Neodiprion lecontei (redheaded pine sawfly): 107226246
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Entry
107226246 CDS
T09006
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nlo01009
]
107226246
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107226246
Protein phosphatases and associated proteins [BR:
nlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107226246
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107226246
mRNA cycle factors
Stress granule specific factors
107226246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
107226246
NCBI-ProteinID:
XP_015522486
UniProt:
A0A6J0C599
LinkDB
All DBs
Position
4:23238163..23253609
Genome browser
AA seq
774 aa
AA seq
DB search
MLRHQHHSMQNQLREQNRMAGPMHPMQQHPHQPQHPHQHRSPHIPHPQQQLAMAAHQHPP
HQIPHGIAPQNNPRQPVLLGINSQHTNGVMANVGLIDQSNTVAGTLPTQLTVQQGQHQTD
QLSQQQLHNQQNAEQNNSPPNEDNGESRDQSPSNQNQINTNNTNLANMKEKTPMCLVNEL
ARFNKIQHQYRLTNEEGPAHKKKFTVTLKLGDEEFVAEGPSIKKAQHSAATKALEDTWYR
HPPPKPARAMRILHPGKCPAASEHLPPTVELNALAMKRGEPTVYTFSQAPPAPLQQFVPH
GYGNFPRMLTPRYPTYNRGFQSQQQGLYVVTLKVGDREFLGRGVTGQAARHDAASRALEQ
LRQLPLPEEITNTCAANDNGTLNGIDDPNAELKSPVSLVHETALKRGLSVNFEVVSERGK
PHIRIFVTKCTVGDRTTTGEGSSKKVSKKRAAELMLDELKRLPPIPLTIQTPSVQRLKRK
PPATKKKSRNLIKVYQEPRTEPEAAEEVNPISRLIQIQQAKREREPVYTLVDEKGAPRRR
EFIMEVTVGSNSAQGVGPNKKLAKRAAAEALLMQLGYSKPQPQPVKPSIKTGDNENSEGK
PRKVTFLEEDQVNEIPNHSVGGTTGRQLVPGLLLVDGGQESKLGGGPSVQAVAEELRGQQ
QHQTPVVSPKDQLRYLAQLLSFDIQFSDFPKGNHNEFLSLVSLSTDPPQVCHGAGPTTDA
SRDQAALTALRTLSKLGLDNVTNPQNKKDKGASGDGLHISNQVKNNMLNGAIIK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacaccaacatcattcgatgcaaaatcaactcagagagcagaataggatggca
ggacctatgcatccgatgcagcagcatccacaccagccgcagcatcctcatcaacatcga
agtccacacataccgcaccctcaacaacaattagcgatggctgcacatcaacatcctcct
caccaaataccacacggtatcgctcctcagaacaatcctcgacagccagtgttgcttgga
atcaactcgcaacacactaatggcgtaatggctaacgttggattaatcgaccagagcaat
acagttgctggtactcttcccactcaactcactgttcaacaaggacaacatcaaactgac
caactgtctcaacagcaactgcataatcaacagaatgcggaacagaataattcacctccg
aatgaagacaacggagagtccagggaccagagtccatcaaatcagaaccaaatcaacaca
aataatacaaatttggcaaacatgaaagagaaaactccgatgtgtctcgtcaatgaactc
gcaagatttaataaaatccaacaccagtatagattaaccaatgaagaaggccctgcacat
aaaaaaaagtttactgttactctaaaacttggtgatgaagaatttgttgccgaaggtcca
agcattaaaaaagcacagcatagcgcagccacaaaagcacttgaagatacctggtacaga
catccaccgccaaaaccagcaagggcaatgaggatcttacatccaggaaaatgtcctgct
gcttctgaacatctaccaccaacagtggaattaaacgctttagcaatgaaacgtggtgaa
ccaacagtttacacatttagccaggctcctccagcccctctgcaacagtttgtgccacat
ggatatggaaactttcctcgaatgctgaccccacgttatccaacctataaccgtggattt
caatcacagcagcaaggactctatgttgtaacattaaaggttggagaccgcgaatttctt
ggaagaggtgttactggacaggctgcacgccacgacgccgctagccgagctttggaacaa
ctgcgccagctaccattgcctgaagaaataacaaacacttgtgctgcaaacgacaatgga
acattgaatggaatagatgatccaaatgcggaattgaaaagccctgtttcgcttgttcat
gagacggcattgaaacgaggcctttcggtaaacttcgaagttgtatcagaacgaggcaag
ccacatatccgaatttttgttaccaaatgtacagttggggatagaactacaactggagag
ggatcatcaaagaaggtatcgaaaaagcgtgccgcagaattaatgctggatgagttaaaa
cgcctccctcctattcctcttacaattcaaactccctctgtacagcgtttaaaacgaaaa
ccaccagcaaccaaaaaaaaatcacgaaatctcataaaagtttatcaagaacctcgcact
gagcctgaggcggccgaggaagtgaatcccatttctcgtctcatccaaattcaacaagca
aaacgcgaaagagaaccggtttatacacttgtagatgaaaagggcgctccacgacgtaga
gaattcatcatggaagttactgtcggatcaaattctgctcaaggagttgggccaaataag
aaattagctaaacgagctgctgctgaagcactactaatgcaattgggatatagtaaaccg
cagcctcagccagttaagccttcaatcaagacaggagataatgaaaattctgagggaaaa
ccaaggaaggttacgttcttagaagaagatcaggtcaacgaaattccgaatcattctgtt
ggcggtacaactggacgacaactagttcccgggcttctgttggtagatggaggccaggaa
tcaaaacttggtggaggacccagtgttcaagctgtagctgaggaattacgtggtcagcaa
cagcatcagacacccgttgtttcccccaaagatcagttgaggtatttggctcagctacta
agctttgacatacagttcagcgactttccaaagggcaaccataacgaattcctttctctt
gtctctctgagcactgatccgccccaggtgtgtcatggtgctggaccaacaacagatgca
agtcgagatcaagctgcgctcacagctttgcgcactctcagcaagcttggcttagacaat
gtaacaaacccgcaaaacaaaaaagataagggagcctcaggggatggcttacacattagt
aatcaagttaaaaacaacatgctaaatggagccattatcaaataa
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