Neodiprion lecontei (redheaded pine sawfly): 107227096
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Entry
107227096 CDS
T09006
Name
(RefSeq) pumilio homolog 2 isoform X2
KO
K17943
pumilio RNA-binding family
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
107227096
NCBI-ProteinID:
XP_015523628
UniProt:
A0A6J0CAI2
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Position
4:complement(23872724..23980087)
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AA seq
1240 aa
AA seq
DB search
MKWLPGGGGEPAPPMQLHHPSANGHIPTEAEQCAQIMAGGDGVRIQSGQIAQMGIGRTQD
DATVGYVFQRPTEQDFIPQTSSYQTKQPARAWALADDAIIDNNHDKWKYPMTKLGIPQQS
QPQQLGLQTMNNVHLPYELHTMQLKSGGPGAEHLVYLNNQMAPQHQVALYHHQQQQQQQQ
QQQQQQQQFRNGQIAPSAKKLWGVDEGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDNA
VSQPISMGTGRRATGYHHHTSEVGAVLSPRGSETGGLGVKMVEYVLGSSPTTPKDLEPRM
GSLRLNTDGDKKEKEKGSASPFDGSKDDNGPQGNGLGPQNGLDDDKGFNRTPGSRQPSPG
EEDFQKNVSATLAVSTGAGGVVLLKQGIDVVGTEEHFMTAFGPAPHLQHHQAPPAHHLPH
PHSHAAQLFSAQGPPPQQGPPPQQQQQQQQQQQQGPPQPQDTATHFDVQQLFRSQQQAAT
PQQLQLLQQQQQQQQQQQYLAASQAQQQQQQQQNFPTAPYAVISGQEPYVGALITGAPPV
VPQYYGVAPWVYPAGLLPQAPPQAAAPPPPRRPLTPSSAAAAAVAAQDTANNLAQTVQGQ
YQVIPAYYDQNGSIVMGGVRGLGSAATPMRLVSPAPVLVNRAPSQPQPGPPAPPPPSLYS
QPTPTSHSNATPGECLGLACSAAAAVVQAQAVAVQQAQQQGSGLAAGLAALGYGGSPLGA
LGSPAQLQSTGLGLGASSTGRRDSFDRNTSAFSPSLEYSRAKWPQSYGALGTVTASPSPL
GLSLTPPPALGGSLGGLVGGASRVSAAPGAEAKFRASAVPALTANGVFGSSSSLFPTLVG
KPGRSGATGVGDKGAGGRSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLE
RASAAEKQLVFQEILASAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQ
MYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIG
AFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQELHSATDQLIQDQYGNYVIQHVLE
HGKPEDKAQLIESVRGKVLALSQHKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNV
MMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYGKHIIVKLEKFFMKTASA
MGVTTPSGTSTGAGDLGPIGPPASTAGSVSTQAQQPTQVL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctacccggaggcgggggcgaaccggcaccccccatgcagctgcatcacccc
tctgccaacggccacatacccaccgaggcagaacaatgcgctcaaattatggcaggtggc
gatggggttcgtatacaatctggacaaatcgcccaaatgggtatcggcagaactcaagat
gatgcgaccgttggttacgttttccagagaccaacagaacaggacttcattcctcagact
tcgagctatcaaactaagcagccagccagggcttgggcccttgccgacgatgccattatc
gataataaccatgacaagtggaagtatccaatgactaaactaggcatacctcaacaaagc
caacctcagcagcttggcttgcaaaccatgaacaatgttcatctaccctacgagttgcac
accatgcaactgaagagtggtggtccaggggcggagcatttggtatatctgaacaatcag
atggcgccgcagcatcaggttgctctgtatcatcaccagcagcaacagcaacagcagcaa
caacaacagcaacagcaacagcaattcagaaatggccagatcgctccctcggcaaaaaaa
ctttggggcgtcgatgaaggcgggtctaaagatgaggggggagtcaaaggcggtgggata
cttcacctgggagatcatcagatgtggcgcgattctacctggagtacgtcagacaatgca
gtttcgcaaccgatctcaatgggcactggaagacgtgctaccggataccaccaccacact
tccgaggttggggcggttctcagccctagaggcagcgaaaccggaggtcttggcgttaaa
atggtcgagtacgttctgggatcaagtcccaccaccccaaaagacttggagcctcgaatg
ggttccctgagattgaacacggacggagacaaaaaagagaaagagaagggttcggcgagc
