Neodiprion lecontei (redheaded pine sawfly): 107225964
Help
Entry
107225964 CDS
T09006
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
107225964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlo03000
]
107225964
Transcription factors [BR:
nlo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107225964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
HLH
PAS_3
PAS
PAS_9
bHLH_HIF1A
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
107225964
NCBI-ProteinID:
XP_046600940
UniProt:
A0ABM3GL34
LinkDB
All DBs
Position
7:7868372..7934628
Genome browser
AA seq
911 aa
AA seq
DB search
MQPPLPHGYGGELPADSGGVVEGGAQVDAEACVSQEAHPCPGSRKQQRNPRRQGEEREAQ
DQWQLPAEEDHGPPIHRRQEQPADMVAQEMAQGYTHLLHDGQEPQEFISLEELKPRLQDQ
DRHGRTQSHNEVRTVPASPNSALYHHSGQQRSYYNLTPVPKSSRSSVYFGGTDTGVEDLA
VPAGGVGPGGGGVPNPQGPMGAESGSRMKAEQGGAATASHHYRQASHQHHHHRHHHHQQS
QNQSPNHYNSDHCTPLHVQPFESPSSVDAGFAPTIRKRKISWNESGELQNDTGDDTKSIR
TNDDSKSEGSELQNDRGDDTKIVRMHDDSKRQNHSEIEKRRRDKMNTYITELSAMVPMCH
AMSRKLDKLTILRMVVQHVKTILGTAAPYTEGHYKPPFLSDQELKMLILQAAEGFVFVVG
CDRGRILYVSESVSQTLNYSQTTIATLLDTKRWFPQSDLMGQNWFDILHPKDVAKVKEQL
SSSNLSPRERLIDVKTMLPVKTDIPHDVSMLCPGARRSFFCRMKRKLENTRCGDPKVKEE
ADTTTGCHRRKKQQNNDCKYCVIQCTGYLKTWATAKIGLEEQEGEGDGEACNLSCLVAVG
RVQPPLPAFSAPRRPHLRTIQFVSRHAVDGIFLSVDQRVTLVLGFLPQELLGTNIYEYYH
RDDISHLAESHKAALQTREKVTTQVYRFRSKETTFVRMQSELKSFRNPWTKDVESLIAKN
SAIFSDARQVESSAAKSEDSNVQGNYDYLAQSNGGLERLIQNHIEVSKIGRQIAEEALDS
QRKSEEFSPDPGSEPTSGNTEAQISTTVFPEGVIDISVPGVGSDNSNSDLTPSFTQIRNN
VQLSSISNDQGVSPDESMMEMIGDSIINESPNPTLTDGNDEAAMAVIMSLLEADAGLGGP
VDFSGLPWPLP
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccccgttgccacacggatatggtggtgagctaccggcggacagtgggggtgtt
gtcgagggcggcgcccaggtcgacgccgaggcctgcgtgagccaggaggcccatccttgt
ccaggttctcgtaaacagcagcgtaatccgcggcggcaaggagaggaacgagaagcccag
gatcaatggcagctgccggcggaagaggaccacgggcccccgatacatcgtcgccaagaa
caacccgcggacatggtggcccaggagatggcccagggctacacccatctccttcacgac
gggcaggagcctcaggagttcatatccctcgaggaacttaagccaaggctgcaggatcag
gaccgccatggccgcactcaaagccacaacgaggtacggacggtaccagcttcccccaac
tcagctctctatcaccactccggacagcagcggtcctactacaatctcaccccggttcca
aagagttctcgctcctcggtgtactttggtgggaccgacaccggggtcgaagacttggcc
gtacctgcaggaggcgttggacccggtggcggcggtgttccaaaccctcagggtccgatg
ggggccgaatcgggatcccggatgaaagccgagcagggaggtgcagcgaccgcctcccat
cattaccgacaggccagtcatcaacatcatcaccatcgccatcaccaccaccaacaaagt
cagaatcagagtccgaatcactacaattccgaccactgtactccgctgcacgtccagcct
ttcgagtcgccgtcatccgtcgacgcagggtttgccccgacgataaggaagcggaaaatt
tcctggaacgagagtggtgaattgcagaacgacacgggagatgacaccaaatccatcaga
acgaacgacgacagtaaaagtgagggtagtgaattgcagaacgacaggggagacgacacc
aaaatcgtaagaatgcacgacgacagtaaacggcaaaatcatagcgagatcgaaaaacgt
cgacgagataagatgaacacttacataaccgagttgtcggcgatggtgccgatgtgtcac
gcgatgtcgaggaaattggataagctgaccattctcaggatggttgtgcaacatgttaaa
actatcctgggcactgccgctccgtatacagagggacactacaagccccctttcctcagc
gatcaagagctcaagatgctgattctccaggcagccgaaggcttcgtctttgtggttggt
tgtgaccggggccggatcctttacgtctcggaatcggtttcgcaaacgcttaactattct
caaacgacaattgcaactttacttgatacaaaacgctggttcccgcagagtgacttaatg
ggtcaaaactggttcgacatcctgcatcccaaggacgtcgctaaggtcaaagaacagctt
tcctcctccaatctgagcccgagggagcgcttgatcgacgttaagaccatgctcccagtc
aagactgacataccacacgacgtgtcgatgctctgtccgggggctcgaagatcttttttc
tgtcgaatgaagcgaaaactggagaacacgcgatgcggggatcctaaggtgaaggaggaa
gcagacacgacgaccggatgtcatcggcgtaagaaacagcagaataatgattgtaagtat
tgcgtcattcagtgcaccggatacttgaagacttgggctacggcgaaaatcggacttgaa
gagcaggaaggcgaaggcgacggagaagcgtgcaatctttcctgcctcgttgcggtaggt
cgagttcaaccgccacttccggctttctctgcaccccgaagaccacatttgagaacgata
cagttcgtgtcgcgtcacgcagtggatggaatatttttatccgtcgatcagagagtcaca
ctggtgctcggctttcttcctcaagaactgttaggaacgaatatttacgagtattaccac
cgcgatgatatttcgcacctcgcagagtcccacaaagcggctctccagacacgggaaaaa
gtaaccacgcaggtgtacaggttcaggagcaaagagaccactttcgtccgaatgcagtcc
gagttgaagtcttttcgaaatccttggacgaaagacgtcgagtcgctgatagctaagaac
tcggcaattttttccgacgcgaggcaagtcgaaagtagcgcggcaaaatccgaagactcc
aacgttcagggaaactacgattatctcgcccaaagtaacggtggattagaaagactgatc
caaaatcacatagaggtgagtaaaatcggacgacaaatagccgaggaagccttggactcg
caacggaagagtgaggaattctcaccagatcccggatcggagcctacttccggaaatacg
gaggcgcaaatatcgacgacagttttccccgaaggagtaatagacatatcggtacccgga
gtcggaagtgacaacagcaacagtgatttgacgccatcttttacccagataagaaacaac
gtccaattgagcagcatatctaacgatcaaggagtctcgcccgacgaaagtatgatggag
atgatcggtgactccattatcaacgaatctccaaatccgacactgactgatggcaacgac
gaggcagcgatggctgttatcatgagtctcctcgaggctgatgcaggtttaggaggtccg
gtagatttttctgggctaccctggccgcttccataa
DBGET
integrated database retrieval system
