Neodiprion lecontei (redheaded pine sawfly): 107226517
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Entry
107226517 CDS
T09006
Name
(RefSeq) AP-3 complex subunit beta-2 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107226517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107226517
Membrane trafficking [BR:
nlo04131
]
Endosome - Lysosome transport
Others
AP-3 complex
107226517
Endosome - Golgi transport
107226517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
107226517
NCBI-ProteinID:
XP_015522841
UniProt:
A0A6J0C683
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Position
5:complement(27160507..27166811)
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AA seq
1060 aa
AA seq
DB search
MLSAAANTMSNNGGSYSNDRPASAGEPELATDAASGGFFHSDYKKHEDLKQMLDSNKDGL
KLEAMKRIIGMVAKGRDASELFPAVVKNVVSKNIEVKKLVYVYLVRYAEDQQDLALLSIS
TFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLAIKDSASDMSPYVRKTAAHAIPKLY
SLDPEQKEELIAVLEKLLSDKTTLVVGSAVMAFEEVCPERIDLIHKNYRKLCNLLVDVDE
WGQVVIVNMLTRYARTQFTNPNADDAEEEENRPFYDSDSDSSNSKKPKFSLDPDHRLLLR
NTKPLLQSRNASVVMAVAQLYHHAAPRSEVMIAAKALIRLLRGHREVQSIVLHCIASISI
SRKGMFEPFLKSFFVRTSDATHIKLLKLDILTNLATETSIGVILREFQTYISSSDKEFVG
ASIQAIGRCASNIKEVTDTCLNGLVSLLSNRDEAVVAESVVVIKKLLQTQPNEHKDIIAH
MAKLMDFITVPQARASILWLLGEYSDRVPKIAPDVLRKMAKSFINEQDIVKLQTLNLAVK
LYLSNPNQTKLLCQYVFQLAKYDQNYDIRDRARFLRHFIFNQDGGTAETKLSQFAKKIFL
APKPAPMLESRFKDSQFQLGTLSHYLDTPCVGHHILPQFPEVAPDPSVRDVAEPVSAHEI
KDERHSRKEKRDKKATKEKEKSFYSEDESSPAEVSESESEDESTDSSESSSEDRESSEYS
SDSDKYSEEDEKKKKKNVIKKLNNSDSGSSSQDFDSENESDSEESEEEEKIKPVKREGKE
DAKEKPKSNLDLLLDLDDVIPITPIMTPSLGGFLTPMNPLQLNGVTEVAASFIPIKATEL
LNKVSGKGLKLDFRFTRSQHLVSSAMNSIELTFSNESSTTIKDIKVGNKNLPSGIQVHDF
MPIQILQPKTTSSSTIGVNFNDSTQPVNLNINYQKDDETLSSSVTVKAPVGELVRSVMVT
ESFFTAEQAKLKGMNEHVVKIAFPGHNRKIISQKVFESANVALISSEGNILRFAAQTLAS
KSLVLITIKIGETDDLEVCVNCEKMVIGSMLLNDIKANFK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggcagcggctaataccatgtctaacaacgggggttcgtacagcaatgacagg
cccgcaagcgctggtgaaccagaattggcgaccgacgctgcttctggaggattttttcac
tctgattacaaaaaacatgaagatctcaagcagatgctcgacagcaacaaagacggactt
aaactggaggccatgaaacgaattatcgggatggtggcgaaaggtagagatgcatcggag
ctttttccggcggtggttaagaacgtcgtatcaaagaatattgaagtgaaaaaattggtg
tacgtatatttggtacgttatgcagaggaccaacaggacctggccttgctatcgatatct
acatttcaacgagctctgaaagatccgaatcagctgataagagccagtgccctgagagtt
ttgtcaagtatcagggtatccatgattgtgcctattgtcatgctggccattaaagactct
gcaagcgacatgtctccctatgttagaaagacagctgctcatgctattccaaaactctat
tcgttggatccggagcaaaaggaagaactcatcgctgttttagaaaaattattatcagat
aaaactactctagtcgttggatctgctgttatggccttcgaggaggtctgtccagaaaga
attgatttgattcataaaaattatagaaaactttgcaacttattggtggacgttgacgaa
