KEGG   Neodiprion lecontei (redheaded pine sawfly): 107226619
Entry
107226619         CDS       T09006                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107226619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nlo03400]
    107226619
Enzymes [BR:nlo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107226619
DNA repair and recombination proteins [BR:nlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107226619
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase LIG3_BRCT BRCT_2
Other DBs
NCBI-GeneID: 107226619
NCBI-ProteinID: XP_046588431
LinkDB
Position
2:7346342..7425850
AA seq 1050 aa
MSDGDESPEEKPFAVERAKTGRAKCKKCKCPIEQGVVRVAKLMSNPFGDGKMKAWHHLTC
IFEVFAKQRASTKRIDDLDDDVAGWQELDDEGKELVQGKLEEFNDSAPVKNANKKISPGK
KNTEKRDSSAKNESRNDNSSKNGKTSVGGSKSRVEPIPSTSKVSPKKETPVGKCRDDAFR
EFRRLCASVANANAYTSKTAIVRQMLTKGCEGDGFKGDVTLWCKMLLPGVTKRVYNLQSK
QLVKLFSRMFNKDEDEMLEHLEQGDVAETIHAAFENSSLLQPSAQSHLTIREVDQFLDKL
SLLTKEDEQIQHFKSIVTRCTANDLKMIIRQVKHDLRITAGPKHILDAIHDDAYAAFQSS
RDLETVVSRFVEDSPLFSSSKKSAGNRETDPKRTSTGSKVGLTLMTPVLPMLAEACKSVE
MAMRKCPDGMLSEIKYDGERVQVHKQGNQFRYFSRSLKPVMPHKVNHFHDFISKAFPGGD
DLILDTEVLMIDTNTGKPLPFGSLGVHKKAQFKDANVCLFVFDCLYYNGETLMDKSMQKR
RSILKEKMVVIPNRIMLSEVEEVQDPKDLAHMIAKVIKMGLEGLVLKDVTGKYEPGKRHW
LKVKKDYLLDGAMADSADLVVLGAWYGTGKKGGMMSVFLMGCFDEDRNRWLTVTKVHTGH
DDVTLERLQGELKMEKIGKDVNLLPSWLHANKAMVPDFVAKDPKKQPVWEITGAEFTNQG
VHTADGISIRFPRVTRIRDDKDWKTATSLKELRTLFARSSDSVDVSLLLGNQTTSTSTVQ
RSLDSMLKPKAEKSEIENDGNSGNNQEELDEKSETEKCDEKNPSLLSRNGIALGNGSEVK
LEGDVKTATEIKEEPKSHGEDAHPSTRRGAKRKSDVLIDVKMKKEPDFSTTSTSSEGDGL
SKRKRLPRDLDESDYTDHTTNKAFKTVRVLLARDVKKDRRKALRNILKTLGAKVLEEEDQ
HLATHVIHSKAEVPTTIIQNYRRIFRKPELVQSECKGIVHLAWRKSGKFFFFLLFGNRKC
YLNTILLPVSLANLRTHFMHSQCVTLEISK
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgtcggacggcgacgaatcgccggaggaaaaaccgtttgcggtcgaacgtgcgaaaacc
ggacgagctaaatgcaagaagtgcaaatgtccgatcgagcagggtgtcgtcagggtcgcg
aaattgatgtcgaacccgttcggcgatgggaaaatgaaggcgtggcatcacttgacctgc
atctttgaagttttcgccaagcagagggcgagcactaaacgcatcgacgatctcgacgac
gacgtggctggatggcaggaactcgacgacgaggggaaggaactcgtccagggaaaactc
gaggaattcaacgattcggcccctgtcaagaacgcgaataagaaaatatcaccagggaag
aaaaatactgagaaaagagattcttcggcgaaaaatgagtcgcgcaacgataattcgtcc
aagaatggaaaaacatccgtcggtggatcgaaatcccgcgttgagccgattccgtcgacg
tcgaaagtctcgccgaagaaggaaacgcccgttggaaaatgcagggatgatgctttcagg
gaatttagaagactctgcgcatccgtggcgaacgccaatgcgtacacgagtaaaacggca
atagtcagacagatgctgaccaagggctgcgagggcgacggtttcaaaggcgacgtcacg
ctttggtgcaaaatgctgctacccggggtcactaagcgagtttacaaccttcagagtaaa
