KEGG   Neodiprion lecontei (redheaded pine sawfly): 107226312
Entry
107226312         CDS       T09006                                 
Name
(RefSeq) DNA ligase 1 isoform X3
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03030  DNA replication
nlo03410  Base excision repair
nlo03420  Nucleotide excision repair
nlo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107226312
   03410 Base excision repair
    107226312
   03420 Nucleotide excision repair
    107226312
   03430 Mismatch repair
    107226312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nlo03032]
    107226312
   03400 DNA repair and recombination proteins [BR:nlo03400]
    107226312
Enzymes [BR:nlo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107226312
    6.5.1.6  DNA ligase (ATP or NAD+)
     107226312
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     107226312
DNA replication proteins [BR:nlo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107226312
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     107226312
DNA repair and recombination proteins [BR:nlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     107226312
   NER (nucleotide excision repair)
    Other NER factors
     107226312
   MMR (mismatch excision repair)
    Other MMR factors
     107226312
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme HVO_A0114
Other DBs
NCBI-GeneID: 107226312
NCBI-ProteinID: XP_015522584
UniProt: A0A6J0C8B2
LinkDB
Position
5:990745..996083
AA seq 896 aa
MAQKSITSFFTKRVPKIDTNDLESELSLSKKKDDDDSPSVAKRKRVDSSNGTESISPPPA
KKISTSVNDAPSTSSSQKSPGSIQRRQIGKENENKSVVKDEDVKKTTPKRTTTKNDNRNS
KNKINQSAKKRARIIPQDDSSDDDVHLALPDSPIKPDAKAFLKSPVKKEMESEDDISPKS
KHASEEEEAESPKKAKVEKPKASPATKKSPKNVHSFFAVKQKNGSKPEEKKTSNGSAKTQ
TYSYNPGASKYHPINDASWKQNEKVPYIALARTLEIIESTSARLKMIEFLSNYLRSVIVL
SPDDFLASVYLCLNQLGPAYEGMELGIAETTLMRAIAQCTGRTVAQIKSDVQEVGDLGIV
AEESRSNQRMMFQPAPLTVSGVFNKLKEISQMTGQASMTKKVDKIQSLFVACRFSEARYF
IRSLSGKLRIGLAEQSILQAIALACATTPPGQDYPPKILDASEKRSAESFKQDYDKKALI
LKTTYCECPNYDLIIPVILKEGINALPERCKLTPGIPLKPMLAHPTKGVQEVLTRFDGLK
FTCEWKYDGERAQIHIAENNHVSIYSRNQENNTSKYPDIIARLGNTRGENVKSCVLDCEA
VAWDRENEQILPFQVLITRKRKDASEANIKVQVCVFMFDLLYLNGTSLVKEPFIKRRELL
KENFKEVKGEWQFATSLDTTTMEEVQGFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNW
LKLKKDYLDGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFSD
EDLQTHTEFLKKHVISQPKSYYRYDVSHEPDHWFEPVQVWEIKCADLSLSPVHRAAAGII
DPEKGISLRFPRFIGVRNDKNCEDATSSQQVADLYNNQEHIKNQTSTTKVAEEDFY
NT seq 2691 nt   +upstreamnt  +downstreamnt
atggcgcaaaagtctatcacttcatttttcacgaaacgtgtgccgaaaattgatacgaat
gatctggagtcagagctaagtttgtccaagaagaaagatgacgacgacagtccttcagtt
gctaaaaggaaacgagtggacagttctaatggcactgaatctataagcccgccacctgcg
