Neodiprion lecontei (redheaded pine sawfly): 107227118
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Entry
107227118 CDS
T09006
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03082
ATP-dependent chromatin remodeling
nlo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107227118
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107227118
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nlo01009
]
107227118
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107227118
03036 Chromosome and associated proteins [BR:
nlo03036
]
107227118
Protein phosphatases and associated proteins [BR:
nlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107227118
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107227118
SWI/SNF complex
107227118
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107227118
PBAF complex
107227118
SWI/SNF complex
107227118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
107227118
NCBI-ProteinID:
XP_015523653
UniProt:
A0A6J0CAK2
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All DBs
Position
3:complement(35642712..35644772)
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AA seq
369 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKSKKSMSWVPSL
PNSSHLDAVPQATPINRNRVHTKKVRTFPLCFDDTDPSANLENAAQQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETILED
QCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcattacgaacgtatggcgataagcctataagttttcaagttgaagaaaatggagaa
tattattgcatcggttcagaagtcggtaattatttgcgtctctttcgtggttctttgtac
aaaagataccctggcatgttcagaagatctataacaaatgacgaaagaaaaaaacttgtg
gaacttggtcttagtcaacatgttctcgcctccagcgtgtctttgttacgtgccagtgaa
gttgaagacattatagaaggcaatgatgataaatacaaggctgtttcggtccattcaacc
gaaccacctgctcctagggaaggaaaatctaaaaaatctatgtcctgggttccaagttta
ccaaacagctcgcatctcgatgctgtaccgcaagctacgcccattaatcgcaacagagtt
catactaaaaaagtcagaacttttcctctatgcttcgatgatacagatccatctgcaaat
ttagaaaatgctgctcaacaagaaatgcttgtcccaatacgtttggacatggaaattgaa
gggcaaaaacttagagatacttttacatggaacaagaatgaaagccttataacaccagaa
cagtttgcagaagtcttgtgtgacgacttggatctgaatcccttaacatttgtccctgct
atcgcacaagcaattagacaacaaattgaagcattccctcaagagactatcttggaagat
caatgtgatcagagagtcattattaagttaaatatccacgttggaaatacgtcattggta
gatcaagttgaatgggatatgtctgagaaagagaataatccagaaaaatttgcaatgaag
ctttgcgcagagttggggctcggaggagaatttgtcaccgccattgcttatagcgttaga
ggtcagttgtcatggcatcaaagaacatacgcattttctgaagcaccactgccaactgtt
gaagtaccatttagacctccttcagaagccgaccaatgggctcctttccttgagaccttg
actgacgcagaaatggaaaagaagatacgagatcaagacagaaacactcgacgaatgcgg
agattggctaatactacaccagggtggtaa
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integrated database retrieval system
