Neodiprion lecontei (redheaded pine sawfly): 107226627
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Entry
107226627 CDS
T09006
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107226627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107226627
03016 Transfer RNA biogenesis [BR:
nlo03016
]
107226627
03012 Translation factors [BR:
nlo03012
]
107226627
04131 Membrane trafficking [BR:
nlo04131
]
107226627
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlo04147
]
107226627
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107226627
Transfer RNA biogenesis [BR:
nlo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107226627
Translation factors [BR:
nlo03012
]
Eukaryotic type
Elongation factors
107226627
Membrane trafficking [BR:
nlo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107226627
Exosome [BR:
nlo04147
]
Exosomal proteins
Proteins found in most exosomes
107226627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
107226627
NCBI-ProteinID:
XP_015522991
UniProt:
A0A6J0C6N0
LinkDB
All DBs
Position
5:complement(21333033..21336822)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARFEEIKKEVSSYIKK
IGYTPAAVAFVPISGWHGDNMLEPSSKMPWFKGWAVERKEGKADGKCLIEALDAILPPSR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGTVVTFAPAGLTTEVKSVEMHHEALT
EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKAIKSGDAAIVTLVPSKPMCVEAFQEFPP
LGRFAVRDMRQTVAVGVIKAVSFKDATGKVTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaggttcacatcaatatcgttgtcatcggacacgtagattccggtaaa
tcgaccaccactggtcaccttatctacaagtgcggtggtatcgacaaacgtaccatcgaa
aagtttgagaaggaagctcaggagatgggtaaaggttccttcaaatatgcatgggtcttg
gacaagctgaaagccgaacgtgaacgtggtatcacgattgatatcgccctttggaaattt
gaaactgccaagtactatgtgactatcatcgatgctccgggacacagagatttcattaag
aacatgatcactggtacgtctcaggccgactgtgcagtgttgattgtggctgctggtacg
ggagaattcgaagctggtatttccaagaacggtcagacccgtgagcacgcactacttgcc
ttcaccctcggcgtcaagcagctcatcgttggtgtcaataaaatggactccactgagccg
ccatactcggaggctcgtttcgaggaaattaagaaggaagtttcctcctatatcaagaag
attggttacaccccagctgctgtcgctttcgttcccatctcaggatggcacggagacaac
atgctcgagccctcgagcaagatgccatggttcaagggatgggccgtcgaacgcaaggaa
ggcaaagctgatggaaagtgtctcattgaggcactcgatgccatcctcccacccagcaga
cctaccgataaggctctgcgtcttcccctgcaggacgtttacaagattggaggtattgga
acggtgcccgtaggccgtgtagaaactggagttctgaagccaggtaccgtcgtaaccttt
gctccagcaggtctcacgactgaagtaaaatccgtcgagatgcaccacgaggctttgact
gaagccgtacccggcgacaacgttggtttcaacgtaaagaacgtttccgtcaaggaactt
cgtcgtggatacgttgccggtgactctaagaacaatccgcccaagggcgccgccgatttc
accgctcaggtaatcgtgttgaaccaccccggtcagatcagcaacggttatacgccagtg
ttggactgtcacacggcacatatagcgtgcaagttcgccgagattaaggagaaatgcgac
cgacgtacgggtaaaacgactgaggagaatccaaaggcgataaagtcgggagacgcggcc
atcgtgactctggtgccgagcaagccgatgtgcgtcgaagccttccaagaattcccgcca
ttggggcgcttcgctgtgcgtgacatgcgtcagactgtcgctgtcggtgttatcaaggca
gtcagcttcaaggatgccacaggcaaagtcaccaaggccgccgagaaggcacagaagaag
aaataa
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