tggggacaagtcgttatagtcaatatgcttaccagatatgctagaacacaattcaccaat
cccaatgcagatgatgcagaggaggaggaaaatcgtccattttacgactccgattcggat
tcatccaactcaaagaagcctaaattttctctagacccggaccaccgtttgctgttaagg
aataccaaaccacttttgcagagtaggaacgcatcggtagtgatggctgttgcacagcta
taccaccatgcagcacctcgcagcgaagtgatgatagctgcaaaggcgttgatcaggtta
ttacgcggccacagagaagttcaaagtatagttcttcactgcatagcgagcatatccata
tccagaaagggtatgttcgagcctttcctgaaatcgttttttgtcagaacatcggatgcg
acacacatcaagctactgaaacttgacattcttacaaatttagcaactgaaaccagcatc
ggtgttatattgagagaatttcagacttacatttctagcagcgacaaggaattcgttggc
gctagcatacaggccattggtagatgtgccagtaacatcaaggaagttactgatacgtgt
ctgaatggcttggtttctttgctgagcaacagagatgaggccgtggtggctgaaagtgtg
gtggtgatcaagaagctgttgcaaacacagccaaacgagcacaaagatataatagcgcat
atggcaaaactgatggattttataactgtccctcaagctagagcttcgattctatggctt
ttgggagagtactcagacagagtgccaaaaatagctccagatgtgctgagaaaaatggcc
aagagtttcataaacgaacaggacattgtaaagctccaaacgctgaacctcgcggtgaag
ttatatctatcaaatccgaaccagaccaaacttctctgtcagtacgtcttccagctggct
aagtatgaccaaaattatgacattagggacagggccagattcctcaggcatttcatattc
aatcaagatggcggaaccgccgaaaccaagttatcacagtttgccaagaagatatttttg
gcacccaaaccagccccgatgctggagtctagatttaaagactcccagttccagctgggc
acgctctctcattatcttgacactccttgtgtcggtcatcacattttaccacagtttcca
gaggttgcaccagacccttctgtcagagatgtcgccgagccagtcagcgcccatgaaata
aaagatgaaagacacagtagaaaggaaaagagagataagaaggcgacaaaggagaaggag
aagagcttttatagcgaggatgagagcagtcctgcggaagtttcagagtctgagagtgaa
gacgagtctaccgattcttcggaaagttcgtctgaggatagggagtcctcggagtattct
tccgattctgataagtactccgaagaggatgaaaagaagaagaagaaaaatgtgattaag
aagttgaacaacagtgacagcggatccagttcccaggattttgatagcgagaatgaatct
gatagcgaggaatccgaagaggaagaaaagattaagccagttaaaagagagggtaaagaa
gatgctaaggaaaagccaaagagcaatcttgatctgcttttggatttggatgatgtgatt
ccaataactccaataatgacaccgagtctcggtggtttcttgactccaatgaacccgctg
cagctgaacggagtgacggaagtagcggcttcatttattcccatcaaggccacagaactg
cttaataaagtcagtggaaaaggactgaaacttgattttaggtttaccagatctcagcat
cttgttagctctgccatgaatagcattgagctaacgttttctaacgaaagtagcactacc
ataaaagatatcaaagttggaaacaagaatctgccatcgggaattcaagttcacgatttt
atgccaatacaaatacttcagccgaaaacgacatcatcttcaacaattggcgttaacttc
aacgattcaacgcagccggttaatttaaacataaattatcaaaaagacgatgaaacgctg
tcgtcctcagtaacagtcaaagcacccgtaggtgaattagtacgatctgtaatggtgact
gagagcttctttaccgcggaacaggccaagttgaaagggatgaatgagcatgtggtgaaa
atagcttttcctggacacaacaggaaaattatatcacagaaagtattcgaatctgccaat
gttgctctgatttctagtgaaggcaatatattaaggttcgcggcgcagactttagcctct
aaatcgttagtgttgataacaataaaaatcggagaaactgacgatttggaggtatgcgta
aactgtgaaaaaatggtgataggatcgatgctgctcaacgacattaaggctaattttaaa
taa
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