cagctggtcaagctatttagccgcatgttcaacaaggacgaggacgagatgttggaacac
cttgagcagggcgatgtcgccgagactatacacgcggcgttcgagaatagttcgcttctt
caacccagcgcccagagccacctcacgatacgggaggttgaccaatttcttgacaaactc
tcactgctgaccaaggaggacgaacaaatccaacatttcaagtccattgttaccagatgc
actgcgaatgacttgaagatgatcatcagacaggtgaaacatgacttgagaattacagcc
ggtccgaaacacatcttagacgccatccacgacgacgcgtatgctgcgttccaatcgtcg
cgtgatctcgagacagtcgtgtccagattcgttgaggattcacccttgttttcaagctca
aaaaaatcggctggcaatcgtgagaccgatccgaagagaacttctaccggtagcaaagtc
ggtctgactttgatgacgccggttttaccgatgctggccgaggcgtgcaagtctgtagaa
atggcgatgaggaaatgtccggacgggatgctctcggagatcaaatacgacggtgaacgt
gttcaagtccacaagcagggtaaccagttccggtacttcagtcgctccttgaaacccgtc
atgccgcacaaggtgaaccacttccacgattttatatcgaaagcatttccaggaggtgat
gatctcatactagacaccgaagtcctcatgattgacacaaacaccggaaaaccgttaccc
ttcggatctcttggtgttcacaaaaaagctcaattcaaggacgccaacgtttgtttgttc
gtgttcgattgtttgtactacaatggcgaaacattgatggataaatcaatgcaaaaacgg
cggtcaattctgaaagaaaaaatggttgttataccaaatcgaataatgttatcagaagtc
gaggaagttcaggatccgaaagacttggctcacatgattgcgaaagttataaaaatgggt
ctggaaggacttgttctgaaggatgtaacgggaaaatacgagccaggaaaacgacactgg
ctaaaggtaaagaaggactatttgctcgatggtgcgatggccgatagtgcagatttggtt
gttctcggcgcatggtacggcaccgggaaaaaaggtggcatgatgtcggtgttcttgatg
ggctgtttcgacgaggaccgaaatcgttggctcacagtcactaaggttcacacgggtcac
gatgacgttactctcgagcgactccagggtgaattgaagatggaaaaaatcggcaaagac
gtgaatctgctgccgagttggctccacgcgaacaaggcaatggtcccggactttgtggct
aaggacccgaagaaacagcccgtctgggaaataaccggggcagaattcacgaaccaagga
gttcacacggctgacggaatcagcattcgatttcctcgagtaacccgcatccgggatgac
aaggattggaagaccgcgacgtcgctgaaagaattgcggactctcttcgcgagaagttcc
gattccgttgacgtcagtctactgctgggaaatcagaccacgagcacttcgaccgttcag
cgatccctggattcgatgctgaaaccgaaggcggaaaaatcggagattgaaaacgacggt
aattccggcaacaatcaggaggaactagatgaaaaatccgagacggagaaatgcgatgaa
aaaaacccctcgttgttatctcggaacggaattgctctgggcaatggaagcgaagtgaaa
ctcgaaggcgatgttaaaacagccaccgaaatcaaggaagaacctaagagccacggcgaa
gacgctcatccgtcgactcgtcgtggtgcaaagcggaaaagcgacgtcctaatcgatgtc
aaaatgaagaaggaacccgatttttcaacaacgtcgacctcttctgaaggggatggatta
tccaagaggaagagattacctcgggatctcgatgaatcggactacactgatcacacgacc
aacaaagcgttcaaaactgtccgagttttactggcgcgggacgtaaagaaggacaggcga
aaagctcttcgaaacattctgaaaacactcggagccaaggtgctggaagaggaagatcaa
cacttggccacgcacgttattcattccaaggcggaagttccaacgacgataattcaaaac
taccgtagaatctttcgtaaaccggaattagttcagtcggaatgtaaaggaattgtgcac
ctggcatggcgtaaatcaggtaaattttttttttttttactattcggaaatcgaaaatgc
taccttaacaccattttgctgcctgtatcattggcgaatctacggactcatttcatgcac
tcacaatgtgtcacactcgaaataagcaagtag

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