Neodiprion lecontei (redheaded pine sawfly): 107227230
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Entry
107227230 CDS
T09006
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107227230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107227230
Enzymes [BR:
nlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107227230
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107227230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107227230
NCBI-ProteinID:
XP_046586692
LinkDB
All DBs
Position
1:21916479..21946475
Genome browser
AA seq
1134 aa
AA seq
DB search
MGEMKSNDYNSLKRAEKFRKVAKHIEDKWKLVPAFLKGKGLVKQHIDSFNYFINVEIKKI
VKANEKVLSDADSLFYVKYLNVYIGTPDVEESFNVNRITTPHECRLRDLNYSAPISVDIE
YTRGNQRIIRNNLLIGRMPIMLRSSNCVLNNKSHFELAKMNECPHDPGGYFVINGQEKVI
LIQEQKLRNRIILEEDNKGCIVSSCNSSTHERKTKTNVVGKGGKYYMRHNIFQDDIPIVA
VFKAMGIVSDQEIMQLIGTEEEYMRRFSASLEECHTANVFTQDQAIRYLSNRRKQKRFPT
SKMGVVDEIKDILAINILSHVPVVDFNFKVKATYIALMIRKVMQGQIDKTLIDDRDYYGN
KRLELAGSLLSLMFEDLFKRFNWELKQIADKNIPKIKAAQFDIVKHMRQDQITNGLAFAI
SSGNWTIKRFKMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMM
CPSDTPEGEGCGLVKNLALMTHITTEVEEEPIIRLAYNLGVENVNILGGEEINNKNVYMV
FLNGNILGITKNYIRLVNVFRLLRRKAMINGFVSIYPQHHHRCVQICSDGGRLCRPYIIV
KDGESLVQQKHIEALKHGFKTFDDFLHEGLIEFLDVNEENDSSIAFNESQIEAGTTHLEV
EPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYNLVYPQAPM
VKSRTIELINFDKLPAGQNATVAVMSYSGYDIEDALILNKAAIDRGYGRCLVYRNAKCTL
KRYANQTYDRIMGPMIDSNSKKPIWKHEIIDNDGIAAPGEMVENKKVMVNKSMPAATMNP
VNPANVQTQPDYCDVPVLFKGSVPAYIEKVMVSSNADDAFLIKLLLRQTRRPEIGDKFSS
RHGQKGVTGLIVEQEDMPFNDLGITPDMIMNPHGFPSRMTVGKLIELLAGKAGVAEGKFH
YGTAFGGSKVEDVCEELVKHGYNYMGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDK
MHARARGPRAVLTRQPTEGRAKEGGLRLGEMERDCLIGYGASMMLIERLMISSDMFDVDV
CNTCGLMAYRGWCHSCQTSASISTISIPYSCKLLFQELQSMNIVPRLTLKNSGD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatgaaatcgaatgattacaacagtctcaaaagagctgaaaaattcagaaaa
gtagccaaacatatcgaggataagtggaagctcgtccctgcattcctcaaaggcaaaggc
ctcgttaagcaacacattgattcgttcaattatttcattaatgttgagataaaaaaaatc
gtcaaggcaaatgagaaagtattaagtgatgctgattccttgttctacgtcaagtacctg
aatgtttacattggcacaccagatgttgaggaaagtttcaatgttaatcgcataacaacg
ccacatgaatgtcgactcagggatctaaactattctgcacctatatcagtggacattgaa
tataccagaggaaatcaacgcatcattagaaataacttattgattggaagaatgcccata
atgttgcgtagttccaattgtgttctgaataacaagtctcacttcgagttggcaaaaatg
aatgagtgccctcatgatccgggtggttattttgtcataaatgggcaggaaaaggtgatt
ctgatccaagaacagaaattgagaaacagaattattctggaggaagataacaaaggttgt
attgtcagttcatgcaacagttccacccatgaacgaaaaactaaaacaaacgttgttggg
aaaggcggaaaatattatatgagacataatatttttcaagacgatattcctattgtagca
gtatttaaggctatgggcattgtatctgatcaagaaataatgcaactaataggaactgaa
gaagaatacatgagaaggttttcggcttcgttagaagaatgtcacacagcaaatgttttc