cccttcgatggttctaaggacgacaacggaccccagggcaatggactgggcccccaaaat
ggccttgacgatgacaaaggatttaatcgcacgccgggtagcagacagccttcgccaggg
gaggaggacttccagaagaatgtatctgctaccctcgctgtgtcgacgggagctggaggc
gtcgtgctcctgaaacaggggatcgacgtcgtcggtaccgaggaacacttcatgacggcc
ttcggtccggcccctcacctccagcatcatcaggcccccccggcccaccacttacctcat
ccacattctcacgccgctcaattgttcagcgcccagggtccaccgcctcaacagggtccg
cctcctcagcaacagcagcagcaacagcaacagcaacaacaaggtcctccccagccacag
gacaccgcgacacattttgacgtccagcaactcttccgcagccaacaacaagcggcgaca
ccccaacaacttcagctgctacagcagcagcagcagcaacaacagcagcaacaatacttg
gcagcatctcaagcgcaacagcagcaacaacaacagcaaaatttcccaactgctccttac
gcagtaatcagtgggcaggagccttacgtaggggcattgatcactggagcaccacctgtt
gttccccagtattatggagtcgcaccttgggtctatccagcaggtctcctgccacaagct
ccgccacaagccgctgctccaccacccccgaggagacccttgacaccctcttcggctgct
gcagctgctgtcgctgctcaggacactgcaaacaacttggctcaaacggttcaaggacag
tatcaggtgatacctgcttactacgatcaaaatggatcaattgttatgggaggcgttcgc
ggactgggatcagctgcaactccaatgagattagtcagtccagcacctgttcttgttaac
agagcaccatctcaacctcagccaggtcctccggcgcctccaccgcctagtctatattca
caaccaactccaacatcgcatagcaatgcaacacctggagagtgtttaggtctggcgtgc
agtgcagcagctgcagtggttcaggcacaagcagttgccgtgcaacaagcacaacaacaa
ggctctggattagctgctggcttagcagcactagggtatggtggatccccgctaggtgcg
ctggggtctcccgcccaactacagagtacaggattaggtcttggagcttcatctactggg
agaagggattccttcgatagaaacacgtcagccttcagtccaagtctcgaatacagtaga
gctaaatggcctcaaagctacggtgcacttggaacagtaacagcatcgccaagtcctcta
ggactatctttgacgccaccgccggctcttggaggttccttgggtggattggtaggaggt
gcaagtcgtgtgtctgctgcccctggtgctgaggccaagtttagggccagcgcagttcct
gctttaacagctaacggtgtttttggatctagtagctcgctctttccaactttggtagga
aaacctgggcgcagcggagctaccggagttggagataaaggtgctggcggtcgttctcgt
ttgcttgaagatttcagaaataatcggtttccgagcttgcagttgcgtgatttagctaat
cacattgtggaattcagccaagaccaacatggttcaagattcattcagcaaaaactagaa
cgagcatctgctgccgagaagcagctagtatttcaagaaattttggcatcagcctattcc
ctgatgactgatgtatttggaaattatgttattcaaaagtttttcgaatttggtacaccc
gaacaaaaatctactcttgcccaaaaggtccgtggtcatgtgctaccattggcattacaa
atgtatggttgccgtgttattcaaaaggcgttggaatctatcggccctgagcaacagcaa
gaaatcgtacgcgagttggatggtcacgttttgaaatgtgttaaggatcagaatggaaat
cacgttgttcagaaatgtatcgaatgtgtcgagcctcgcgctcttcaattcgttattgga
gcttttgctggacaggtatactccttgagtactcatccttacgggtgcagggtcattcag
cggatcctcgagcattgtactcctgagcaaacccaagggatcttacaagaactacactct
gctacggatcaacttattcaggatcagtacgggaattacgttatccaacacgtacttgaa
catggaaaaccagaagataaagctcagttgattgaaagtgttcgaggaaaagtgttggca
ttatctcaacataagtttgccagtaatgtggtggaaaagtgtgtaacacatgctacaaga
caagagcgagccgtgctaatagaagaagtttgcggctttaatgacaacgctttgaatgtt
atgatgaaggatcagtatgctaattacgttgtacagaagatgattgacgtggcagaacct
gcccaacggaaggtcttaatgcacaagattcggccgcatcttggaagccttcgcaagtac
acctatgggaagcacataatagtgaaacttgagaaattcttcatgaagaccgcgtctgcg
atgggtgttacaaccccgtctggcacctctactggagctggagatctcgggccgattggt
cctccagcctccactgctggttcagtttcaactcaggcccaacaacctactcaggtttta
taa
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