Neodiprion lecontei (redheaded pine sawfly): 107226302
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Entry
107226302 CDS
T09006
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107226302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107226302
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107226302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
ACR_tran
Motif
Other DBs
NCBI-GeneID:
107226302
NCBI-ProteinID:
XP_046589711
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Position
3:30567308..30691393
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AA seq
701 aa
AA seq
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MESSTDTLRLNDTKLFKVIKETVPGDGTETLNIIEIRDNVLYVWNSNDSCILTLNVGAAR
GKTGDEIVYQTLLLTDPPTYEVTNLQINETTTQLAIWGNCGIAVVELPKRWGKDALFQGG
KEVISCRSHSLDERLFHCSVVTEVRRVRWHPASTKDCHLLVLTSQNTFNLYECEPNGGQS
LIKTWTVGPAFSSPAKIPSPASLGETAVDFDFATPTLRPEIDRKDTQSKDVDWNDIEWPI
LVLKGNGNVYTVHGNILNGKGEKPVVTGPLSIYPRTHDNYGVDSCSIMCLQTTPPLVVVA
TNTGKVYHSILLQEKFEDDEKTSWSQYGSTFSLHTPEDALYVYECVEMELGLGFWDIEKK
YSCPVHLHVDRGNSSRYFCSHNAGIHVVNLPMVSQLADFIQAPDDDSNLFLPSLSTQSSS
QYLVCTKTKSSLKAAPVLGFGLLQEPCIMIALLHTGTVVSLSVVDLYYLPTPMPLEPVTS
PSKKITKEAFDTYIKSLLRHNVSQPILKFGSTTESMPQEVLQLLLRATEVFRSEHFARHN
KVRTEIAKRVRTLRALKTHQLKELELLAEQKKKLQEVAERLAERYEDMKDQQEELARRAE
EVLWLANQRQPSMSVAEKEEANEFKKISSKTKELIQQLEKLKYKEKYQSEQLANCHKLEA
NKNIIISTAREDTIKTNLKEISAKISNLMSTVKSLEEEVLS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagcacggacacgttgcgtctcaacgatacgaagttgtttaaagtgataaag
gagactgtgccaggcgacggcacggaaactctgaacatcatcgagattcgggacaacgtt
ttgtacgtctggaacagcaacgatagctgcatcttgaccctgaacgtcggggcggcgcgc
gggaagaccggcgacgagattgtttatcagacattactgctcacagatcctcccacgtac
gaggtgacaaacttgcagattaatgaaaccacaacgcaacttgcaatctggggtaactgc
gggatagctgtcgtagagctgccaaaacgatggggaaaagacgctctgtttcaaggtggc
aaagaagtaatttcctgtcggagccacagtctcgatgaaaggttatttcactgctcggtt
gtgaccgaagtgagacgcgttcgttggcatccagcttccaccaaagactgtcatctcctc
gtactcacatcgcagaacactttcaacttatacgagtgtgagccaaatggtggacaatcc
ctgatcaagacctggactgttggtccagcgtttagctcgccagcaaaaatacctagtcct
gcttctttgggtgaaactgcagtggacttcgatttcgctactccgactctcagaccggaa
attgataggaaagacactcaaagcaaagatgtggattggaatgatatagaatggccgatt
ttggtactgaagggcaacggaaatgtctatactgtacacggcaacattttaaacgggaaa
ggcgaaaaaccagtggtcacaggtccgttgtccatatacccgaggacacatgacaactac
ggcgtagactcttgctcgataatgtgcctacagacaacgcctccactcgtcgttgtggct
actaataccggaaaggtctaccacagtatcttacttcaggaaaaattcgaagacgatgaa
aaaacgtcgtggtcacagtacggatcgacctttagtcttcacacgccagaagatgccctc
tacgtgtacgaatgtgttgaaatggagctgggactcggtttctgggacattgaaaagaag
tactcatgccctgtacacttgcacgtggatcgtggcaacagctcgaggtacttctgttct
cacaacgcaggcattcacgtcgtaaatttgccaatggtatcgcaattggcggactttatt
caggctccagatgatgattcaaacttgttccttccatcattatcaacacagtcaagctct
cagtatctggtatgcaccaagacgaaaagcagtttaaaagctgctcccgttttgggcttc
ggacttctccaagaaccatgtatcatgattgcgcttcttcacaccggaacagtagtcagc
ctatctgtggtggatctttactatttaccaactcctatgcccttagaaccagtcacaagt
cccagtaaaaagataacgaaggaagcattcgatacgtatatcaaaagtcttctcaggcat
aatgtgtcgcaacctatcttgaagtttggatcaaccacggaatcgatgcctcaggaagtg
ttacagctattattgcgagccaccgaagtatttcgcagtgaacactttgctcgtcacaac
aaagtgcgaacagaaattgctaaacgagtccgtacattacgagctctgaagactcatcag
ctcaaagaattggaattattggcagaacagaaaaaaaaactacaggaagtcgctgaacgt
cttgctgaacgctacgaagacatgaaagatcagcaggaagaactcgcgcgaagagccgaa
gaagttttgtggttggcgaatcaacgacagccgtcgatgtcagtggccgaaaaagaggaa
gcgaatgagtttaaaaaaattagcagcaaaacaaaagagctaattcagcagcttgaaaag
cttaaatacaaggaaaagtatcagtctgagcagttggcgaactgccacaaactcgaagca
aacaaaaatataattattagcacagccagggaagatacaatcaagacaaacctcaaggaa
atatcagcaaaaatttcaaatttgatgtcaacggtgaaatcattagaagaggaagtgttg
tcctaa
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