
QPRLQRNDGPVALVLAPTRELAQQIQQVAADFGSTSQVRNTCIFGGAPKGPQARDLERGV
EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMW
SATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKEGKLMKLLEEISN
EPENKTIIFVETKRKVDDITRAINRFGWQAIGIHGDKSQQERDYVLNQFRGSRSAILVAT
DVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKANDLIQ
VLEEAKQVVNPKLYELSRNPGVYKRGRFGGRSGGGSSGGRGGGGSRGSRGGRDGGDRGGR
FDRGSNTGDRSGKWSSGGGGSYGSKSFGHNSYTSNASGGGSYGHNNGSSSYSGGGGGGSG
SGSGYRHQNGY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgagacagggatcgtggagacagacgaggagggagcagaggagggagcaga
tttgggggtagagacagcggtgggggaggccgatttggaagcggtggaggaggtggagga
agagacacaggtcgggacaatggatttgggggtaattcattcaaaaacaagcagcccggt
gagcgcctgcgcaaaccgagatgggacatgagttccctgcagccgttcagcaaggacttt
taccagccacaccccaatgtcttgggaaggagtctgcacatggttgaaatatatcgttca
gataaagaaataaccgtaaaaggatccaacattccaggaccaaacatatatttcgaggag
ggtggcttccctgactatgttttaaacgaaattcgcaaacaaggcttcagccaacccact
gcaatccaagctcagggatggccaattgcactctccggccgcgacatggttggaatcgct
caaactggctcgggaaaaacacttgcctatatcctgcctgctattgtccacataaacaac
cagccacgtcttcagcgcaacgacggacctgtcgcactggttctagcaccgaccagggaa
cttgctcaacaaattcagcaggttgctgctgatttcggaagcacatctcaagtccgaaac
acttgcatatttggaggtgcgccaaaggggccgcaggccagagacctggaaagaggtgtt
gagatatgcattgcaactccggggagattgatagactttttggaaagagggactacgaat
ctccgcaggtgtacctatcttgtgctcgatgaagctgacaggatgcttgacatgggattt
gagccacagattaggaaaatcgtcgagcaaatcagacccgacagacagactctcatgtgg
tctgccacatggcccaaagaggtccgcaacctggccgaagagtttctgacagattacatt
cagattaatattgggtctcttcagctcgctgctaatcacaatatacttcaaatcgtcgac
gtttgtgaggagtacgaaaaggaaggaaagctcatgaagctccttgaagaaatttctaac
gaacctgaaaataagactattatctttgtcgaaactaagagaaaggttgacgacattaca
agagctatcaacaggtttggatggcaggcaatcggcattcacggtgataaaagtcaacaa
gaacgtgattatgttttaaatcaattccggggcagtaggtctgcaattttagtcgcaact
gacgtggcagctagaggcttagatgtcgaagatgtgaaatttgtgataaatctggactat
ccttcgaattctgaggactacgtacatcgcattggtcgcactggtcgttcccagagaact
ggtacagcatatgccttctttacacctggcaatgcgcataaggctaatgaccttatccaa
gtcctagaggaggcaaagcaggtcgtcaatccaaagctgtatgagctttcacgaaatccc
ggagtttataaaaggggaagattcggaggtcgtagcggaggtggtagttcgggaggtcgt
ggtggaggcggatcgcgaggttcgcgcggtggtcgcgacggtggagatagaggaggcaga
tttgatcgtggcagtaatacaggtgacagatcagggaaatggagtagtggaggaggtggg
agctacggcagtaagtcattcggtcataacagctataccagcaatgccagtgggggaggt
agctacggtcacaataacgggagcagcagttatagcggaggtggtggtggtggtagcgga
agtggtagtggttacaggcaccaaaacggttattaa
DBGET
integrated database retrieval system