aaaaaaatcagtactagtgtcaacgatgcaccatctacctcatcgtcacaaaaatctcct
ggatcaattcagcgtagacaaataggaaaagaaaatgagaacaaatctgttgtcaaagat
gaggatgtcaagaaaactacacccaagagaaccacgacaaaaaatgataatcgtaattct
aaaaacaaaattaatcagagcgccaaaaaacgagcgagaataatccctcaggatgattct
agtgacgacgacgttcacttggcactcccagatagtccaattaaaccagatgctaaagca
tttctgaaaagtcctgttaaaaaagagatggaatcagaggatgatatatctccaaaaagt
aagcacgcctcggaagaggaagaagcagaaagtcctaagaaagcaaaagtggaaaagcca
aaagcttcgccagcgactaaaaagtctccgaaaaatgttcatagtttctttgcggtaaaa
cagaagaacggttcaaaacctgaagagaagaaaactagtaatggtagcgccaaaacacag
acttattcgtataacccaggtgcgtcaaaatatcacccgatcaacgacgctagttggaaa
cagaatgaaaaagtaccgtacatcgcattggctcgcactttggaaattattgaaagcact
agtgcgaggctgaaaatgattgaatttctctcaaattatttgcgatccgtcattgttctc
agccctgatgatttcctagccagtgtttatctttgtttgaatcaactgggcccagcctac
gaaggcatggagttgggaatagccgagaccacacttatgagagcaattgcacagtgtacc
ggcagaactgttgcacagattaaatctgacgtccaagaagtcggagacttgggaatagta
gctgaagaaagtcgctctaatcagcgaatgatgtttcagccggcacctctgactgtttct
ggtgtgtttaataaattgaaagaaatctcacagatgacaggacaagcctccatgaccaaa
aaggttgacaagattcaatctctgtttgtcgcatgtcgtttttctgaggcaagatacttt
atacgttctttatctggaaaattgagaataggtctggctgagcagtctatcttgcaggca
atagctttggcctgtgccacaactccacctggtcaggattatcctccaaagattttggat
gctagtgaaaaaagatctgccgagtcattcaaacaggattacgataaaaaagccctgata
cttaaaactacgtactgtgaatgtccgaattacgatctcataattcctgttatactaaag
gaaggcataaatgccttaccagagcgatgtaaattaactcctggcattccacttaagcct
atgctggcacacccaacgaaaggtgttcaagaagtcttgacaagattcgacggactaaaa
tttacttgtgaatggaaatatgatggcgaaagagcgcagattcatattgctgagaacaat
cacgtgtcaatttacagcagaaatcaagaaaataataccagtaaatatccggacattatt
gcaagattgggcaatacacgtggggaaaacgttaaaagttgtgtattggattgcgaagct
gttgcttgggacagagaaaatgagcagattctgccattccaagtgttaatcacgaggaaa
cggaaggatgcaagtgaggcgaatatcaaagtacaggtttgtgttttcatgtttgatctg
ctctatttgaacggcacatcactggtgaaggaacccttcataaaacgtagagaattgctg
aaagaaaatttcaaggaagttaagggggaatggcaattcgcaacaagtcttgatacaacg
actatggaagaggtccaaggctttctagatgaatctgtaaaaggaaactgcgagggtttg
atggtaaaaacattggagcaagatgcaacgtatgagatagctaaaagatctcgcaactgg
ttgaagttgaaaaaggattatttagatggggtgggagatacgctggacgtagtagtgatc
ggaggttacattggaaagggaaagaggactggtacttatggggggtttttattggcttgt
tatgaccaagagaatgaagagtatcaaagcatctgtaagattggaactgggttcagtgac
gaagatcttcaaacgcatacagaattcttaaagaagcatgtaatctcgcagcctaaatct
tactaccgatatgatgttagccatgaacctgaccactggttcgaacctgtccaagtttgg
gaaataaaatgtgccgatctctccctctcacctgtacacagagctgccgctggcattatt
gatccagagaagggtatatctctgcggtttccgcgatttataggtgtacgtaatgacaaa
aattgcgaggatgcaacatcatctcaacaagttgctgatttgtacaataaccaggaacat
attaaaaatcaaacgagtacgacaaaggttgctgaagaagatttttactag

DBGET integrated database retrieval system