actcaagaccaagcaatcagatatttaagtaatagaagaaaacagaagcgatttcccact
agtaaaatgggcgttgttgatgaaataaaggatatcttggcaataaacatcctgtcacat
gttccggtagtagacttcaacttcaaagttaaagcaacttacattgcattgatgatacgt
aaggttatgcaaggccagattgataaaacgctaatcgacgacagagattattacggtaac
aagaggctggaattagctggttccctactgtctctcatgtttgaagatttattcaaaaga
tttaactgggagctcaaacaaattgcagacaaaaatattcccaagatcaaagcagcccag
tttgacatcgttaaacacatgaggcaagaccaaattacaaatggtttagcatttgctatt
tcttcgggtaattggaccataaaacggttcaaaatggaacgtcaaggtgtaacgcaagtc
ctttcaagattgtcgtatatatctgccctaggaatgatgaccagagtaaattcacaattt
gaaaaaacaaggaaagtttctggcccccgctccttacagccttcccaatggggaatgatg
tgtcctagcgatacgccagaaggagagggttgtggtttagttaaaaatctagcattaatg
actcacatcacaacagaggtggaagaggagccaattatcagactagcctacaatcttgga
gtagaaaacgtcaatattttgggaggtgaagaaataaacaacaaaaatgtgtacatggtt
ttcttgaacggcaatattctaggaattactaaaaattacatccgacttgtcaatgtattc
agattgttacgcagaaaggccatgatcaatggcttcgtttcaatatatcctcagcatcat
catagatgtgtgcagatatgttcggatggtggcagactgtgcagaccttatattatagtc
aaagatggagaatctcttgttcagcaaaaacacatcgaagcactaaaacatggtttcaaa
acgtttgacgacttcttgcacgaaggtctcatagaattcttagatgtgaacgaggaaaat
gatagctcaattgctttcaatgagtcccaaattgaagcaggaacgactcacttggaagta
gagccatttactttgctcggcgtttgtgctggcttagtgccatatcctcatcacaatcag
agtcctagaaatacatatcagtgtgctatgggtaaacaagctatgggaactataggatat
aaccagcgtaatcgcatagatacactaatgtacaatctggtttacccgcaagctccaatg
gtcaaatctaggaccatagaactgatcaatttcgataaactccctgctggacaaaatgca
acagttgcggtgatgtcctacagtggatacgacatagaggatgcgctaattttaaataaa
gcagcgattgacagaggttatggaagatgtttagtctacagaaatgctaaatgtacttta
aaaagatatgcaaatcaaacttacgatagaataatgggccctatgatagattcaaattct
aaaaaacccatttggaaacatgagataatagacaatgatggtatagctgcccctggagaa
atggtagaaaataaaaaagtcatggtgaacaaatctatgcctgcggcaacaatgaaccca
gtaaatcctgctaatgttcagactcaacctgattattgtgacgtaccagttctcttcaaa
ggatcagttccagcctacattgaaaaagttatggtatccagtaatgcggatgatgcattt
ttaataaagttgttgctacgacaaactagacggcctgaaattggtgataaatttagtagt
cgacatggacagaaaggtgtaacaggtttgattgtggaacaagaagacatgccattcaat
gacctaggtatcacaccagacatgatcatgaatccacatggatttccctcaagaatgaca
gtaggtaaactcatcgaattacttgctggcaaggctggtgtagctgaagggaaattccac
tatggaacagcgtttggtggttcaaaagtagaagatgtttgcgaggaattggtaaaacat
ggctataattatatgggtaaagattttttctactctggtattaccggggaaccacttcag
gcatatatatactctggtccagtgtactatcagaaattgaagcatatggttcaagacaag
atgcatgctcgtgctagaggaccaagagcagttttaacacgccagccaacagagggaaga
gctaaggaaggaggtttgcgcttgggcgagatggagagagattgcttaattggttatggt
gctagcatgatgttaattgagcgtttgatgatttcaagtgacatgttcgatgtcgatgta
tgcaatacgtgtggactaatggcgtacagaggctggtgtcatagttgccagacaagtgct
tccatttctacaatatccataccttattcatgtaaacttttattccaagagttacaatct
atgaatattgtaccaaggttaacgctgaagaacagtggtgactga
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