Neodiprion lecontei (redheaded pine sawfly): 107227016
Help
Entry
107227016 CDS
T09006
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X2
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107227016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlo02000
]
107227016
Transporters [BR:
nlo02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
107227016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
TRI12
CdpA_N
Motif
Other DBs
NCBI-GeneID:
107227016
NCBI-ProteinID:
XP_015523510
UniProt:
A0A6J0CAS6
LinkDB
All DBs
Position
1:complement(1672270..1676417)
Genome browser
AA seq
569 aa
AA seq
DB search
MSGTCLFPKSLVTMDTEEKWHICYTEKSERPKDESVEFDRAIILCGYGKYHYELVLLCGL
IFMSAGFQNGLNAYILPSAACDLQLSSEEKGLLNVAFLAGGTSSAMLWGIIADVFGRKNI
LLGTLIADGTITIISSLSQSFQTLFVFRFLNGFVIGAPGCLVFSYLGEFHAEKQRAKSIC
YVGFFFTLAWLVLPGLAWAIIPMTFELRINGLQFNSWRLFVALVGIPTVISGILLIRFPE
SPKFLVSQGKSKEALKILRGIFVANTSHSIHDYPVKTLLANDTAIVNEEASIEKSKFGIT
QLLQSIWKQICYLFTPPLLKYAVLFSIMLFANMFGYYGLGLWLPELFNRFETYYKLHPNT
TVTVCELATFSVPANPLAEAITQTQNVILVGNSTASNDILKGIPCSGTIDEQVFVNTLTV
NAVSLLGNVASGYLADRLGRRTMPVGTMVFAGVFGCSIYFLRSASQNLIVACLFSTFIAT
GNTVLNSVIVDIFPTHVSAMAICLATLSGRIGAIASNLLFGLLLDINCGVPIFLVGGVVI
FGGLLGFLIPKKGVITNKYCDNNMAVASA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaacttgtctcttccctaaaagtctcgtcacaatggacacggaagaaaaatgg
cacatctgttacactgaaaaatcggaaaggccgaaggatgaatctgtagaattcgacagg
gcgattatactatgtggatacggaaaatatcactacgagctcgtccttctctgcggtttg
atcttcatgtcagctgggtttcagaatggtctgaatgcctacatactgccatcagcagca
tgcgacctccaattgtcatcggaggaaaagggactgcttaacgtagcttttttggccggt
ggaacttcgagcgctatgctctggggtatcatcgccgacgtatttggcaggaagaatatt
ttgctgggcactttaatcgccgatggaaccatcaccatcatatcaagcctctcgcagagc
tttcaaactctttttgtcttccgatttctcaacggcttcgtgattggcgcacctggatgt
ctcgtattttcatacctgggtgaattccacgcggagaaacaacgcgcgaaaagcatatgc
tacgtcggtttcttcttcactttggcttggctggtgcttccaggattggcttgggcgata
ataccgatgaccttcgagcttcgaatcaacggtctgcagttcaattcctggcgattgttc
gtcgcccttgtcggtatcccgaccgtaatcagcggcattctgcttatacgattcccggag
agtccaaagttcctagtttcccaagggaagtctaaggaagccttgaaaattctgcgtggt
atattcgttgcgaatactagtcacagcattcacgattatccggtgaaaacactcctggct
aacgatacggcgatcgtgaacgaggaagccagcatcgagaagagcaaattcggcattacc
caacttctgcaaagcatctggaagcagatttgctacctcttcacgcctccgctcctcaag
tacgcggttctcttctcgatcatgctcttcgccaacatgttcgggtactacggccttggt
ctgtggctgccggagctgttcaaccgcttcgagacgtactacaagctgcacccgaacacg
accgtgaccgtctgtgaattggccaccttctcggtcccggcaaatccgttggccgaagcg
ataacccagacgcaaaacgtcatcctcgtaggaaacagcaccgcctcgaacgacatcctt
aagggaatcccctgcagcgggaccatcgacgagcaggtcttcgtcaacacgttgacggta
aacgcggtgagcctcctgggtaacgtggcttccggctacctcgccgatcgccttggccga
cgaacgatgccagttggcacgatggtgttcgccggtgtcttcggctgctcgatatacttc
ctcagatcggcatcccagaacctgatcgtcgcctgcctcttctcgactttcatagcgact
ggtaacacggtcctgaacagcgtgatcgttgacatttttccgacgcacgtcagcgcgatg
gctatttgtttggctacgttgtcgggaagaatcggcgccatcgccagcaatctcctcttc
ggtttactcctcgacattaactgcggtgtcccgatattcctcgttgggggtgtagtcata
tttggcggactgttgggctttcttataccgaaaaaaggagttataacgaataaatattgt
gacaataatatggccgttgcatcggcctag
DBGET
integrated database retrieval system
