Neodiprion lecontei (redheaded pine sawfly): 107226213
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Entry
107226213 CDS
T09006
Name
(RefSeq) actin-interacting protein 1 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nlo04990
]
107226213
Domain-containing proteins not elsewhere classified [BR:
nlo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107226213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
eIF2A
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
WD40_like
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
BBS2_Mid
Beta-prop_RIG_1st
Beta-prop_IFT122_2nd
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
107226213
NCBI-ProteinID:
XP_015522431
UniProt:
A0A6J0C546
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All DBs
Position
6:21570713..21576650
Genome browser
AA seq
602 aa
AA seq
DB search
MSYETKYIFATLPRTQRGQPLVLGSDPKGKNFLYTNGNSVIIRNIDNPAIADVYTEHSCP
VNVAKYSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV
GEGRERFGHVFMAETGTSVGEISGQSKSINSCDFRPARPFRLITGSEDNTIAVFEGPPFK
FKMTKQDHGRFVQAVRYSPSGNLFASAGFDGKVFIYDGTTSDLVGEVGSPAHQGGVYGVA
WKPDGTQLLTASGDKTCKLWDVETRSLISEFNLGSTVDDQQVSCLWQGNHLLSVSLSGFI
NYLDINNPDKPLRVIKGHNKPITVLALSTDRSTIYTGSHDGYITNWNAESGENNRVQGQG
HGNQMNGMKAAGDNLYTCGIDDSLKIVDVSSNTYTGASIKLDSQPRGLDIYGDIVVTVSV
RQITIVQDGRKMSSLSVDFEPSCVTINQENGDVTVGGTTDNKAHVYELSGTNLSPKTELQ
HLGPITDASYSPDNKYLVVCDANRKVILYALPEYKKLAHNKEWGFHNARVNSVAWSPDSL
HVASGSLDTTIIIWSVESPAKHTIIKNAHPQSQITRLVWLDDETLISVGQDCNTKIWRVE
KI
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgaaacgaaatacatatttgcaactttgccacgtacgcaaagaggtcaacct
ttggtacttggcagtgatcctaagggaaaaaatttcctttataccaatggaaacagtgtt
attattaggaacatcgataacccagctatcgctgatgtttacactgaacattcttgcccg
gtgaatgttgccaaatattcgcctagtggtttttacatagcatctggtgatcaatctggg
aaggttcgtatctgggataccgtgaacaaagaacatattctgaaaaatgaatttcaccct
attggaggacccattaaagatatagcttggtctccggataaccaacgtatggtggttgtt
ggcgagggtagagaaagatttggtcatgtatttatggctgaaacagggacgtcagtggga
gaaatatcgggtcagagcaagtcgattaattcttgtgactttagaccagcaagaccattc
agacttattactgggagtgaagataacacaattgccgtgttcgaagggccaccgttcaaa
ttcaagatgaccaaacaagatcatggtagatttgttcaggctgttcgttactctccatct
ggcaatctatttgcatcagcaggatttgatggaaaggttttcatctacgatggtaccaca
tctgatcttgttggcgaagttggttctccggcccatcaaggaggagtttatggcgttgcc
tggaagccagatggcacacaacttctcacagcctcgggggataaaacgtgtaagctctgg
gatgtggaaacaagatcacttattagcgagttcaatttgggctcaactgtagatgaccag
caggtcagctgtttgtggcaaggcaaccatttgctgagtgtatcattgagcggattcatt
aattatctagacatcaacaaccccgacaaaccgttgagagtaatcaagggacataacaaa
ccaatcacggtattagcattgagtacagacagaagcacaatttacacaggttcccatgat
ggttacattactaactggaatgctgagtcgggtgaaaataatcgtgttcaaggacaagga
catggtaatcaaatgaatggaatgaaagccgctggagataacctttacacttgtggtatt
gatgacagtttgaagatcgtcgatgtatcctctaatacttataccggggcctcaatcaaa
ctagattcccagccacgaggtcttgatatatatggagatatcgttgtcactgtttccgtc
agacagataacaattgttcaagatggtagaaaaatgtcgagtctttcagttgattttgaa
ccatcctgcgtcacgattaatcaggaaaatggtgacgtaacagttggtggtacaactgat
aataaggctcatgtttatgaattatctggaaccaacctttctccaaaaactgaactacaa
catcttggtccgattactgacgcttcctacagtcctgataacaaatatcttgtcgtctgt
gatgccaacagaaaggtgatactgtatgcgctacctgaatataagaagctagcacataac
aaggagtggggcttccataatgcaagagtaaattctgttgcgtggtcgcctgattctctt
catgtagccagtggtagtcttgacaccacaattattatatggagcgtggaaagtcctgcc
aagcataccatcattaagaatgcccatccacaaagtcaaattactcgtttggtatggctt
gatgatgaaacgttgatatctgttggtcaggattgcaacactaaaatatggcgtgtggaa
aaaatataa
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